Commit Graph

5861 Commits

Author SHA1 Message Date
Grahame Grieve 5026ff3506 Fix invalid integer detection 2023-07-29 08:49:38 +10:00
Grahame Grieve c58703c63f Improved invariant checking 2023-07-29 08:49:27 +10:00
Grahame Grieve bd3d718256 Update obligation handling code for split definitions 2023-07-29 08:48:54 +10:00
Grahame Grieve 8a893ee793 update ICF importer to handle grouping levels 2023-07-29 08:48:09 +10:00
markiantorno 0165495626 Updating version to: 6.0.24-SNAPSHOT and incrementing test cases dependency. 2023-07-27 14:23:16 +00:00
markiantorno db5d2b07c3 Release: v6.0.23
## Validator Changes

* Update IPS versions for -ips parameter (and get it working again)
* fix up validation of constraints in differentials (wasn't always happening)
* add warnings when collection status isn't right
* Better information messages when CodeSystem.content = not-present
* Add character check in validator for illegal XML Unicode characters
* Fix path problem in NpmPackage (some simplifier packages couldn't be processed)
* Fix NPE validating codes in value sets with improper expansions

## Other code changes

* Add support for Liquid assign
* Switch to DateTime type for Android Support
* Code clean up: remove unused imports
* Fix JSON unicode encoding handling of chars <32 code points
***NO_CI***
2023-07-27 13:56:32 +00:00
Grahame Grieve a12a939f90 set up release 2023-07-27 22:34:50 +10:00
Grahame Grieve 3e7e189271 Merge remote-tracking branch 'origin/master' 2023-07-27 22:27:04 +10:00
Grahame Grieve df83868b56 release notes 2023-07-27 22:26:58 +10:00
Grahame Grieve 3acfd8a879 Remake example scenario changes 2023-07-27 22:17:31 +10:00
Grahame Grieve efa52981d5
Merge pull request #1365 from hapifhir/do-20230726-android-remove-timestamp
Remove usage of java.sql.TimeStamp
2023-07-27 22:00:04 +10:00
Grahame Grieve b9d6249d49
Merge pull request #1366 from hapifhir/2023-07-gg-fhirpath-fixes
2023 07 gg fhirpath fixes
2023-07-27 21:54:31 +10:00
Grahame Grieve 95d30dee24 more fixing r4b test cases 2023-07-27 21:03:32 +10:00
Grahame Grieve 4677f319cb Fix R4B liquid processor 2023-07-27 20:07:36 +10:00
Grahame Grieve 06c865badf Fix NPE validating codes in value sets with improper expansions 2023-07-27 17:50:42 +10:00
Grahame Grieve 774440d0a7 Fix path problem in NpmPackage 2023-07-27 17:50:08 +10:00
Grahame Grieve 4eff9a3b68 fix up validation of FHIRPaths in differentials, and add warnings when collection status isn't right 2023-07-27 17:49:57 +10:00
Grahame Grieve 6afb151dff Better information when CodeSystem.content = not-present 2023-07-27 17:49:03 +10:00
dotasek 50047af493 Switch to ZonedDateTime implementation get tests passing 2023-07-26 17:08:08 -04:00
dotasek f88dae6ab8 WIP tests 2023-07-26 10:43:54 -04:00
dotasek 07a697c653 WIP tests 2023-07-26 10:43:37 -04:00
Grahame Grieve a3c32d86a0 add support for Liquid assign + Fix JSON unicode encoding and add character check in validator for illegal XML Unicode characters 2023-07-26 12:32:51 +10:00
Grahame Grieve 7302f52879
Merge pull request #1363 from hapifhir/2023-07-gg-unused-imports
remove unused imports
2023-07-26 12:30:46 +10:00
Grahame Grieve 3eef08dab8 remove unused imports 2023-07-26 08:31:21 +10:00
Grahame Grieve 9705627916
Merge pull request #1362 from hapifhir/2023-07-gg-ips_parameter
fix -ips parameter and add -check-ips-codes parameter
2023-07-26 08:30:28 +10:00
Grahame Grieve 8568765e6d get tests passing 2023-07-26 07:38:34 +10:00
Grahame Grieve 2b2123a2cd Merge remote-tracking branch 'origin/master' 2023-07-26 06:41:45 +10:00
Grahame Grieve fefd1ad1d6 fix -ips parameter and add -check-ips-codes parameter 2023-07-26 00:59:02 +10:00
Mark Iantorno 27cbcc4e1f Updating test case dependency to v1.3.17
***NO_CI***
2023-07-25 14:36:38 +00:00
Grahame Grieve 52577a861c update IPS versions 2023-07-25 05:55:47 +10:00
Grahame Grieve 31a76447bd Merge remote-tracking branch 'origin/master' 2023-07-25 05:55:04 +10:00
Grahame Grieve 659da6367d update IPS versions 2023-07-25 05:54:27 +10:00
markiantorno 592fba54cc Updating version to: 6.0.23-SNAPSHOT and incrementing test cases dependency. 2023-07-22 17:06:10 +00:00
markiantorno b7fd3be910 Release: v6.0.22
## Validator Changes

* Add support for private NPM registries requiring authentication
* Don't check FHIRPaths on differentials - not enough type info to test reliably
* Fix bugs in FHIRPath handling of logical models
* Fix minor bugs in type handling for Logical Models and R3 Profile validation
* Remove spurious warning message validating CDA documents
* Add value set qa checking
* Fixes to validator for new CDA package (proper handling of logical model types)
* Fix up bi-di warning message
* Add provisional support for alternate codes
* Workaround ClinicalImpression definition problem in core spec
* Fix to get context variables right when running invariants + fix for parent not always being populated + check type in derived profiles
* Fix checking FHIRPath statements on inner elements of type slices
* Fix scan of naming systems (error validating namespaces)
* Fix issue checking invariant expressions in R5

## Other code changes

* FHIRPath in HAPI mode: Strip returned IIdType of qualifier, version, and resourceType
* Update R4 and R4B FHIRPath implementations for changes picked up in R5 usage
* Fix obligation rendering message
* Fix missing extensions when converting value set properties
* Fix type of x-unknown-code-system in $validate-code response
* Fix CDA validation test case
* Much work on TxServer test case framework + Update terminology server implementation and tests for changes to test cases
* OMOP Vocabulary and ICFImporter development
* Add OWASP dependency check (#1347), upgrade many packages, remove ShEx
* Add github action to upload results
* Remove unused javalin dependency, also generate html reports
* Added test case for ExampleScenario conversion (R4/R5) and significantly bulked up the conversion process
* Remove unneeded resources (#1346) (help16.png)
* Add test for setVsAsUrl parameter setting (#1345)
***NO_CI***
2023-07-22 16:41:19 +00:00
dotasek 2654e85df3
Implement private NPM server (#1337)
* WIP start adding NPM data.

* WIP 2 Testing against verdaccio npm

* WIP private npm package servers

* WIP2 add server type config

* WIP3 parse tarball url

* Fix package date parsing, start mocking server tests

* Add dummy package, assert authorization and content

* Add more tests

* Add serverType to settings test

* Ignore tgz files for bidi check

* tighter bidi ignore

* different ignore regex

* Make packageManagement settings, allow ignoring default package servers

* New tests + token authentication

* Manage 404s when configured servers don't have package
2023-07-22 11:01:36 -04:00
dotasek b62f9afc5a
Remove resourceType, version, and qualifier from FHIRPath id results (#1357)
* Breaking test

* Strip returned IIdType of qualifier, version, and resourceType

* Add fix to r4b

* Add fix to r5
2023-07-22 11:01:13 -04:00
Mark Iantorno b73111adf6 Updating test case dependency to v1.3.15
***NO_CI***
2023-07-22 14:57:26 +00:00
Grahame Grieve aeb628a1b7 fix typo 2023-07-22 22:09:22 +10:00
Grahame Grieve b1ab0c77c7 release notes 2023-07-22 22:00:38 +10:00
Grahame Grieve 804575fc77
Merge pull request #1358 from hapifhir/2023-07-gg-fix-fhirpath-r3
2023 07 gg fix fhirpath r3
2023-07-22 21:44:52 +10:00
Grahame Grieve bb4379f5dd fix bugs in type handling 2023-07-22 21:01:08 +10:00
Grahame Grieve 363045c1c8 Fix bugs in FHIRPath handling of logical models 2023-07-22 08:18:55 +10:00
Grahame Grieve 5a858949d4 Merge remote-tracking branch 'origin/master' 2023-07-21 21:18:42 +10:00
Grahame Grieve 6350d9743e Don't check FHIRPaths on differentials - not enough type info to test reliably 2023-07-21 21:18:38 +10:00
Grahame Grieve ce44ab27fe fix type of x-unknown-code-system 2023-07-21 21:18:10 +10:00
Grahame Grieve 672ebf0348 Fix CDA validation test case 2023-07-21 21:17:51 +10:00
Grahame Grieve 8980df2364 add value set qa checking 2023-07-21 21:17:12 +10:00
Grahame Grieve e324047735 Fix issue with type evaluation in R3 checking FHIRPath types 2023-07-21 21:16:48 +10:00
Grahame Grieve 4e8f0f0c0c
Merge pull request #1353 from hapifhir/2023-07-gg-context-fixes
2023 07 gg context fixes
2023-07-21 14:48:19 +10:00
Lloyd McKenzie b1e5a749ca Fixed errors with test case 2023-07-20 22:31:19 -06:00