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1642 Commits

Author SHA1 Message Date
Grahame Grieve c9b6ab4e64 Merge branch 'master' of https://github.com/hapifhir/org.hl7.fhir 2022-02-17 02:07:00 +11:00
Grahame Grieve 84f7133cf1 remove debugging statements 2022-02-17 02:05:02 +11:00
markiantorno 73baca035e Updating version to: 5.6.35-SNAPSHOT and incrementing test cases dependency. 2022-02-16 05:52:52 +00:00
markiantorno edd2c43e64 Release: v5.6.34 
## Validator Changes

* Improve code validation error when value set can't be supported on tx.fhir.org
* Hide error about regex in core package

## Other code changes

* Fix wrong URL links in processed markdown
* Don't let txCache errors stop the process
* Fix broken links in questionnaire +
***NO_CI***
 2022-02-16 05:32:34 +00:00
Grahame Grieve db19b0dd00 Fix broken links + remove error about regex in core package 2022-02-16 14:04:35 +11:00
Grahame Grieve 647d3efcee Merge branch 'master' of https://github.com/hapifhir/org.hl7.fhir 2022-02-16 13:15:19 +11:00
Grahame Grieve 0f1d9db24f Fix wrong URL links + txCache errors + questionnaire rendering at root 2022-02-16 13:14:55 +11:00
markiantorno 1d02e04edd Updating version to: 5.6.34-SNAPSHOT and incrementing test cases dependency. 2022-02-15 11:21:29 +00:00
Grahame Grieve fd36a5b0d2 Merge branch 'master' of https://github.com/hapifhir/org.hl7.fhir 2022-02-15 22:17:36 +11:00
Grahame Grieve c13193835e Preserve code validation error 2022-02-15 22:17:08 +11:00
markiantorno cf7415b33e Release: v5.6.33 
## Validator Changes

* no changes

## Other code changes

* Fix error access experimental on canonical
***NO_CI***
 2022-02-15 11:00:55 +00:00
Grahame Grieve 4983b0122c Fix error accessing experimental on NamingSystem 2022-02-15 19:32:04 +11:00
markiantorno e1613a7087 Updating version to: 5.6.33-SNAPSHOT and incrementing test cases dependency. 2022-02-14 06:57:10 +00:00
markiantorno 4a8aeda4e9 Release: v5.6.32 
## Validator Changes

* no changes

## Other code changes

* Fix NPE error in Patient renderer
***NO_CI***
 2022-02-14 06:25:49 +00:00
Grahame Grieve d91f6a450b Fix Patient Renderer 2022-02-14 16:23:22 +11:00
markiantorno 4ab3fea400 Updating version to: 5.6.32-SNAPSHOT and incrementing test cases dependency. 2022-02-14 01:27:51 +00:00
markiantorno 04bb17783e Release: v5.6.31 
## Validator Changes

* accept regex on ElementDefinition and ElementDefinition.type, and an error for regex on ElementDefintion.type (though core packages have it on the wrong place)
* fix handling of cross-version extensions on choice elements
* fix OID validation (accept 1.3.88 GTIN OID)
* only consider bindable types when checking for multi-type bindings

## Other code changes

* Fix definitions in ListResource ("List" not "ListResource")
* introduce fhir-tools-settings.conf (see https://confluence.hl7.org/display/FHIR/Using+fhir-tool-settings.conf)
* Rendering fixes & improvements for Questionnaire and Patient and partial dates
* improvements to relative link handling in markdown when generating snapshots
* updates to package tools for changes to package.json#type (see https://confluence.hl7.org/pages/viewpage.action?pageId=35718629#NPMPackageSpecification-Packagemanifest)
* fix semver handling for tags in versions
* Bump mockito and bytebuddy versions for Java 17 compatibility & fix Kotlin ref
***NO_CI***
 2022-02-14 01:08:37 +00:00
Grahame Grieve 6310b1158e #722 fix ListResource name misuse 2022-02-13 08:29:01 +11:00
Grahame Grieve b861ca4744 clean up 2022-02-12 09:07:07 +11:00
Grahame Grieve 7700a0cb11 missed rendering fix 2022-02-12 08:29:00 +11:00
Grahame Grieve e4d886dfec Fix handling of cross version extensions on choice types 2022-02-12 08:27:56 +11:00
Grahame Grieve fb1a08dca8 Rendering improvements: partial dates, questionnaire links, and patient renderer 2022-02-12 08:27:29 +11:00
Grahame Grieve 76ed4abba7 Changes for debugging on OSX (fhir-tools-settings.conf) 2022-02-12 07:55:59 +11:00
Grahame Grieve 0fa757b426 Fix markdown relative link issues + start working on additional bindings extension 2022-02-12 07:53:23 +11:00
Grahame Grieve b49e791cd1 Updates for changes to package.json type 2022-02-11 09:36:47 +11:00
markiantorno 045299ae7a Updating version to: 5.6.31-SNAPSHOT and incrementing test cases dependency. 2022-02-07 15:56:51 +00:00
markiantorno 7ee476a9b6 Release: v5.6.30 
## Validator Changes

* no changes

## Other code changes

* Use builders for SimpleWorkerContext and ValidationEngine to enforce initialization order for caches and capabilities
***NO_CI***
 2022-02-07 15:07:54 +00:00
dotasek 0e3e410ea1 Merge branch 'master' into simpleworkercontextbuilder 2022-02-04 09:50:42 -05:00
markiantorno 703f907289 Updating version to: 5.6.30-SNAPSHOT and incrementing test cases dependency. 2022-02-03 23:15:06 +00:00
markiantorno 9a89045bac Release: v5.6.29 
## Validator Changes

* no changes

## Other code changes

* Fix package location for CacheVerificationLogger
***NO_CI***
 2022-02-03 22:42:27 +00:00
dotasek e0bdbda5b7 Fix package location for CacheVerificationLogger 2022-02-03 16:35:26 -05:00
dotasek 239c436ca5 Code cleanup 2022-02-02 10:07:13 -05:00
dotasek 847ede5f88 Refactor SimpleWorkerContext and ValidationEngine 2022-02-01 15:28:19 -05:00
dotasek 5092be9a1d Clean txCache + update CacheVerificationLogger output 2022-02-01 10:09:23 -05:00
markiantorno c41fcf9fa9 Updating version to: 5.6.29-SNAPSHOT and incrementing test cases dependency. 2022-02-01 02:57:54 +00:00
markiantorno fe073b6a8a Release: v5.6.28 
## Validator Changes

* no changes
* Add ability to [compile a map file to a StructureDefinition](https://confluence.hl7.org/display/FHIR/Using+the+FHIR+Mapping+Language#UsingtheFHIRMappingLanguage-runtransformsjavavalidator)
* Add knowledge of additional R5 extensions for StructureDefinitions
* Fix problem validating extension context on choice types
* Add hint when binding found on element with multiple types
* Fix validator to guess system on all uses of code (not just most)

## Other code changes

* Use cached terminology server responses for unit and integration tests.
* Add more HTTP logging
* Clean up various issues with graphQL and polymorphic elements
* Add better support for date/time rendering
* Significant speed improvement for terminology caching
***NO_CI***
 2022-02-01 02:36:54 +00:00
Grahame Grieve 96538ba249
Merge pull request #704 from lmckenzi/Add_map_compile 
Add map compile
 2022-02-01 11:50:41 +11:00
Grahame Grieve cae92c8621
Merge pull request #727 from hapifhir/ja_20220130_graphql_cleanup 
Updates to GraphQL
 2022-02-01 11:49:10 +11:00
Grahame Grieve bac81752c8 merge and fix testing bugs 2022-02-01 10:20:56 +11:00
Grahame Grieve 4c48d597a6
Merge pull request #721 from dotasek/tx-server-cache-analysis 
TX Server Caching for Tests
 2022-02-01 08:09:41 +11:00
jamesagnew 180035d306 One more tweak 2022-01-30 18:37:22 -05:00
jamesagnew 846866472b Updates to GraphQL 2022-01-30 17:04:10 -05:00
Grahame Grieve 1aa1e288ec merge 2022-01-30 07:57:39 +11:00
Grahame Grieve 3559bd6638 fix tests problems with date formats and java versions 2022-01-29 09:16:48 +11:00
Jens Kristian Villadsen 7b24e9d4ee
Update FHIRPathEngine.java 
As mentioned on https://github.com/hapifhir/org.hl7.fhir.core/issues/703
 2022-01-28 20:44:39 +01:00
Grahame Grieve bd9d486846 Significant speed improvement for terminology cache 2022-01-29 06:06:20 +11:00
Grahame Grieve 42f75dfee0 #703 - fix missing .guessSystem() in opMemberOf 2022-01-29 06:05:51 +11:00
dotasek fdc6e02b49 Don't log requests when rebuilding cache 2022-01-26 09:31:58 -05:00
dotasek 39e30a10c4 Clean up comments 2022-01-26 09:28:19 -05:00
dotasek a41287a74d Additional logging for requests in test 2022-01-25 18:02:16 -05:00
dotasek 9ec63bc1b9 Test capability caching. 
Just when I think I'm done...
 2022-01-25 16:36:13 -05:00
dotasek 7c58619528 Testing Part 7 2022-01-25 14:43:13 -05:00
dotasek 38728f2c82 Testing part 6 2022-01-25 10:48:42 -05:00
dotasek b5e9a7aa1e Testing Part 5 2022-01-24 18:16:10 -05:00
dotasek 1715574a7e Testing Part 4 2022-01-24 17:00:17 -05:00
dotasek 33cdfffa55 More consistent version management in TerminologyCache 2022-01-23 13:21:40 -05:00
dotasek 97c11a9be0 Testing Part 3 2022-01-23 12:06:44 -05:00
dotasek 09ddd964ff Merge remote-tracking branch 'origin/master' into tx-server-cache-analysis 2022-01-21 17:39:51 -05:00
dotasek 6416ccce36 Testing Part 2 2022-01-21 17:39:43 -05:00
markiantorno f69a30421f Updating version to: 5.6.28-SNAPSHOT and incrementing test cases dependency. 2022-01-21 21:43:26 +00:00
markiantorno 90008b7744 Release: v5.6.27 
## Validator Changes

* no changes

## Other code changes

* Fix unnecessary JsonParser/XmlParser class load
***NO_CI***
 2022-01-21 21:12:00 +00:00
dotasek f9561f2685 Testing Part 1 2022-01-21 15:29:17 -05:00
jamesagnew 315604759c Another attempt to avoid parser classload 2022-01-21 14:59:50 -05:00
markiantorno 8818acfbf8 Updating version to: 5.6.27-SNAPSHOT and incrementing test cases dependency. 2022-01-21 16:20:40 +00:00
markiantorno b82cc42663 Release: v5.6.26 
## Validator Changes

* no changes

## Other code changes

* Avoid unnecessary JsonParser/XmlParser class load
***NO_CI***
 2022-01-21 16:02:59 +00:00
dotasek 7d8569e9e7 Test that no requests are made for cached tests 2022-01-20 13:28:47 -05:00
dotasek 4826424499 Make additional caches to cover NativeHostService and ValidationService 2022-01-19 18:36:39 -05:00
dotasek 0a3e9d3f31 Merge branch 'master' into tx-server-cache-analysis 2022-01-18 16:10:21 -05:00
dotasek d9d0f22ff3 cache CapabilityStatement and TerminologyCapabilities 2022-01-18 16:09:59 -05:00
jamesagnew 0ed91721b0 One more revert 2022-01-18 06:16:18 -05:00
jamesagnew bc3759dc03 Roll back change 2022-01-18 06:16:18 -05:00
jamesagnew d3007ea73f Cleanup 2022-01-18 06:16:18 -05:00
jamesagnew f902d1d273 Avoid reflection 2022-01-18 06:16:18 -05:00
jamesagnew 942d4f15aa Avoid unnecessary JsonParser/XmlParser class load 2022-01-18 06:16:18 -05:00
markiantorno 15fcc4607e Updating version to: 5.6.26-SNAPSHOT and incrementing test cases dependency. 2022-01-17 22:42:22 +00:00
markiantorno 4b808f140c Release: v5.6.25 
## Validator Changes

* no changes

## Other code changes

* fix bug where generated packages have files in the wrong places
* fix inclusion of Java constants in CLI help text.
* fix bug on `-compile` output when using 'current' version.
***NO_CI***
 2022-01-17 22:24:48 +00:00
Grahame Grieve 06e690e54f fix bug in package generator where files go in the wrong place 2022-01-18 07:30:12 +11:00
markiantorno 7823945213 Updating version to: 5.6.25-SNAPSHOT and incrementing test cases dependency. 2022-01-17 11:31:30 +00:00
markiantorno c2bcb08855 Release: v5.6.24 
## Validator Changes

* No changes to the validator

## Other code changes

* Improved rendering for value sets
***NO_CI***
 2022-01-17 11:13:36 +00:00
Grahame Grieve c13c291949 more work on value set renderer (designations, expand-groups) 2022-01-17 10:51:48 +11:00
dotasek bd74bf3cee Fix typos 2022-01-14 14:53:36 -05:00
markiantorno f368b021e3 Updating version to: 5.6.24-SNAPSHOT and incrementing test cases dependency. 2022-01-14 04:30:14 +00:00
markiantorno a536ceba7f Release: v5.6.23 
## Validator
* changes to profile comparison based on discussion at Jan 2022 connectathon
* fix FHIRPath handling for incomplete FHIRPath expressions

## Other code changes
* fix markdown related dependencies
* fix NPE in Utilities.pathURL()
* fix logging problem in tx server logging
* fix problem caching value sets during validation
* fix NPE setting locale based on canonical jurisdiction
* Improve rendering for Quantity/Range + return display when validating for rendering purposes

***NO_CI***
 2022-01-14 03:58:44 +00:00
dotasek 6e0b14b0b6 Merge branch 'master' into tx-server-cache-analysis 2022-01-13 09:46:45 -05:00
Grahame Grieve 554a458b57 fix up logging problem 2022-01-13 17:38:39 +11:00
Grahame Grieve 758c2ebe7b fix caching problem for value sets doing validation 2022-01-13 17:36:15 +11:00
Grahame Grieve 4566035d85 fix issue generrating profile comparison 2022-01-13 17:26:30 +11:00
Grahame Grieve a764269611 update comparison of element cardinality based on discussion at Jan 2022 connectathon 2022-01-13 05:15:33 +11:00
Grahame Grieve c661dae9f5 fix NPE setting locale 2022-01-13 05:14:36 +11:00
Grahame Grieve 7d3f34b0ca fix error in FHIRPath handling for incomplete FHIR Path expressions 2022-01-12 17:44:11 +11:00
Grahame Grieve ecad7cc5f8 Fix issue with comparer not rendering properly and add explicit checks around cardinality 2022-01-12 17:43:39 +11:00
Grahame Grieve 73737b5b4c
Merge pull request #706 from lmckenzi/IntroChanges 
Changes relevant to improving the rendering of artifact intros.  Spec…
 2022-01-12 03:44:03 +11:00
Lloyd McKenzie 3a98e0b5fa Add code system if no unit and not UCUM. 2022-01-11 08:24:33 -07:00
markiantorno b08691b425 Updating version to: 5.6.23-SNAPSHOT and incrementing test cases dependency. 2022-01-11 00:07:58 +00:00
markiantorno 8a933094b1 Release: v5.6.22 
* fix bug for NullPointerException in Bundle convertors when resource is not available.
* fix Java locale backward compatibility in surefire
***NO_CI***
 2022-01-10 23:53:00 +00:00
Lloyd McKenzie d5ed9eefbd Fixed spacing with non-breaking spaces issue 2022-01-10 12:41:54 -07:00
Grahame Grieve 6b5f43df9b fix rendering problem 2022-01-11 05:48:15 +11:00
Grahame Grieve cec1a365ec add missing file 2022-01-10 20:50:19 +11:00
Grahame Grieve 0bb4628f6b fix NPE in validator & rendering fixes: concept map display + name rendering issue for Med Resources + fix locale date issue 2022-01-10 20:29:06 +11:00
dotasek 5635d96576 Configure error cacheing at code level + create profile for cache clean 2022-01-07 12:01:46 -05:00