Commit Graph

979 Commits

Author SHA1 Message Date
markiantorno 552ef55ada Release: v5.4.2
* Rolling back HAPI dependency so we can build and publish
***NO_CI***
2021-05-21 17:42:50 +00:00
Lloyd McKenzie 5d9b7f4d62 If there's an ampersand that doesn't actually have a closing semi-colon, the process eventually runs out of characters and then fails doing a charAt(0). Catch this issue and throw a useful exception. 2021-05-19 19:04:11 -06:00
markiantorno 5648f7a925 Updating version to: 5.4.2-SNAPSHOT and incrementing test cases dependency. 2021-05-19 18:42:31 +00:00
markiantorno 52169f00ba Release: v5.4.1
* update so I can push a new validator
***NO_CI***
2021-05-19 18:15:50 +00:00
markiantorno 41f2fe7626 MAGIC BUILD FIXING WIZARDY 2021-05-19 11:03:57 -04:00
jamesagnew 9b829d9714 Version bump to 5.4.0 for release 2021-05-18 16:55:09 -04:00
markiantorno f082ed15ee Updating version to: 5.3.15-SNAPSHOT and incrementing test cases dependency. 2021-05-14 15:05:25 +00:00
markiantorno d17a8da923 Release: v5.3.14
Validator:

* Added parameter -want-invariants-in-messages
* fix issue with dependencies on IGs that have uppercase in package IDs

Other Code Changes

* Fix displays for some codes in ConceptMap.relationship when rendering
* Add Publication Version to rendering context for future use.
***NO_CI***
2021-05-14 14:32:48 +00:00
markiantorno 857e504315 upping version for release 2021-05-14 09:37:04 -04:00
Grahame Grieve 1b1b564682 fix issue with dependencies on IGs that have uppercase in package IDs 2021-05-14 12:23:21 +10:00
Grahame Grieve cf859c9ed1 add new parameter for whether to include FHIRPath in invariant error messages 2021-05-14 12:21:28 +10:00
Grahame Grieve d4c25d56b5
Merge branch 'master' into gg_202105_03 2021-05-14 11:32:06 +10:00
Grahame Grieve 24152a2f92 resolve conflicts 2021-05-14 06:12:25 +10:00
markiantorno baf81057a8 Updating version to: 5.3.13-SNAPSHOT and incrementing test cases dependency. 2021-05-13 19:12:04 +00:00
markiantorno a20d84bf2b Release: v5.3.12
* Update core R5 code to v4.6.0 (breaking changes to questionnaire, concept map, and other resources that are less important to core)
* Fix compartment definitions of ListResource.source and subject for R3 and R4
* Snapshot generator: fix problem checking types on logical models
* Do not flag internal references as suspicious
* XMLParser allows passing a schema location
* XMLParser allows passing a schema location
* Issue 484 https://github.com/hapifhir/org.hl7.fhir.core/issues/484
* Adding Kotlin to the build process
* random cleaning up in convertors
* Adding version option to ignore bundle entry in conversion advisors
* Validator: Load code systems from known packages on the fly
* Validator: better handle invalid v3 dates
* Renderer: Render OperationDefinition.InputProfile and OutputProfile
* Important: Allow more valid schemas for Utilities.isAbsoluteUrl
* Validator: remove notes about extensible bindings if profile extensible binding is valid
***NO_CI***
2021-05-13 18:41:58 +00:00
Grahame Grieve 3cb51f88c8 fix overrun error reading invalid xhtml + fix loading problem on validation test 2021-05-13 22:51:01 +10:00
Grahame Grieve 4e173f4715 * Validator: Load code systems from known packages on the fly
* Validator: better handle invalid v3 dates
* Renderer: Render OperationDefinition.InputProfile and OutputProfile
* Important: Allow more valid schemas for Utilities.isAbsoluteUrl
* Validator: remove notes about extensible bindings if profile extensible binding is valid
2021-05-07 18:29:21 +10:00
Grahame Grieve b13b4932f9 XMLParser allows passing a schema location 2021-05-05 12:17:02 +10:00
Grahame Grieve 696c16740e Add tests for package name case insensitivity and handle illegal characters in package file names 2021-05-04 13:04:06 +10:00
Grahame Grieve 11a727b40f update R5 to 4.6.0 2021-05-04 09:03:13 +10:00
markiantorno fb6f420df0 Updating version to: 5.3.12-SNAPSHOT and incrementing test cases dependency. 2021-04-22 05:47:40 +00:00
markiantorno 33fffe28ff Release: v5.3.11
Terminology: Ensure that CVX uses tx.fhir.org, not UTG definitions which are wrong
Validator: Fix problems with Bundle validation for ids in collections and add additional search related validation
Validator: Remove check on ElementDefinition.id for R2B
***NO_CI***
2021-04-22 05:15:09 +00:00
Grahame Grieve 1c320586e5 Ensure that CVX uses tx.fhir.org, not UTG definitions which are wrong + Fix problems with Bundle validation for ids in collections and add additional search related validation + Remove check on ElementDefinition.id for R2B 2021-04-22 13:27:32 +10:00
markiantorno ba29b1907c Updating version to: 5.3.11-SNAPSHOT and incrementing test cases dependency. 2021-04-21 17:20:12 +00:00
markiantorno 3eb3788597 Release: v5.3.10
* Breaking Change: Fix issue where primitive elements with required bindings must have a value, but this wasn't be checked
* Fix bug with value set imports not working
* Fix bug with base definitions not working properly for logical models
* Better memory tracking for validator
* Get code generator compiling
***NO_CI***
2021-04-21 16:47:39 +00:00
Grahame Grieve 7d2df18fb9 Better memory tracking for validator 2021-04-21 17:40:42 +10:00
markiantorno ba18e1c11a Updating version to: 5.3.10-SNAPSHOT and incrementing test cases dependency. 2021-04-12 20:34:20 +00:00
markiantorno 265e2cebfe Release: v5.3.9
* fix R2B for checking resource IDs
* Properly check code validity when an expansion is provided, but the code system is unknown
* fix problem with R2B StructureDefinition transform
* Improve validator performance
* Add support for forthcoming release
***NO_CI***
2021-04-12 19:29:28 +00:00
Grahame Grieve 50642db412 Merge branch 'master' of https://github.com/hapifhir/org.hl7.fhir.core 2021-04-02 06:24:53 +11:00
Grahame Grieve 11f66836ed fix for R2B validation of resource ids, and problems validating codes 2021-04-02 06:24:43 +11:00
markiantorno 1b20105d01 Updating version to: 5.3.9-SNAPSHOT and incrementing test cases dependency. 2021-04-01 18:56:04 +00:00
markiantorno 2821883888 Release: v5.3.8
* adding fix for R4 when target profile is a reference, and that reference returns an empty list of target profiles
***NO_CI***
2021-04-01 18:25:42 +00:00
markiantorno 91e31e813f Updating version to: 5.3.8-SNAPSHOT and incrementing test cases dependency. 2021-03-29 08:04:39 +00:00
markiantorno 671a3bbfe9 Release: v5.3.7
Version Conversion:
* add test for Observation conversion from 10 to 40
* add procedures conversion form dstu2 to r4
* add medication conversion from dstu2 to r4
* add copy of extension field for Enumeration fieldtype by Resource.copy
* add default value to Medication Request during conversion from dstu2 to r4
* fix R2B/R5 ElementDefinition.type.code conversion

Other:
* minor fixes in code generators for R4B
* Fix null pointer exception in validator validating language codes
* fix issue with validating fixed values for primitive elements
* add utility to unzip file
***NO_CI***
2021-03-29 07:37:14 +00:00
Grahame Grieve 032b81a38e fix issue with validating fixed values for primitive elements 2021-03-29 17:26:12 +11:00
Grahame Grieve 494137f322 ping bild 2021-03-22 14:14:54 +11:00
Grahame Grieve 1ed13f2a2e add doco 2021-03-22 10:17:48 +11:00
Grahame Grieve f43769c6e5 Merge branch 'master' of https://github.com/hapifhir/org.hl7.fhir.core 2021-03-22 08:57:21 +11:00
markiantorno c119fdfa42 Updating version to: 5.3.7-SNAPSHOT and incrementing test cases dependency. 2021-03-19 23:40:41 +00:00
markiantorno e6b2b98ff9 Release: v5.3.6
* URI type issue temporary fix for github issue #240 (QA Error related Extension.url)
***NO_CI***
2021-03-19 23:09:48 +00:00
Grahame Grieve 2d31728d4f Don't use packages.fhir.org for R2B (hack) + R2B packing tool 2021-03-19 07:50:12 +11:00
Grahame Grieve dc767031e5 Merge branch 'master' of https://github.com/hapifhir/org.hl7.fhir.core 2021-03-18 09:32:30 +11:00
Tadgh 2f0677ab95 Add a builder method for fhirVersions 2021-03-17 15:55:35 -04:00
Grahame Grieve 5187fdd398 fix issues related to R4B generation 2021-03-12 06:28:56 +11:00
markiantorno 48a91c70af Updating version to: 5.3.6-SNAPSHOT and incrementing test cases dependency. 2021-03-10 15:15:06 +00:00
markiantorno 06a61930b2 Release: v5.3.5
* minor fixes in code generators for R4B
***NO_CI***
2021-03-10 14:40:44 +00:00
Grahame Grieve 7c48c0d66a
Gg 20201mar r4b 3 (#454)
* fix bug generating htmlized XML with no namespaces

* Add R4B support to FHIRVersions

* Add resource name mapping for DataRequirement

* R4B fixes

* release notes
2021-03-10 09:08:09 -05:00
Grahame Grieve 3d312a1863 fix bug generating htmlized XML with no namespaces 2021-03-06 08:57:44 +11:00
Mark Iantorno dfc59882ca
the validator front end needs these changes (#450) 2021-03-04 20:38:01 -05:00
markiantorno 0dc44571e6 Updating version to: 5.3.5-SNAPSHOT and incrementing test cases dependency. 2021-03-03 23:12:04 +00:00
markiantorno 7be165d2d2 Release: v5.3.4
* fix bug in profile validation
***NO_CI***
2021-03-03 22:40:23 +00:00
Grahame Grieve b252b56c31 fix bug in profile validation 2021-03-04 07:27:58 +11:00
Grahame Grieve 14dc86e3a2 Fix bug in profile validation 2021-03-04 07:27:11 +11:00
markiantorno 622ad5f207 Updating version to: 5.3.4-SNAPSHOT and incrementing test cases dependency. 2021-03-03 15:27:46 +00:00
markiantorno 078da2f71a Release: v5.3.3
* adding session ids to validator service
* fix R5 --> R4 conversion for ConceptMap equivalence default value
* fix issue with snapshot generation for logical models (CCDA)
* Define binding method extension
* Improve terminology validation error messages
* add additional validation on profiles around types (for logical models)
***NO_CI***
2021-03-03 14:56:38 +00:00
Grahame Grieve cd7a8d39e7 * Improve terminology validation error messages
* add additional validation on profiles around types (for logical models)
2021-03-03 13:30:58 +11:00
Grahame Grieve a51a8c003d fix issue with snapshot generation for logical models (CCDA) 2021-03-03 13:18:44 +11:00
markiantorno f08f4aec85 Updating version to: 5.3.3-SNAPSHOT and incrementing test cases dependency. 2021-02-18 23:31:07 +00:00
markiantorno 7e70adf819 Release: v5.3.2
* Rollback HAPI dependency to fix fat-jar for Validator-CLI
***NO_CI***
2021-02-18 22:57:43 +00:00
markiantorno 5cede7a6b0 Updating version to: 5.3.2-SNAPSHOT and incrementing test cases dependency. 2021-02-17 19:58:37 +00:00
markiantorno 86b0af4895 Release: v5.3.1
* add test for Observation conversion from 10 to 40
* add procedures conversion form dstu2 to r4
* add medication conversion from dstu2 to r4
***NO_CI***
2021-02-17 19:23:40 +00:00
jamesagnew 4d8b564504 Version bump to 5.3.1-SNAPSHOT 2021-02-17 07:31:19 -05:00
jamesagnew c1fca83a94 Version bump to 5.3.0 2021-02-17 06:59:11 -05:00
Lloyd McKenzie d0df12b85f Revert to current content on HAPI 2021-02-08 08:40:11 -07:00
Lloyd McKenzie b91b68d1a2 Merge branch 'master' of https://github.com/hapifhir/org.hl7.fhir.core
# Conflicts:
#	org.hl7.fhir.convertors/pom.xml
#	org.hl7.fhir.dstu2/pom.xml
#	org.hl7.fhir.dstu2016may/pom.xml
#	org.hl7.fhir.dstu3/pom.xml
#	org.hl7.fhir.r4/pom.xml
#	org.hl7.fhir.r5/pom.xml
#	org.hl7.fhir.r5/src/main/java/org/hl7/fhir/r5/conformance/ProfileUtilities.java
#	org.hl7.fhir.report/pom.xml
#	org.hl7.fhir.utilities/pom.xml
#	org.hl7.fhir.utilities/src/main/resources/Messages.properties
#	org.hl7.fhir.validation.cli/pom.xml
#	org.hl7.fhir.validation/pom.xml
#	org.hl7.fhir.validation/src/main/java/org/hl7/fhir/validation/instance/InstanceValidator.java
#	pom.xml
2021-02-08 08:22:58 -07:00
Grahame Grieve 82edacbde4
Merge pull request #434 from hapifhir/gg-2021-feb-1
Gg 2021 feb 1
2021-02-08 13:28:31 +11:00
Grahame Grieve ef3b8c1f0a Fix bug validating mime types without terminology serverBase (warning, not error)
Performance improvements in JSON metadata based parser
Add first round of supplement validation
improve error message on profile validation fail
fix NPE validating some slices
fix bug validating canonicals as part of choice data types
Adds special support for http://hl7.org/fhirpath/System.* types
fix bug matching slices in contained resources that have references to #
2021-02-08 09:40:25 +11:00
Grahame Grieve 5b8aec8a06
Merge pull request #410 from rajavpr/UnknownHostException
Fix for UnknownHostException
2021-02-08 06:56:23 +11:00
Grahame Grieve da563a6637
Merge pull request #411 from ahdis/oe_fhir-28413
[FHIR-28413]: noNamespace instead of default for Logical Models not having a namespace
2021-02-08 06:46:30 +11:00
markiantorno 82546c5764 Updating version to: 5.2.21-SNAPSHOT and incrementing test cases dependency. 2021-01-25 15:02:01 +00:00
markiantorno af05868a82 Release: v5.2.20
* Added OkHttp dependency to cli
***NO_CI***
2021-01-25 14:28:05 +00:00
markiantorno de30f3d212 Updating version to: 5.2.20-SNAPSHOT and incrementing test cases dependency. 2021-01-24 16:59:11 +00:00
markiantorno 5c4a309538 Release: v5.2.19
* added OkHttp dependency to validator to fix issue
***NO_CI***
2021-01-24 16:26:27 +00:00
markiantorno d13b5dce94 Updating version to: 5.2.19-SNAPSHOT and incrementing test cases dependency. 2021-01-21 23:50:48 +00:00
markiantorno fb6f25c24e Release: v5.2.18
* This is a test to see if triggering a change on a branch will still allow me to deploy to Sonatype
* This is a second test message
***NO_CI***
2021-01-21 22:05:34 +00:00
markiantorno b7b979dc1e upping version 2021-01-20 16:14:00 -05:00
Grahame Grieve ecc59f26a6
Merge pull request #418 from hapifhir/gg-r4b-work
Gg r4b work
2021-01-21 07:13:43 +11:00
Grahame Grieve 00410604d7 Improve validator error messages for bad json & turtle formats 2021-01-20 16:53:14 +11:00
markiantorno 8a69438532 Updating version to: 5.2.17-SNAPSHOT and incrementing test cases dependency. 2021-01-14 22:38:02 +00:00
markiantorno f815bc8fb8 Release: v5.2.16
Validation Changes:
* No change

Other code changes:
* update dependency on CQF framework
* Add primitive type factory
* minor changes to fix ContentReference issues
***NO_CI***
2021-01-14 22:02:50 +00:00
Grahame Grieve 026a958e39 fix build 2021-01-15 08:13:30 +11:00
markiantorno 564f8357d8 Release: v5.2.15
Validation Changes:
* No change

Other code changes:
* update dependency on CQF framework
* Add primitive type factory
* minor changes to fix ContentReference issues
***NO_CI***
2021-01-14 18:29:48 +00:00
Grahame Grieve 414640550e Merge branch 'master' of https://github.com/hapifhir/org.hl7.fhir.core 2021-01-14 12:21:52 +11:00
Grahame Grieve e0dabe6f33 fix profile generation issues 2021-01-14 12:21:33 +11:00
Mark Iantorno 33b55727a0
upping version to fix crash (#413) 2021-01-12 11:21:28 -05:00
Oliver Egger c16573962b noNamespace instead of default 2021-01-02 14:19:04 +01:00
Oliver Egger 101b1c7cde revert, but escape only < ' ' char 2021-01-02 13:08:01 +01:00
Oliver Egger 21479bffa7 don't escape umlaut in utf8 2021-01-02 13:08:01 +01:00
rajavpr 17d375b43e
Fix for UnknownHostException
Error connecting to build server - running without build (build.fhir.org)
java.net.UnknownHostException: build.fhir.org
	at java.base/java.net.AbstractPlainSocketImpl.connect(AbstractPlainSocketImpl.java:220)
	at java.base/java.net.SocksSocketImpl.connect(SocksSocketImpl.java:403)
	at java.base/java.net.Socket.connect(Socket.java:608)
	at java.base/sun.security.ssl.SSLSocketImpl.connect(SSLSocketImpl.java:285)
	at java.base/sun.security.ssl.BaseSSLSocketImpl.connect(BaseSSLSocketImpl.java:173)
	at java.base/sun.net.NetworkClient.doConnect(NetworkClient.java:182)
	at java.base/sun.net.www.http.HttpClient.openServer(HttpClient.java:474)
	at java.base/sun.net.www.http.HttpClient.openServer(HttpClient.java:569)
	at java.base/sun.net.www.protocol.https.HttpsClient.<init>(HttpsClient.java:265)
	at java.base/sun.net.www.protocol.https.HttpsClient.New(HttpsClient.java:372)
	at java.base/sun.net.www.protocol.https.AbstractDelegateHttpsURLConnection.getNewHttpClient(AbstractDelegateHttpsURLConnection.java:191)
	at java.base/sun.net.www.protocol.http.HttpURLConnection.plainConnect0(HttpURLConnection.java:1187)
	at java.base/sun.net.www.protocol.http.HttpURLConnection.plainConnect(HttpURLConnection.java:1081)
	at java.base/sun.net.www.protocol.https.AbstractDelegateHttpsURLConnection.connect(AbstractDelegateHttpsURLConnection.java:177)
	at java.base/sun.net.www.protocol.http.HttpURLConnection.getInputStream0(HttpURLConnection.java:1592)
	at java.base/sun.net.www.protocol.http.HttpURLConnection.getInputStream(HttpURLConnection.java:1520)
	at java.base/sun.net.www.protocol.https.HttpsURLConnectionImpl.getInputStream(HttpsURLConnectionImpl.java:250)
	at org.hl7.fhir.utilities.npm.FilesystemPackageCacheManager.loadFromBuildServer(FilesystemPackageCacheManager.java:645)
	at org.hl7.fhir.utilities.npm.FilesystemPackageCacheManager.checkBuildLoaded(FilesystemPackageCacheManager.java:631)
	at org.hl7.fhir.utilities.npm.FilesystemPackageCacheManager.getPackageIdFromBuildList(FilesystemPackageCacheManager.java:593)
	at org.hl7.fhir.utilities.npm.FilesystemPackageCacheManager.getPackageId(FilesystemPackageCacheManager.java:565)
	at org.hl7.fhir.validation.cli.services.StandAloneValidatorFetcher.resolveURL(StandAloneValidatorFetcher.java:87)
	at org.hl7.fhir.validation.ValidationEngine.resolveURL(ValidationEngine.java:1738)
	at org.hl7.fhir.validation.instance.InstanceValidator.checkPrimitive(InstanceValidator.java:1954)
2020-12-30 15:43:03 +05:30
markiantorno 3ab5444dca Updating version to: 5.2.14-SNAPSHOT and incrementing test cases dependency. 2020-12-24 05:15:27 +00:00
markiantorno 5f67b5bad0 Release: v5.2.13
Validator:
* More rules around URL validation, instead of just marking them as errors
* Don't report errors for extensible bindings when profiles apply required bindings

Other code changes:
* fix rendering issue with profile references
* only use c:\temp for logs if it's writeable
***NO_CI***
2020-12-24 04:44:49 +00:00
Grahame Grieve 3ba81328cc * More rules around URL validation, instead of just marking them as errors
* Don't report errors for extensible bindings when profiles apply required bindings
* fix rendering issue with profile references
* only use c:\temp if it's writeable
2020-12-24 13:21:30 +11:00
markiantorno 401b73c700 Updating version to: 5.2.13-SNAPSHOT and incrementing test cases dependency. 2020-12-18 13:38:06 +00:00
markiantorno fa2a8ad4e2 Release: v5.2.12
Validator:
* allow for URLs that are references to ISO standards (urn:std:)
* fix up validation of value set for code system and expansions
* fix up validation for R2B issues (value set references, profiled types)
***NO_CI***
2020-12-18 13:03:18 +00:00
Grahame Grieve c4db541d7e fix up validation for R2B issues (value set references, profiled types) 2020-12-18 22:45:39 +11:00
Grahame Grieve 836863e372 allow for URLs that are references to ISO standards (urn:std:) 2020-12-18 22:44:23 +11:00
markiantorno ff49147146 Updating version to: 5.2.12-SNAPSHOT and incrementing test cases dependency. 2020-12-15 13:19:59 +00:00
markiantorno 9084ea3881 Release: v5.2.11
Validator:
* fix bad eror message in german messages (issue 399)
* better error messages when FHIRPath discriminators are invalid
* clean up error messages

Other code changes:
* remove unnecessary (& problem causing) Fragment-Host from OSGi manifest
* move structuremap utilities to a package

***NO_CI***
2020-12-15 12:50:35 +00:00
Grahame Grieve 52fae6d285 #399: fix bad error message in german 2020-12-15 14:30:44 +11:00
Grahame Grieve e2a8581a3b improve error message for FHIRPath errors when slicing 2020-12-10 13:50:20 +11:00
markiantorno 55055fa3c4 Updating version to: 5.2.11-SNAPSHOT and incrementing test cases dependency. 2020-12-09 01:50:11 +00:00
markiantorno 0019153a26 Release: v5.2.10
Validator:
* Fix NPE reading results of batch code validation
* Validate that binding references are present, and are for value sets
* Fix output message when there's nothing to validate

Other Code Changes:
* fix for renderer on ElementModels rendering - follow contentReference
* fix for NPE rendering references to contained value setes in Questionnaires that don't resolve
* fix for NPE rendering parameters with no names
* fix for rendering bundles on ElementModels

***NO_CI***
2020-12-09 01:21:17 +00:00
Grahame Grieve 1532a038c9 Validate that binding references are present, and are for value sets 2020-12-09 10:06:20 +11:00
markiantorno c85cbf59aa Updating version to: 5.2.10-SNAPSHOT and incrementing test cases dependency. 2020-12-06 22:30:20 +00:00
markiantorno 6907a004be Release: v5.2.9
Validator:

* fix bug that meant validator was complaining abut unknown codes

Other code changes:

* fix rendering of documents
***NO_CI***
2020-12-06 22:00:23 +00:00
markiantorno 1651d3775c upping version to publish 2020-12-05 09:45:13 -05:00
markiantorno b6efb58dc8 Release: v5.2.8
Validator:

* fix bug that meant validator was complaining abut unknown codes

Other code changes:

* fix rendering of documents
***NO_CI***
2020-12-05 00:07:37 +00:00
Grahame Grieve 7de14f172e
Fix validation issues for StructureDefinitions (#396) 2020-12-04 16:11:52 -05:00
markiantorno 118c03590f Updating version to: 5.2.8-SNAPSHOT and incrementing test cases dependency. 2020-12-03 22:12:42 +00:00
markiantorno d4e5950dea Release: v5.2.7
Validator:
* Fix support for cross version extensions across the entire valdation rule set
* Improve security warnings about rogue HTML tags
* fix error messages on unknown URLs (not longer say 'not done yet')
* fix validation of profiles and target profiles in all versions (before R3 different rules)

Other code changes:
* fix error message suppression on tooling client
* Track code systems used in the context
* improve error messages when rendering bundles that are documents that aren't properly formed
* Process Markdown when rendering CapabilityStatement.rest.documentation
* Fix rendering of CanonicalResource.url

Quality of Life Improvements:
* fixed deployment issue where validator.cli and report packages were sometimes published during deployment
***NO_CI***
2020-12-03 21:36:56 +00:00
markiantorno 22e203bd13 bumping version to fix publishing issues 2020-12-03 09:45:35 -05:00
markiantorno ff00680f94 Release: v5.2.6
Validator:
* Fix support for cross version extensions across the entire valdation rule set
* Improve security warnings about rogue HTML tags
* fix error messages on unknown URLs (not longer say 'not done yet')
* fix validation of profiles and target profiles in all versions (before R3 different rules)

Other code changes:
* fix error message suppression on tooling client
* Track code systems used in the context
* improve error messages when rendering bundles that are documents that aren't properly formed
* Process Markdown when rendering CapabilityStatement.rest.documentation
* Fix rendering of CanonicalResource.url
***NO_CI***
2020-12-03 10:37:47 +00:00
Grahame Grieve 7d95b27c1f fix validation of profiles and target profiles in all versions (before R3 different rules) 2020-12-03 16:57:53 +11:00
Grahame Grieve d4b46e32bf Improve security warnings about rogue HTML tags 2020-12-03 12:56:28 +11:00
Grahame Grieve 2f69a6734c escape | in URLS for terminology service 2020-12-03 12:55:51 +11:00
markiantorno 2dff99e99b Updating version to: 5.2.6-SNAPSHOT and incrementing test cases dependency. 2020-12-01 12:33:00 +00:00
markiantorno e83853b691 Release: v5.2.5
Validator:
* Add new validation to check these words in R3+: "Except for transactions and batches, each entry in a Bundle must have a fullUrl which is the identity of the resource in the entry"

Other code changes:
* Fix bug in package loader - allow loading version with later patch if old version is missing
***NO_CI***
2020-12-01 11:58:45 +00:00
Grahame Grieve 87e8f5a36a Add new validation to check these words in R3+: "Except for transactions and batches, each entry in a Bundle must have a fullUrl which is the identity of the resource in the entry" 2020-12-01 14:52:41 +11:00
Grahame Grieve 1e16f02b48 Fix bug in package loader - allow loading version with later patch if old version is missing 2020-12-01 14:51:19 +11:00
Grahame Grieve 65a17e6bd8 Merge branch 'master' of https://github.com/hapifhir/org.hl7.fhir.core 2020-11-30 06:53:26 +11:00
Grahame Grieve 9080a24c29 sync up 2020-11-30 06:53:15 +11:00
markiantorno 1c043b5cc5 Updating version to: 5.2.5-SNAPSHOT and incrementing test cases dependency. 2020-11-28 16:04:03 +00:00
markiantorno 9f3d6ccd4d Release: v5.2.4
* Removed logs from network calls
* Added back in help file display
* Avoiding checking ssl certs for build server, this needs to be fixed and should not be left in long term
***NO_CI***
2020-11-28 15:32:26 +00:00
Mark Iantorno 9913168321
Pay no attention to the man behind the curtain (#388)
* added back in help file, and removed network logging

* avoid checking ssl certs for build server

* fixing help file loading from cli jar
2020-11-28 09:47:19 -05:00
markiantorno 3e7bd73109 Updating version to: 5.2.4-SNAPSHOT and incrementing test cases dependency. 2020-11-27 16:34:04 +00:00
markiantorno 59843aaa49 Release: v5.2.3
Validator Changes:
* no effective changes
* fix issue for content references in versions before R3
* Add on the fly retrieval of profiles in the validator
* Fix bug where validator reported 'not done yet' for invalid contained references
* Fix for wrong reference to Any in cross version extensions

Other Code Changes:
* fix bug converting type mode in Structure Map
* fix bug converting Timing.when (issue 383)
* fix bug doing date time comparisons with seconds in FHIRPath
* Add support for instance-name and instance-description extensions
* Fix for bundle renderer trying to render resources from the wrong version

***NO_CI***
2020-11-27 16:04:33 +00:00
markiantorno 1466620418 version update so it publishes correctly. 2020-11-27 10:19:29 -05:00
Grahame Grieve d4087590bf
hopefully final prep for 5.2.2 (#387)
* Add on the fly retrieval of profiles in the validator, and fix bug where validator reported 'not done yet' for invalid contained references.

* fix loading issue for content references in versions before R3

* fix content resolution issue for versions from before 3

* Fix for bundle renderer trying to render resources from the wrong version

* Fix for wrong reference to Any in cross version extensions

* fix test case reference

* fix mistake generating snapshots around element ids

* fix tests
2020-11-27 09:20:49 -05:00
Grahame Grieve a6df87b0a4 version notes 2020-11-27 10:39:23 +11:00
Grahame Grieve 624ce59c83 Add on the fly retrieval of profiles in the validator, and fix bug where validator reported 'not done yet' for invalid contained references. 2020-11-27 10:34:43 +11:00
markiantorno 830e9e3cc4 Release: v5.2.2
Validator Changes:
* no effective changes

Other Code Changes:
* fix bug converting type mode in Structure Map
* fix bug converting Timing.when (issue 383)
* fix bug doing date time comparisons with seconds in FHIRPath
* Add support for instance-name and instance-description extensions
***NO_CI***
2020-11-26 07:41:03 +00:00
Grahame Grieve 40b644adf1 Merge branch 'master' of https://github.com/hapifhir/org.hl7.fhir.core 2020-11-26 06:50:35 +11:00
markiantorno 7adfefa635 Updating version to: 5.2.2-SNAPSHOT and incrementing test cases dependency. 2020-11-24 16:05:34 +00:00
markiantorno b7d683fe1b Release: v5.2.1
* Fix for issue 373
* Fix for issue 381
* Fix for issue 204
* Internal tools now use OkHttp library for all resource fetching
* Added testing for network tools
***NO_CI***
2020-11-24 15:33:30 +00:00
Grahame Grieve 666c3c7aad Merge branch 'master' of https://github.com/hapifhir/org.hl7.fhir.core 2020-11-24 06:29:53 +11:00
Mark Iantorno 9ffa3f7015
upping version number to correspond with latest HAPI NUMBAT release (#382) 2020-11-18 15:51:16 -05:00
Grahame Grieve b7d3f36f86 fix package loading issues 2020-11-18 21:05:16 +11:00
Grahame Grieve 4088dddaee fix bug where end of stream is read wrongly parsing XHTML (+ test case) 2020-11-14 08:17:48 +11:00
Grahame Grieve c6a2fb375c allow lazy loading of special packages 2020-11-14 08:17:14 +11:00
markiantorno f4ca5aebe5 Updating version to: 5.1.23-SNAPSHOT and incrementing test cases dependency. 2020-11-13 05:35:44 +00:00
markiantorno 10859ee2bf Release: v5.1.22
Validator:
* Fix bug in unknown URL handling that could cause significant delays in validation (>1min / unknown URL)
* fix bug in processing excludes with filters in value sets

Other code changes:
* fix case problem with icons in questionnaire rendering
* fix problem with rendering nested slices on content references
* fix rendering on must-support view for must-support on types and target profiles
***NO_CI***
2020-11-13 05:09:25 +00:00
Grahame Grieve 8c0523f3fa Fix bug in unknown URL handling that could cause significant delays in validation (>1min / unknown URL) 2020-11-13 14:36:10 +11:00
markiantorno e85f66fddb Updating version to: 5.1.22-SNAPSHOT and incrementing test cases dependency. 2020-11-11 02:03:27 +00:00
markiantorno 5b62d35f71 Release: v5.1.21
Validator:
* fix problem with min getting set to 1 on slices.
* fix problem with element definition resolution in profiles for contentReference
* don't apply warning about reference content when it's used as a pattern

Other code changes:
* fix problem with rendering unchanged terminology bindings in profiles
* fix problem rendering canonical URLs with | in them
* fix problem rendering multiple manifestations for an allergy reaction
* fix for NPE in version string comparison
* add styling when adding markdown to table
***NO_CI***
2020-11-11 01:31:53 +00:00
Grahame Grieve ef3e34ae01 * add styling when adding markdown to table
* don't apply warning about reference content when it's used as a pattern
2020-11-11 10:12:48 +11:00
Grahame Grieve f23114f901 * fix for NPE in version string comparison 2020-11-11 10:11:40 +11:00
Grahame Grieve 4e602b07e9 fix problem rendering multiple manifestations for an allergy reaction 2020-11-11 10:04:47 +11:00
markiantorno 1db9a028bf Updating version to: 5.1.21-SNAPSHOT and incrementing test cases dependency. 2020-11-05 05:40:28 +00:00
markiantorno 05056e643e Release: v5.1.20
Validator changes:
* (none)

other code changes:
* fix bug when converting positiveInt between versions
* fix bug raising error when processing bundles
* don't use prism for big binaries when rendering library
* fix parameters renderer to create proper anchors
* Don't render id/base/other properties of Resource itself in auto-narrative generator
* fix bug where extension values not generated for simple extensions
* fix bug rendering content references in profiles
***NO_CI***
2020-11-05 05:11:22 +00:00
Grahame Grieve ca48cf7f79 * Don't render id/base/other properties of Resource itself in auto-narrative generator
* fix bug where extension values not generated for simple extensions
2020-11-05 14:12:57 +11:00
markiantorno 7a3da4239e Updating version to: 5.1.20-SNAPSHOT and incrementing test cases dependency. 2020-11-03 18:45:02 +00:00
markiantorno a765efa343 Release: v5.1.19
* Release changes
***NO_CI***
2020-11-03 16:45:59 +00:00
jamesagnew 943bc7413c Add more tests 2020-11-01 21:09:11 -05:00
jamesagnew 0c01404a4f Improve numeric comparison 2020-11-01 21:09:11 -05:00
markiantorno b7661db83e Updating version to: 5.1.19-SNAPSHOT and incrementing test cases dependency. 2020-10-30 00:08:34 +00:00
markiantorno dcaa67ef1c Release: v5.1.18
Validator Changes:
* Mark it has an error if a JSON Array is empty
* Don't make wrong error reports for profiling resources in bundles
* fix bug checking unfixed values for HumanName patterns
* fix bug checking patterns (missed in some circumstances)
* fix bug checking type of resources in bundles
* improve messages around cardinality errors in profiles
* add parameter -html-output for enhanced presentation of slicing information

Other code changes:
* Render binding description in profile tables if it doesn't contain paragraphs
* fix bug with wrong value for contentReference in derived profiles (profiles do not and cannot change the value)
***NO_CI***
2020-10-29 23:41:20 +00:00
Grahame Grieve bc1d67db96 * fix bug checking unfixed values for HumanName patterns
* fix bug checking patterns (missed in some circumstances)
* fix bug checking type of resources in bundles
* improve messages around cardinality errors in profiles
2020-10-29 14:03:08 +11:00
Grahame Grieve 49fbc739fd improved markdown support in table generator 2020-10-29 14:00:21 +11:00
Grahame Grieve 4c421eefd7 * Render binding description in profile tables if it doesn't contain paragraphs
* fix bug with wrong value for contentReference in derived profiles (profiles do not and cannot change the value)
2020-10-29 13:56:56 +11:00
Mark Iantorno e1ecd06282
Validator 2 (#366)
* changes to accomodate front end gui for validator wrapper

* removing debug code
2020-10-19 16:39:22 -04:00
Mark Iantorno 36fa3a97af
Validator cleanup (#365)
* cleaning up validator class

* wip

* I left my debug code in
2020-10-16 10:44:01 -04:00
markiantorno 9bbb78e23d Updating version to: 5.1.18-SNAPSHOT and incrementing test cases dependency. 2020-10-14 20:03:52 +00:00
markiantorno 44f7dca1c7 Release: v5.1.17
Validator:
* revise error message when can't connect to the terminology server
* enforce constraints in root slicing definitions as well as in the slices
* Improve messages when no terminology server (-tx n/a)
* Validate Profile on type in profile - must be for the right type

Other Changes:
* Add Search Parameter renderer
* Add text separator system on XhtmlNode
* check supportsCopyright in a JUnit test
* turn off snapshot consistency checking by default

***NO_CI***
2020-10-14 19:30:23 +00:00
Grahame Grieve 1569532a1c Validate Profile on type in profile - must be for the right type 2020-10-14 13:21:50 +11:00
Grahame Grieve d20582ca9d revise error message when can't connect to the terminology server 2020-10-08 20:59:39 +11:00
Grahame Grieve cb25ef1bd1 Add text separator system 2020-10-08 20:59:10 +11:00
Grahame Grieve c82c71894f Add UTG version revision engine 2020-10-08 20:58:28 +11:00
markiantorno 1f583d6ba7 Updating version to: 5.1.17-SNAPSHOT and incrementing test cases dependency. 2020-10-01 04:37:43 +00:00
markiantorno ea0b4c0c1c Release: v5.1.16
Validator:
* Add date addition/subtraction to FHIRPath + add parsing comments
* Fix questionnaire mode parameter support for validator
* add extra debugging when valdiator can't fetch content to validate
* fix error setting up mapping log

Other code changes:
* rename org.hl7.fhir.utilities.cache to org.hl7.fhir.utilities.npm
* report error locations for run time FHIRPath errors
* add search on IG registry to PackageClient
* add focus to FHIRPath function extensions
* fix rendering of definitions in CodeSystems
* fix error rendering bundles in bundles
***NO_CI***
2020-10-01 04:12:17 +00:00
Grahame Grieve 3e6863ef70 Support for additional checking in IG Publisher 2020-10-01 11:05:24 +10:00
Grahame Grieve 77d33e8afa Fix comment parsing and add focus to FHIRPath function extensions 2020-10-01 11:04:34 +10:00
Grahame Grieve 2e8953a81d add search on IG registry to PackageClient 2020-10-01 11:00:31 +10:00
Grahame Grieve 46d1987cd0 refactor FHIRPath to report error locations for run time errors 2020-09-30 12:10:59 +10:00
Grahame Grieve 3f97d628ed release notes 2020-09-30 09:30:20 +10:00
Grahame Grieve 5be73ff9c5 rename org.hl7.fhir.utilities.cache to org.hl7.fhir.utilities.npm 2020-09-30 09:24:26 +10:00
Grahame Grieve bcb2d8e148 fix questionnaire mode support for validator 2020-09-30 09:23:54 +10:00
markiantorno afa46ebe7c Updating version to: 5.1.16-SNAPSHOT and incrementing test cases dependency. 2020-09-26 00:15:47 +00:00
markiantorno 5bb59c3b82 Release: v5.1.15
CI/CD:

* Restructured pom files
* Added profiles for deploying to both GitHub packages, and SonatypeOSS

***NO_CI***
2020-09-25 23:49:45 +00:00
markiantorno b7183f005c Updating version to: 5.1.15-SNAPSHOT and incrementing test cases dependency. 2020-09-24 20:45:19 +00:00
markiantorno 0d0caf3e84 Release: v5.1.14
Validator:
* Add new validation for must-support on types / profiles / targets + improve Extension validation

Other code changes:
* Ensure "I" flag in profile table representation is not used just for infrastructural constraints
* Render multiple values for properties in CodeSystems if they exist
* Fix for npe rendering resources based on profiles
* fix for use of "current" as version
* hack for past bad package URLs
* Add rendering for must support on types, profiles, targets
* add <code> when rendering turtle to HTML
***NO_CI***
2020-09-24 19:38:03 +00:00
Grahame Grieve b578cfbc0d
Gg v5114 b (#356)
* Ensure "I" flag in profile table representation is not used for underlying infrastructural constraints that exist everywhere

* render multiple values for properties if they exist

* fix for npe

* fix for use of "current" as version

* fix bad package URLs as they are loaded

* RELEASE_NOTES.md

* Add rendering for must support on types, profiles, targets

* Add new validation for must-support on types / profiles / targets + improve extension validation

* add <code> when rendering turtle to HTML

* RELEASE_NOTES.md

* fix notes
2020-09-24 14:06:36 -04:00
Grahame Grieve dfaefde01a add <code> when rendering turtle to HTML 2020-09-25 03:26:48 +10:00
Grahame Grieve 73d5a845bf Add new validation for must-support on types / profiles / targets + improve extension validation 2020-09-25 03:25:59 +10:00
Grahame Grieve b8370f7e61
various minor fixes (#353)
* Ensure "I" flag in profile table representation is not used for underlying infrastructural constraints that exist everywhere

* render multiple values for properties if they exist

* fix for npe

* fix for use of "current" as version

* fix bad package URLs as they are loaded

* RELEASE_NOTES.md
2020-09-22 16:17:45 -04:00
Grahame Grieve cc64eb7fea fix bad package URLs as they are loaded 2020-09-22 22:02:01 +10:00
Grahame Grieve 6fb4610b5f fix for use of "current" as version 2020-09-22 22:01:37 +10:00
markiantorno 5e3b51e286 Updating version to: 5.1.14-SNAPSHOT and incrementing test cases dependency. 2020-09-21 19:41:08 +00:00
markiantorno 268bb8cde7 Release: v5.1.13
Validator:
* No Changes

Other Changes:
* Various minor improvements to rendering code

***NO_CI***
2020-09-21 19:24:29 +00:00
Grahame Grieve 3c0b20eb16 Add quality code (yet to turn it on) 2020-09-22 02:34:04 +10:00
Grahame Grieve eba38941d3 fix resource leaks 2020-09-21 19:55:51 +10:00
Grahame Grieve 4a4105413f Improve Library rendering 2020-09-21 07:08:05 +10:00
markiantorno 4d2c81ede9 Updating version to: 5.1.13-SNAPSHOT and incrementing test cases dependency. 2020-09-17 15:26:59 +00:00
markiantorno afa239ae8b Release: v5.1.12
Validator:
* Fix handling resources in bundles when type is profiled
* Prevent NPE resolving resource in batch
* fix value set validation for primitive types when an expansion is provided, and the code system is not known

Other Changes:
* Package Subsystem - Support wildcars for patch version
* Renderer: Don't make a column for definitions in a code system if there are none
* Renderer: special case support for fr-CA language
* Renderer: Prevent NPE when auto-generating narrative and an illegal resource type is encountered
* FHIRPath Engine: correction for allowing  boolean conversion of primitive types
***NO_CI***
2020-09-17 15:08:40 +00:00
Grahame Grieve 75921b723b
Various fixes (#348)
* depend on 1.1.42-snapshot

* Don't make a column for definitions in a code system if there are none

* special case support for fr-CA language

* Prevent NPE when auto-generating narrative and an illegal resource type is encountered

* Prevent NPE resolving resource in batch

* fix value set validation for primitive types when an expansion is provided, and the code system is not known

* FHIRPath engine: correction for allowing  boolean conversion of primitive types

* Fix handling resources in bundles when type is profiled

* Add test cases for wildcard versions

* release notes
2020-09-17 09:52:05 -04:00
Grahame Grieve 0dcf64cb70 Add test cases for wildcard versions 2020-09-17 17:04:42 +10:00
Grahame Grieve 697b23e855 Merge branch 'master' of https://github.com/hapifhir/org.hl7.fhir.core 2020-09-17 16:48:45 +10:00
Grahame Grieve 9e066e637a
Merge pull request #340 from ahdis/oe_ig_dependencies_allowwildcardforpatch
add patch wildcard for ig dependencies
2020-09-17 16:48:19 +10:00
Grahame Grieve fa778fbf03 Fix handling resources in bundles when type is profiled 2020-09-17 15:45:47 +10:00
markiantorno a0573907bd Updating version to: 5.1.12-SNAPSHOT and incrementing test cases dependency. 2020-09-16 04:59:05 +00:00
markiantorno 9b07831809 Release: v5.1.11
Validator:
* No changes

Other code changes:
* Support lenient mode on FIHRPath when referring to polymorphics
***NO_CI***
2020-09-16 04:42:16 +00:00