6350d9743e
Don't check FHIRPaths on differentials - not enough type info to test reliably
2023-07-21 21:18:38 +10:00
ce44ab27fe
fix type of x-unknown-code-system
2023-07-21 21:18:10 +10:00
672ebf0348
Fix CDA validation test case
2023-07-21 21:17:51 +10:00
8980df2364
add value set qa checking
2023-07-21 21:17:12 +10:00
e324047735
Fix issue with type evaluation in R3 checking FHIRPath types
2023-07-21 21:16:48 +10:00
8cf086b203
update R4 and R4B FHIRPath implementations for changes picked up in R5 usage
2023-07-21 14:09:11 +10:00
d8e2e020af
fix failing tests
2023-07-21 12:41:56 +10:00
cf1b53bba0
Update terminology server implementation and tests for changes to test cases
2023-07-21 05:38:09 +10:00
93e1b3e4b3
fix missing extensions when converting value set properties
2023-07-21 05:37:16 +10:00
f52df7c0cc
Fix obligation rendering message
2023-07-20 08:21:51 +10:00
fc75c0ea6b
fix up bi-di warning message
2023-07-20 08:21:34 +10:00
616cf5fdb3
Add provisional support for alternate codes
2023-07-20 08:21:19 +10:00
274c49bde5
Workaround ClinicalImpression definition problem in core spec
2023-07-20 08:20:18 +10:00
38052a6e75
ICFImporter for staging support of ICF
2023-07-20 08:19:59 +10:00
3f67cbee9e
Merge remote-tracking branch 'origin/master'
2023-07-18 11:12:10 +10:00
4fb70ba1e8
other missed code
2023-07-18 11:08:57 +10:00
8c0539136c
suppress spurious error message
2023-07-18 11:08:09 +10:00
55c12301ba
remove shex
2023-07-18 11:06:06 +10:00
27961d3da5
Finish off OMOP Importer
2023-07-18 11:05:21 +10:00
ced714305d
Fix to get context variables right when running invariants + fix for parent not always being populated + check type in derived profiles
2023-07-18 11:05:06 +10:00
89d0f6f867
Remove weso shex ( #1352 )
...
* Bump shex dependency
* Bump jackson to 2.15.2
* Bump thymeleaf to 3.1.1.RELEASE
* Remove es.weso shexs_2.12 and ignored tests
2023-07-17 18:20:53 -04:00
bdb415cf8a
Bump thymeleaf to 3.1.1.RELEASE ( #1349 )
2023-07-17 16:35:28 -04:00
ceceb6c7d5
Bump shex dependency ( #1351 )
2023-07-17 16:35:00 -04:00
6c2c1b21f9
Remove javalin dependency ( #1348 )
2023-07-14 16:51:06 -04:00
c2cb2aaa21
Add OWASP dependency check ( #1347 )
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* Add owasp dependency scan
* Add github action to upload results
* Remove unused javalin dependency, also generate html reports
* formats instead of format
* Restore javalin dependency (make revert easier later if necessary)
* Set OWASP to run on PR plus better names for sarif upload
2023-07-14 10:56:40 -04:00
a91749760e
Create owasp.yml
2023-07-13 15:45:31 -04:00
8cf4a62f32
Remove unneeded resources ( #1346 )
2023-07-12 16:46:42 -04:00
6598c1d28e
Add test for setVsAsUrl parameter setting ( #1345 )
2023-07-12 16:16:09 -04:00
eef3ebc5f1
Merge pull request #1341 from hapifhir/2023-07-gg-r5-fhirpath-type-slices
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Fix checking FHIRPath statements on inner elements of type slices
2023-07-12 06:06:31 +10:00
ca2b26fc3b
Temporarily disable CodeQL ReDoS and overly-large-range ( #1344 )
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* Nudge to allow branch push
* Add codeql config
* Move codeql config around
* Move config file into init step
* Shuffle config-file index
* Change to correct query id
* Shuffle and switch to polynomial-redos
* Ignore both redos queries
* Ignore java/overly-large-range
* Add comment on exclude
2023-07-11 13:42:54 -04:00
5e30c0ee92
Fix checking FHIRPath statements on inner elements of type slices
2023-07-09 08:03:35 +10:00
c2e4b2090f
Merge pull request #1340 from hapifhir/2023-07-gg-r5-ns-support
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fix scan of naming systems
2023-07-08 23:20:02 +10:00
c174400e73
fix scan of naming systems
2023-07-08 22:08:36 +10:00
1384b143d9
Merge pull request #1339 from hapifhir/2023-07-gg-r5-invariants
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fix issue checking invariant expressions in R5
2023-07-08 22:07:10 +10:00
1f6912d3a6
fix issue checking invariant expressions in R5
2023-07-08 16:44:50 +10:00
6a187a9232
Updating version to: 6.0.22-SNAPSHOT and incrementing test cases dependency.
2023-07-07 12:36:19 +00:00
45ae02cf1d
Release: v6.0.21
...
## Validator Changes
* Fix up processing conditions in -watch mode
* Fixes for validating against logical models (for fixed up CDA core package)
* Better testing of extension context (when limited to profile)
* Fix handling of UCUM codes when no terminology server
* Report hints and warnings on some code validation that had been not reported
* Better validation of valuesets when checking derived profiles
## Other code changes
* Render reference identifier if there is one when rendering references
* Hide empty place holder column when rendering by profile
* Fix npe rendering extensions + improve base64 presentation
* OMOP terminology importer
* update SPDX code system in R4/R4B for support for not-open-source
* Fix up type handling for conversions between R4/R4B and R5 (OperationDefinition fix)
***NO_CI***
2023-07-07 12:10:05 +00:00
d6fdaeb308
set up release
2023-07-07 14:50:10 +10:00
9acd16e35a
clarify code
2023-07-07 14:43:16 +10:00
cacf6696cd
Merge pull request #1333 from DarthGizka/stability-fixes-20230630
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Fix typo in ValidatorUtils::readInteger(), fix accident-prone file list loop & exempt missing files from processing
2023-07-07 14:41:59 +10:00
99ff8b5ae1
Merge pull request #1336 from hapifhir/gg-202307-rendering
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Gg 202307 rendering
2023-07-07 14:36:01 +10:00
83fc639242
more fixing processing logical models
2023-07-07 10:17:48 +10:00
c6e68dc9c6
Fixes to validator for new CDA package (proper handling of logical model types)
2023-07-07 09:38:55 +10:00
9a48340b6c
render reference identifier if there is one
2023-07-07 05:01:16 +10:00
b46f968665
hide empty place holder column
2023-07-07 05:00:59 +10:00
0004e06a5d
fix npe rendering extensions + improve base64 presentation
2023-07-07 05:00:51 +10:00
2cb7c052af
OMOP importer
2023-07-05 07:23:47 +10:00
09b653d9ed
better testing of extension context (when limited to profile)
2023-07-05 07:23:32 +10:00
f77392199d
Add test for UCUM with no terminology server
2023-07-05 07:23:10 +10:00
4a85513acb
pick up missing hints and warnings on terminology fields
2023-07-05 07:22:46 +10:00
Grahame Grieve
dotasek
Grahame Grieve
markiantorno