Commit Graph

365 Commits

Author SHA1 Message Date
dotasek 0afea8dc1d
CLI Task to preload package cache (#1508)
* WIP start building preload task

* Slightly refactor exceptions

* sleep between each query

* WIP - FilesystemPackageCacheManager refactor

* Finish refactor

* Customize PackageVisitor

* Remove unused code

* Remove unused code 2

* Add debug logging for failing test

* Point withCacheFolder if to correct param

* Remove console chatter

* Rename to FilesystemPackageCacheManager.Builder

* Move logic to PackageCacheDownloader for re-use in other projects

* Fix spacing
2023-12-13 11:27:15 -05:00
Grahame Grieve 161e92d439 other code 2023-12-06 17:57:35 +11:00
Grahame Grieve 18c4419b9e refactor FHIRPath package 2023-12-01 15:13:33 +11:00
Grahame Grieve 516ec50afa Fix problem with profiled resources being called examples in IG publisher 2023-12-01 10:37:46 +11:00
dotasek c8f6f2fed1
Remove basic auth (unneeded) for AU connectathon test (#1503)
* Remove basic auth (unneeded)

* Disable test altogether

* Add reason for disable

* Actually, just disable in surefire
2023-11-29 16:39:53 -05:00
Grahame Grieve 36361eaa1d refactor timeout control on client 2023-11-24 12:06:18 +11:00
Grahame Grieve 1814a69826 Fix timeout issue in vsac 2023-11-24 08:46:23 +11:00
Grahame Grieve a86e3d2bdc ips builder fix 2023-11-24 07:05:50 +11:00
Grahame Grieve 6aaff35495 fhirpath iif() test case fixes 2023-11-22 07:52:47 +11:00
Grahame Grieve 2e19e6bbc1 IPS builder test case 2023-11-22 07:51:59 +11:00
Grahame Grieve ea9a498730 Infrastructure changes for IPS builder 2023-11-22 07:51:51 +11:00
Grahame Grieve 2f105d85ab Add first take on IPS builder 2023-11-22 07:51:26 +11:00
Grahame Grieve e009734d85 fix committee URLs 2023-11-17 07:10:02 +11:00
Grahame Grieve 9f8eeed5f6 more work on versioned API 2023-11-14 14:46:01 +11:00
Grahame Grieve b898cfe59f fix up VSAC import for large value sets 2023-11-14 11:59:29 +11:00
Grahame Grieve 618930e5bf Planning ahead: Add fhirVersion to R5 Base and IWorkerContext methods, and move IContextResourceLoader, ValidationResult and CodingValidationRequest out of IWorkerContext to their own clasess 2023-11-14 06:38:40 +11:00
Grahame Grieve 841de5657e vsac improvements 2023-11-06 20:23:17 +11:00
Grahame Grieve 809b2f68ea Fix broken links in code system rendering of parents 2023-10-31 16:57:25 +11:00
Grahame Grieve a327f0312e code clean up 2023-10-28 06:35:20 +11:00
Grahame Grieve e431770caf
2023 10 gg code gen (#1469)
* Revise FHIRPath API so hosts can evaluate expressions in custom functions

* Implement slice() function in validator

* more improvements to profile generation

* Fix issue where .resolve() in FHIRPath didn't work with URL values (and fix typo in i18n system)

* release notes

* Fix test ignore/exclude issues, bump test cases

---------

Co-authored-by: Grahame Grieve <grahameg@gmail.ccom>
Co-authored-by: dotasek <david.otasek@smilecdr.com>
2023-10-24 15:26:24 -04:00
Grahame Grieve 4917dd7815 fix typo 2023-10-12 20:12:43 +11:00
Grahame Grieve 31e3e5c9bb
Merge branch 'master' into 2023-10-gg-cda-fixes-2 2023-10-09 14:04:49 +03:00
Grahame Grieve d08039a3a7 fix issue in extension processing 2023-10-09 21:09:39 +11:00
Grahame Grieve f860af857d Fix conversion issue associated with ConceptMap.element.target.equivalence in versions previous to R5 (use proper extension URL, and move extension so it can be a modifier. And fix for modifierExtension handling) 2023-10-09 17:41:26 +11:00
Grahame Grieve 0140fa1ad1 fix merge issues 2023-10-06 05:59:39 +03:00
dotasek 66ecd24cad Fix merge 2023-10-05 09:55:14 -04:00
Grahame Grieve c52d5a71b4 Merge remote-tracking branch 'origin/master' 2023-10-05 15:22:10 +03:00
Grahame Grieve 0927f0bbfa fix birthDate editing 2023-10-05 15:21:23 +03:00
Grahame Grieve 752ab7a3d1
2023 10 gg cda parsing fix 2 (#1451)
* fix xml output to deal with namespaces properly

* Improve rendering or xml_no_order

* add command line demo app

* fix CDA parsing error for sdtc:raceCode

* Fix error message

* Bump test case version

---------

Co-authored-by: Grahame Grieve <grahameg@gmail.ccom>
Co-authored-by: dotasek <dotasek.dev@gmail.com>
2023-10-04 18:42:29 -04:00
Grahame Grieve 54dcbe8a9f add command line demo app 2023-10-04 18:36:52 +03:00
Grahame Grieve 272c3c1229 Get PE Mode compiling in R4 2023-09-27 18:49:45 +10:00
Grahame Grieve e18ba8a2e1 fix up removeChild in R4/R4B/R5 2023-09-27 09:52:34 +10:00
Grahame Grieve b11489f6ad better handling of errors from server for batches 2023-09-21 12:37:52 +10:00
Grahame Grieve a21b28bf3a Better handling of errors returned from tx.fhir.org 2023-09-20 11:09:33 +10:00
dotasek 82813a88d2 Fix system path for FileSystemPackageCacheManager 2023-09-05 15:35:21 -04:00
Grahame Grieve a78aa25c14 #1415 review system.out.println() statements 2023-08-29 19:21:45 +02:00
Grahame Grieve ac33590b96 #1412 - fix out of memory issues 2023-08-29 17:34:03 +02:00
Grahame Grieve 333ffc340e Accept-Language 2023-08-25 16:21:56 +02:00
Grahame Grieve 7eaa723ec9 rewrite the way language works in value sets 2023-08-25 13:09:36 +02:00
Grahame Grieve 32d1d8cad8 Hack utility for tx.fhir.org debugging 2023-08-22 21:46:25 +10:00
Grahame Grieve 2acf546059 Don't suppress exceptions in clients 2023-08-19 20:15:29 +10:00
Grahame Grieve 1d4eefa62b Rename implySystem to inferSystem per TI decision 2023-08-13 19:55:52 +10:00
Grahame Grieve 6041660e9b Improved error messages on server failure 2023-08-11 14:16:09 +10:00
Grahame Grieve 952dedd06b #1343 - addChild error in PEBuilder 2023-08-09 19:48:01 +10:00
Grahame Grieve 3eef08dab8 remove unused imports 2023-07-26 08:31:21 +10:00
dotasek b62f9afc5a
Remove resourceType, version, and qualifier from FHIRPath id results (#1357)
* Breaking test

* Strip returned IIdType of qualifier, version, and resourceType

* Add fix to r4b

* Add fix to r5
2023-07-22 11:01:13 -04:00
Grahame Grieve 4e8f0f0c0c
Merge pull request #1353 from hapifhir/2023-07-gg-context-fixes
2023 07 gg context fixes
2023-07-21 14:48:19 +10:00
Grahame Grieve 8cf086b203 update R4 and R4B FHIRPath implementations for changes picked up in R5 usage 2023-07-21 14:09:11 +10:00
dotasek 2f11af9bfa
Return HumanName getText() preferentially in getNameAsSingleString (#1355)
* Failing tests

* Return getText if it exists in HumanName
2023-07-18 12:22:53 -04:00
dotasek 8cf4a62f32
Remove unneeded resources (#1346) 2023-07-12 16:46:42 -04:00