Commit Graph

1240 Commits

Author SHA1 Message Date
Grahame Grieve 481698cf24 Fix up terminology tests to ignore irrelevant extensions 2023-06-12 17:17:30 +01:00
dotasek ff7997d7d2
Fix older jetbrains annotations transitive dependency (#1299) 2023-06-09 14:43:49 -04:00
markiantorno 8237fb862b Updating version to: 6.0.16-SNAPSHOT and incrementing test cases dependency. 2023-06-08 21:23:36 +00:00
markiantorno cc14a4142f Release: v6.0.15
## Validator Changes

* no changes

## Other code changes

* Update commons-beanutils and apache.poi dependencies
***NO_CI***
2023-06-08 20:56:04 +00:00
dotasek 05134dc99d
Do 20230607 commons beanutils bump (#1297)
* Move property to module

* Document dependency exclusions, RELEASE_NOTES
2023-06-08 15:40:08 -04:00
dotasek 7b05c7514e
Bump poi version, remove unused old dependencies (#1296) 2023-06-08 10:47:37 -04:00
markiantorno 10f466487b Updating version to: 6.0.15-SNAPSHOT and incrementing test cases dependency. 2023-06-08 05:03:27 +00:00
markiantorno 3969ac75c4 Release: v6.0.14
## Validator Changes

* no changes

## Other code changes

* Fix bugs in language handling
* Implement Trivy vulnerability scanning and update POI and okhttp libraries
***NO_CI***
2023-06-08 04:33:30 +00:00
dotasek fed11c88ef
Bump okhttp3 version (#1295) 2023-06-07 17:25:27 -04:00
markiantorno 619703dbf8 Updating version to: 6.0.14-SNAPSHOT and incrementing test cases dependency. 2023-06-07 13:14:17 +00:00
markiantorno b704ea50fc Release: v6.0.13
## Validator Changes

* no changes

## Other code changes

* add clear() to JsonObject
***NO_CI***
2023-06-07 12:48:04 +00:00
markiantorno a605d944bc Updating version to: 6.0.13-SNAPSHOT and incrementing test cases dependency. 2023-06-06 21:27:18 +00:00
markiantorno 8edd61a197 Release: v6.0.12
## Validator Changes

* Improve message when there's multiple display options

## Other code changes

* Fix loading issue with r5 extensions
* NPM package compression improvements
* Update language file handling to handle context
* Remove logical models in minifier, and other improvements
* Auto update minimum slicing cardinality when slicer is assumed (extensions)
***NO_CI***
2023-06-06 20:55:08 +00:00
Mark Iantorno 8924aecf38 Updating test case dependency to v1.3.9
***NO_CI***
2023-06-06 19:15:16 +00:00
Grahame Grieve a4f54f519f
Merge pull request #1290 from hapifhir/gg-202206-cardinality-fixes
Gg 202206 cardinality fixes
2023-06-05 23:26:13 +02:00
Grahame Grieve 1c4ef1fa00 Improve message when there's multiple display options 2023-06-05 21:15:31 +02:00
markiantorno 72eee9cab7 Updating version to: 6.0.12-SNAPSHOT and incrementing test cases dependency. 2023-06-02 14:24:34 +00:00
markiantorno 44db954743 Release: v6.0.11
## Validator Changes

* no changes

## Other code changes

* Increment CQFramework dependency
***NO_CI***
2023-06-02 13:58:04 +00:00
dotasek 76e37a701d
Bump cqframework (#1285) 2023-06-01 14:23:23 -04:00
markiantorno f238d1af14 Updating version to: 6.0.11-SNAPSHOT and incrementing test cases dependency. 2023-05-29 22:43:58 +00:00
markiantorno edd06865c7 Release: v6.0.10
## Validator Changes

* no changes

## Other code changes

* Delete unused package import that breaks downstream JavaDoc
***NO_CI***
2023-05-29 22:14:49 +00:00
markiantorno 253357e5aa Updating version to: 6.0.10-SNAPSHOT and incrementing test cases dependency. 2023-05-29 13:44:41 +00:00
markiantorno 4014698c7d Release: v6.0.9
## Validator Changes

* Add support for "Obligation Profiles" (see https://chat.fhir.org/#narrow/stream/179177-conformance/topic/Proposed.20new.20Profile.20features)
* Adjust slice min/max checking to ignore type slices (rules are different in this case)
* Properly handle validating mime/type when terminology server is not available

## Other code changes

* Rework Pipelines - more stability and quicker
* Fix bug where elementmodel.Element.copy() didn't clone children. Users of the Element Model (not the normal model) should check all uses of copy. (Only known users are Validator + IG publisher)
* Add nimbus & ZXing to core library dependencies for forthcoming improved SHC/SHL support
***NO_CI***
2023-05-29 13:18:12 +00:00
Grahame Grieve ea84271d84 release new test cases 2023-05-29 08:58:52 +03:00
Grahame Grieve 783a8cf28b Support for Obligation Profiles 2023-05-29 01:12:46 +03:00
dotasek 55ac916133
Refactor Pull Request Pipeline (#1273)
* Try multiple module target directories

* Try different format

* Try displaying cache task name + multiple caches

* Name the maven artifact cache step + add all modules

* Start consuming cached builds + targets

* Fix job list

* Fix other bad params

* Fix bad indent

* Try test task

* Try different value syntax

* Add all modules

* See if cacheing works from linux to windows

* Refactor as testUnits

* Trim tested modules

* missing colon

* It's not an image anymore, it's a unit

* Test exec

* Test exec for real

* Fix parameters format

* Fix r5 url for package fetch (#1260)

* Fix r5 url for package fetch

* Revert previous commit

* Make r6 the only packages fetched from build.fhir.org

* Update RELEASE_NOTES.md

* Update RELEASE_NOTES.md

* Release: v6.0.6
## Validator Changes

* no changes

## Other code changes

* Update R6 package tgz fetching
***NO_CI***

* Updating version to: 6.0.7-SNAPSHOT and incrementing test cases dependency.

* Try using parameters

* Try another way

* Try third way

* Try fourth way

* Try fifth way

* Try 6

* Try 7

* Apply refactor

* Try iterating over images

* Try iterating over images 2

* Test all images

* Conditionally test multiplatform modules

* Test JDKs too

* Fix and()

* Add JDK image to job names + test JDKs for exec

* Better job name for setup

* Fix names

* more granular test configs

* fix repeated jobs

* name for exec jobs

* fix missing s

* Add placeholder Codecov job

* Fix complaint about job name

* Try moving codecov to test template

* Add explicit module for test

* Try setting up job name

* Try setting up job name

* Change job names to use underscore and alphanum

* Move codecov job back to master-branch

* Fix condition to match ubuntu_java_11

* Publish test reports

* Publish test reports

* use value for artifact name

* Use variable for skipJaCoCo conditions

* Skip validation temporarily

* Change artifact names.

* add jacoco:report-aggregate task

* remove leftover cut and paste line

* Improve test job display name

* Add jacoco results + codecov upload

* Fix accidental inclusions in module loop

* Remove JaCoCo coverage condition

* Bump down JaCoCo plugin

* Rearrange JaCoCo plugin

* Fix surefire and jacoco output

* Add jacoco to pipeline

* Try skipping maven cache step

* Add codecov token

* Add missing MAVEN_CACHE_FOLDER

* Change variable syntax

* Move setup to own template

* Change setup template

* rearrange pipeline yml, re-enable validation test module

* Update core version bumps

* Temporarily disable tests

* Move to PR pipeline + Fix unused pool declaration

* Disable some more.

* Restore disabled and ignored tests

* Fix task name + clean up old prototype

---------

Co-authored-by: markiantorno <markiantorno@gmail.com>
2023-05-24 13:09:13 -04:00
markiantorno 8f52ad8fe8 Updating version to: 6.0.9-SNAPSHOT and incrementing test cases dependency. 2023-05-24 14:51:20 +00:00
markiantorno 4f90606776 Release: v6.0.8
## Validator Changes

* Snapshot Generation Changes:
** Check for slicenames without any slicing
** Check that slice names are unique
** Check for additional slicing rules in a set of slices
** Check that the minimum cardinality of a set of slices is correct
* Clean up duplicate errors when dates/dateTimes/instants have invalid formats
* Handle unknown code systems consistently when validating coded elements
* Handle sub-slicing case where slice matches both the slice definition and the sub-slice definition

## Other code changes

* Add support for R4B to loader
* Change type if cache-id parameter
* Change snapshot generation to not update documentation from profile for elements with profiled types that are not extensions
* Add support for TestPlan and SubscriptionTopic in R4 IGs
***NO_CI***
2023-05-24 14:23:30 +00:00
Mark Iantorno 3ac79b4c4b Updating test case dependency to v1.3.7
***NO_CI***
2023-05-24 14:00:00 +00:00
Grahame Grieve 753ca69545 Merge remote-tracking branch 'origin/master' 2023-05-22 17:19:42 +10:00
Grahame Grieve 96d9581669 increase checking on snapshot generation when validating profiles 2023-05-22 17:18:13 +10:00
markiantorno ff8943061c Updating version to: 6.0.8-SNAPSHOT and incrementing test cases dependency. 2023-05-17 04:54:30 +00:00
markiantorno 9221395f06 Release: v6.0.7
## Validator Changes

* Update terminology for changes to tx validation policy: Wrong displays change from a warning to an error
* Add parameter ```-display-issues-are-warnings``` for restoring original behaviour that display issues are warnings
* Relax constraints on Reference targets for logical models
* Update dutch and german validation error messages + minor improvements to error messages
* Fix r5 url for package fetch (#1260)  …

## Other code changes

* Fix up all terminology cache tests
* Switch to System.err for now + report missing constants
* Add I18n tests for coverage and plural validity + fix missing messages
* Partial fix for R4/R5 conversion issues
***NO_CI***
2023-05-17 04:23:04 +00:00
Grahame Grieve bd41c69021 upgrade test cases 2023-05-17 13:47:20 +10:00
Grahame Grieve 6d2e3ee388 Fixes for display warnings 2023-05-13 21:47:25 -07:00
markiantorno 110f695e9c Updating version to: 6.0.7-SNAPSHOT and incrementing test cases dependency. 2023-05-12 23:49:33 +00:00
markiantorno 171a87c777 Release: v6.0.6
## Validator Changes

* no changes

## Other code changes

* Update R6 package tgz fetching
***NO_CI***
2023-05-12 23:22:47 +00:00
markiantorno 44c1b43516 Updating version to: 6.0.6-SNAPSHOT and incrementing test cases dependency. 2023-05-10 15:28:58 +00:00
markiantorno 91de165e2c Release: v6.0.5
## Validator Changes

* Fix NPE validating StructureMap
* Improve error message about uri values
* Fix for wrong display when server returns error
* Slight improvement in performance
* Fix FHIRPath split function (parameter is not regex)
* Stop warning that Markdown autolinks need to be escaped
* Allow NPM package versions to have the form {id}#{url} for direct access to packages

## Other code changes

* Support for NamingSystem conversion of url, version, and title (for THO)
* Update Conversion package docs (#1257)  …
* Return codeableConcept from validate-code
* Refactor: Resource Root Elements Conversion
* Minor fixes for R5 redirector
* Fix bug handling filter, and refactor terminology code
* Fix for dstu2016may Resource equals methods (#1251)  + Tests a
***NO_CI***
2023-05-10 14:58:38 +00:00
Grahame Grieve 32a017fa91 set up release 2023-05-09 23:18:59 -05:00
Grahame Grieve b402fd1c45 Fix bug handling filter, and refactor terminology code 2023-05-05 13:55:23 -05:00
markiantorno 551fe6d7c0 Updating version to: 6.0.5-SNAPSHOT and incrementing test cases dependency. 2023-05-04 13:17:39 +00:00
markiantorno 83a45f95f9 Release: v6.0.4
## Validator Changes

* Fix bug accessing canonical resources on servers

## Other code changes

* Various changes to support terminology service testing
***NO_CI***
2023-05-04 07:22:08 +00:00
Grahame Grieve ce354c4719 set up release 2023-05-04 16:48:14 +10:00
Grahame Grieve 410f08e6d6 terminology fixes - add expParams to cache key, fix up parameter types, report version 2023-05-02 16:58:54 +10:00
markiantorno 8ba62413ff Updating version to: 6.0.4-SNAPSHOT and incrementing test cases dependency. 2023-05-01 15:33:38 +00:00
markiantorno 9ed0b9ccee Release: v6.0.3
## Validator Changes

* Structure map validation improvements

## Other code changes

* Fix wrong name for systemVersion Parameter
* Language improvements for Lang Packs
* Fix up StructureMap R4/R5 conversion
***NO_CI***
2023-05-01 15:05:34 +00:00
Grahame Grieve e47a30aab3 set up release 2023-05-01 23:48:25 +10:00
Grahame Grieve e0286a5326 fix wrong name for systemVersion Parameter 2023-05-01 18:10:33 +10:00
markiantorno 03a1271508 Updating version to: 6.0.3-SNAPSHOT and incrementing test cases dependency. 2023-04-28 23:47:43 +00:00
markiantorno ccdaf9fe1d Release: v6.0.2
## Validator Changes

* Add support for JSON in tx client batch handling

## Other code changes

* no changes
***NO_CI***
2023-04-28 23:18:04 +00:00
markiantorno 718cd5e369 Updating version to: 6.0.2-SNAPSHOT and incrementing test cases dependency. 2023-04-28 14:29:47 +00:00
markiantorno d43d9bbdd8 Release: v6.0.1
## Validator Changes

* Improved Error messages when code is not in value set + various typo fixes
* Updated Dutch translations for error messages
* More informative failures when questionnaire value set validation fails
* Warnings when extension context is 'Element'
* Fix missing source id for tx server messages in validation output

## Other code changes

* Move HTTP logging to a sub-directory of temp
* Default to text log not HTML log for terminology logging, and don't spuriously escape the text log
* Use JSON not XML by default when using R4 terminology service
* Add support for R6 final version
* Bump HAPI to 6.4.1
***NO_CI***
2023-04-28 14:00:19 +00:00
Grahame Grieve 035b74a003 set up release 2023-04-28 19:56:57 +10:00
Grahame Grieve 28b21d566a Fix up error messages 2023-04-28 18:56:00 +10:00
Grahame Grieve 6da35aa838 set up release 2023-04-28 14:36:02 +10:00
Grahame Grieve 4ec909e302
Merge branch 'master' into gg-202304-r6-support 2023-04-28 10:50:28 +10:00
dotasek e01aa876c8
Bump HAPI to 6.4.1 (#1237)
* Bump HAPI to 6.4.1

* Fix broken checkstyle configs

* Fix checkstyle in convertors
2023-04-27 18:11:25 -04:00
Grahame Grieve 6e2b113f94 improved error message 2023-04-28 07:36:39 +10:00
markiantorno 46259c47e0 Updating version to: 6.0.1-SNAPSHOT and incrementing test cases dependency. 2023-04-26 23:45:01 +00:00
markiantorno 5a4049e0e2 Release: v6.0.0
## Validator Changes

Note: This validator release is accompanied by a new release of tx.fhir.org, and earlier versions
of the validator will not perform validation correctly for some valuesets and languages. This is
in effect a mandatory upgrade

* Major **Breaking** change: test multi-lanugage support on the terminology service API, and make many fixes.
** This release also includes full support for supplements providing designations and properties
* Add support for -install operation to install packages and generate snapshots while at it (support simplifier packages in sushi)
* Add support for ```lang-transform extract``` and ```-lang-transform inject``` to the validator (start of multi-lingual implementation support)
* Add support for -tx-tests to validator
* Change settings file to fhir-settings.json in .fhir, instead of fhir-tools-setting.ini (see [here](https://confluence.hl7.org/display/FHIR/Using+fhir-settings.json) for documentation)
* Add provisional support for running without a network: -no-network. Beware: this is not fully tested at this point
* Warning not error when the code system isn't known validating questionnaires
* Fix up loading of IG bundles
* Work around issue with R5 path in extensions pack
* Fix issue with SearchParameter validation throwing an exception if no expressions are valid

## Other code changes

* Code to support translation functionality
* Partial fix for problem parsing maps from previous versions
* Fix Code System rendering for supplements, and when there's 1..2 display translations
* Remove spurious header from ConceptMap rendering
* Return ID part correctly when FhirPath expression result is converted to string
* fix problem with leaf rendering in profile driven renderer
* Fix R4B tests to be based on R4B
* fix index error validating HierarchicalTable
* fix NPE in requirements renderer
* Fix NPE in code generator
* Rework package cache manager - add testing mode
* Add link to questionnaire rendering questionnaireResponse + Fix access violation rendering questionnaire
* Fix bugs generating narratives
* Defining the existence of R6
* i18n framework for HTML generation in renderers - step #1
* Re-org validation testing to be more memory efficient
* Better error handling loading resources
* Restore broken R4 loading
* Add new R5 fields to R4/R5 conversion for ValueSet
* minor changes two HumanName.getNameAsSingleString (missed family name)
***NO_CI***
2023-04-26 23:16:02 +00:00
Grahame Grieve 085ddde843 bump major version 2023-04-27 08:00:56 +10:00
Grahame Grieve dd9df96df5 fix loopback for eclipse? 2023-04-21 12:26:44 +08:00
dotasek 237a9c99f0
Bump jackson (#1222) 2023-04-18 09:49:53 -04:00
dotasek 946b241e65
Bump logback (#1218)
* Fix  SimpleWorkerContextTests, ignore ExternalTerminologyServiceTests

* Bump logback

* Try explicit logback-test.xml for validation

* Try forkNode implementation
2023-04-17 10:44:30 -04:00
dotasek 6a21d05ab8
Set JaCoCo evaluation via variable (#1213)
* Set JaCoCo evaluation via variable

* Fix variable syntax

* Try syntax again

* And again

* Evaluate against currentName

* More syntax fixes

* Evaluate condition via eq

* Fix logic

* Temp disable failing tests

* Revert "Temp disable failing tests"

This reverts commit 9ff4c88271.

* Bump jacoco + change version property in reports

* Re-use logic for codecov execution
2023-04-12 11:46:11 -04:00
dotasek c4f8b65ba4
JUnit Bump (#1204)
* Bump JUnit Version and manage dependencies via bom

* Bump JUnit Version and manage dependencies via bom

* Remove explicit version references in child projects

* Vintage engine isn't managed. Manage it explicitly
2023-04-04 22:39:03 -04:00
dotasek 1300acd867
Balance heap space between maven and surefire (#1195) 2023-03-29 14:30:27 -04:00
markiantorno aa8cb39580 Updating version to: 5.6.118-SNAPSHOT and incrementing test cases dependency. 2023-03-29 14:03:26 +00:00
markiantorno 3c04b80fdb Release: v5.6.117
## Validator Changes

* no changes

## Other code changes

* Fix R5 path for spec in generated narratives
* Hack to fix wrong R5 paths in generated narratives in extensions pack
* Suppress Prism rendering if ttl source is too big
* Fix up URLs in untouched elements when processing snapshots
* Fix up URLs in binding.description when generating snapshots
***NO_CI***
2023-03-29 13:36:02 +00:00
Grahame Grieve 69f31442bc more trying to save memory in tests 2023-03-29 23:02:42 +11:00
Grahame Grieve 55c67403d3 bump test cases 2023-03-29 15:59:07 +11:00
Grahame Grieve 6a78bcf25b bump test cases 2023-03-29 15:07:08 +11:00
markiantorno 7928c858bb Updating version to: 5.6.117-SNAPSHOT and incrementing test cases dependency. 2023-03-27 23:58:35 +00:00
markiantorno 9f671be87b Release: v5.6.116
## Validator Changes

* Make checking displays in concept map not case sensitive and just a warning

## Other code changes

* Fix loading version of extensions package in test cases
* Don't suppress error when FML doesn't parse in FMLParser
* Add PathBuilder (documentation + clean up code)
***NO_CI***
2023-03-27 23:33:00 +00:00
markiantorno 794a9c46b6 Updating version to: 5.6.116-SNAPSHOT and incrementing test cases dependency. 2023-03-25 12:24:55 +00:00
markiantorno e68a6171ee Release: v5.6.115
Final Code changes for R5 release

## Validator Changes

* Fix NPE validating maps

## Other code changes

* Refactor Loader for easier loading of earlier versions
* Fix various NPEs from version conversion testing
* First draft of Code generation for Extensions
* Improve summary message for map conversion outcome
* Move web path out of userData into resource field
* Fix FTP problem on windows (remote seperator)
* Update tests to use R5 package from test case repo everywhere
* Finish removing population type
* Rebuild .index.json if it's empty when installing a package
***NO_CI***
2023-03-25 11:55:37 +00:00
Grahame Grieve e6e8c66a3d upgrade test cases 2023-03-25 22:06:48 +11:00
Grahame Grieve adf6d5e3a0 updates for R5 final 2023-03-23 20:49:30 +11:00
markiantorno ce2480a745 Updating version to: 5.6.115-SNAPSHOT and incrementing test cases dependency. 2023-03-22 14:12:23 +00:00
markiantorno 7736f31847 Release: v5.6.114
## Validator Changes

* Fix up stated path in CodeSystemValidator
* Validate example URLs in value sets correctly
* Fix problem with composition library reference in R4

## Other code changes

* More work to sort out mappings
* Fix broken links in FMM & standards status levels
* Fix type of IG-parameter extension
* FTP: Stop re-initializing file type and mode with each upload (#1178)  …
* Fix snaphot generation warning when when profile-element is used
* fix path failure in tests
* Inline help16.png when generating narrative
* Suppress img.src=data content when rendering narrative
* Suppress value set expansion for core value sets that tx.fhir.org is getting wrong
* Fix NPE in profile comparison
***NO_CI***
2023-03-22 13:46:22 +00:00
Grahame Grieve 9648efb184 upgrade 2023-03-23 00:00:33 +11:00
Grahame Grieve 53051153a6 bump test cases 2023-03-21 17:44:35 +11:00
markiantorno 8878bc9cef Updating version to: 5.6.114-SNAPSHOT and incrementing test cases dependency. 2023-03-21 00:29:38 +00:00
markiantorno 950c781ffc Release: v5.6.113
## Validator Changes

* Fix problems validating variables
* No longer ignore hl7.org/fhir/tools when validating

## Other code changes

* Fixed bug with incorrect parameter type when POSTing a $validate-code request to a remote terminology server
* Fix OS issue with zipslip protection
* Fix for where profile_element extension was being ignored when checking types after snapshot generation
* Fix generated name for FML rules to be a valid name
* Allow loaders to decide which resources to load into the context
***NO_CI***
2023-03-21 00:00:30 +00:00
dotasek bde546d3b9 Bump test cases to release version
***NO_CI***
2023-03-20 19:28:37 -04:00
Grahame Grieve b5419efcab bump test case version 2023-03-21 06:10:50 +11:00
markiantorno 2a877b6faa Updating version to: 5.6.113-SNAPSHOT and incrementing test cases dependency. 2023-03-19 04:45:57 +00:00
markiantorno 59d8cf0bee Release: v5.6.112
## Validator Changes

* Don't validate codes in value sets if terminology vlidation is turned…  …
* Fix nPE validating bundles

## Other code changes

* Add file: to URL scheme list when checking for absolute URLs
* Adjust mappings handling code generating snapshots
* More improvements to r4/r5 transform testing
* Better error messages setting properties when transforming
* Better error messages converting types
* FHIRPath tests on element model
* Refactor FTPClient to perform fewer directory creates (#1159)  …
* Document how to build validator_cli locally (#1171)
***NO_CI***
2023-03-19 04:17:32 +00:00
Grahame Grieve c9f870840f upgrade 2023-03-19 14:28:22 +11:00
Grahame Grieve f8a19a1bae Refactor how mappings are handled when generating differentials: in R5, mapping names are unique 2023-03-18 05:47:33 +11:00
markiantorno 90bcab6554 Updating version to: 5.6.112-SNAPSHOT and incrementing test cases dependency. 2023-03-16 11:24:39 +00:00
markiantorno 7a9e5444c5 Release: v5.6.111
## Validator Changes

* Fixing issues parsing Bundle.issues in R5

## Other code changes

* Fix bugs handling XHTML
* Refactor package loading API - List(String) instead of String[]
***NO_CI***
2023-03-16 10:56:41 +00:00
markiantorno 2e36c8147a Updating version to: 5.6.111-SNAPSHOT and incrementing test cases dependency. 2023-03-14 12:43:23 +00:00
markiantorno e2967d923c Release: v5.6.110
## Validator Changes

* no changes

## Other code changes

* Fix NPE in string handling
***NO_CI***
2023-03-14 12:18:03 +00:00
Grahame Grieve 4de6bbf1ec set up release 2023-03-14 22:43:07 +11:00
Grahame Grieve 824f51f82e fixing broken links, and r4/r5 map testing 2023-03-14 13:24:00 +11:00
markiantorno b5bbe5108b Updating version to: 5.6.110-SNAPSHOT and incrementing test cases dependency. 2023-03-13 05:16:16 +00:00
markiantorno f48d413690 Release: v5.6.109
## Validator Changes

* Add format codes ```md``` and ```url``` to FHIRPath escape() and unescape()
* Add second parameter ```s_last``` to FHIRPath join() to use a different separator for the last time (e.g. ```.join(', ', 'and')```)

## Other code changes

* Parse status when parsing FML metadata
* Fix NPE in FHIRPath resolve() for contained resources ([discussion](https://chat.fhir.org/#narrow/stream/179167-hapi/topic/fix.20to.20FHIRPathEngine))
***NO_CI***
2023-03-13 04:45:19 +00:00
Grahame Grieve f7cda61cf9 set up release 2023-03-13 14:47:41 +11:00
Grahame Grieve 07a3962ac2
Merge pull request #1167 from hapifhir/gg-202303-misc3
Gg 202303 misc3
2023-03-13 06:36:00 +11:00
Grahame Grieve 7f68418cc6 update test case dependency 2023-03-12 21:58:09 +11:00
markiantorno 209fcc8c0b Updating version to: 5.6.109-SNAPSHOT and incrementing test cases dependency. 2023-03-11 12:16:50 +00:00
markiantorno 35fb1b20c1 Release: v5.6.108
## Validator Changes

* no changes

## Other code changes

* Tdy up extensions for R5 release
* Hack R5 observation for fix after QA
* Improve StructureMap rendering again
* Clarify Error messages converting between versions
***NO_CI***
2023-03-11 11:49:55 +00:00
Grahame Grieve 328fa52ab1 set up release 2023-03-11 21:25:44 +11:00
Grahame Grieve 6833ddd110 upgrade pom 2023-03-11 18:22:50 +11:00
markiantorno a3a9017bdb Updating version to: 5.6.108-SNAPSHOT and incrementing test cases dependency. 2023-03-10 13:09:53 +00:00
markiantorno 1e43fe43f0 Release: v5.6.107
## Validator Changes

* Add support for new ColorRGB code system (special case)

## Other code changes

* Add support for special case code systems internally
***NO_CI***
2023-03-10 12:44:48 +00:00
Grahame Grieve db3da3928c setup release 2023-03-10 22:35:44 +11:00
Grahame Grieve 1212b85b5e Change from Error to FHIRException when wrong value type is wrong on polymorphic element 2023-03-10 16:12:59 +11:00
markiantorno a3473354fd Updating version to: 5.6.107-SNAPSHOT and incrementing test cases dependency. 2023-03-09 21:19:20 +00:00
markiantorno d666d0aa80 Release: v5.6.106
## Validator Changes

* no changes

## Other code changes

* Additional checks in path construction for zip slip vulnerability
***NO_CI***
2023-03-09 20:50:18 +00:00
markiantorno f49eee623b Updating version to: 5.6.106-SNAPSHOT and incrementing test cases dependency. 2023-03-09 13:06:01 +00:00
markiantorno 0b8e2c3984 Release: v5.6.105
## Validator Changes

* More validation of StructureMaps

## Other code changes

* Add new R5 version to R4 version enumeration
* Fix for NPE generating profile comparison
* Add FML renderer for StructureMaps + various parsing fixes
***NO_CI***
2023-03-09 12:38:13 +00:00
Grahame Grieve f34958c172 set up release 2023-03-09 22:23:44 +11:00
Grahame Grieve 921219639b fix test case dependency 2023-03-09 11:05:02 +11:00
markiantorno 8bd83810ea Updating version to: 5.6.105-SNAPSHOT and incrementing test cases dependency. 2023-03-08 08:23:43 +00:00
markiantorno 2a2fc497c7 Release: v5.6.104
## Validator Changes

* Fix up issues validating whitespace
* Multiple fixes to StructureMap and ConceptMap validation

## Other code changes

* rename ig-r4.json to ig-r4.jsonx in IGs
* move R5 package to test cases
***NO_CI***
2023-03-08 07:53:54 +00:00
Mark Iantorno 6757a9e0ac Updating test case dependency to v1.2.16
***NO_CI***
2023-03-08 05:21:04 +00:00
markiantorno d4d160eb29 Updating version to: 5.6.104-SNAPSHOT and incrementing test cases dependency. 2023-03-07 16:31:22 +00:00
markiantorno b18181ab7e Release: v5.6.103
## Validator Changes

* Fix structure map validation issues around type
* Revise whitespace handling for unicode conformance in validator
* Improved error message for output directory requirements
* Improve compact version sorting in renderer
* Add timestamp to compact format

## Other code changes

* Fix JSON escaping utility function
* Bug fixes in XHTML processing.
* Convertors: Bug Fixes in spec evaluation
* Convertors: patchUrls now patches fhir-type extension values
* R5: Fix FML parsing missing locations
* R5: Fix location bugs in FML parsing
***NO_CI***
2023-03-07 16:03:02 +00:00
dotasek b714b199cf
Updated test cases version 2023-03-07 09:49:43 -05:00
Grahame Grieve ed016ef9ed update test case version 2023-03-07 21:51:42 +11:00
markiantorno 8a546d37eb Updating version to: 5.6.103-SNAPSHOT and incrementing test cases dependency. 2023-03-06 12:05:52 +00:00
markiantorno a7507e9887 Release: v5.6.102
## Validator Changes

* Add ConceptMap validation
* Add StructureMap validation
* Validate using type regex (had been omitted to now, mostly affects decimal validation)
* Add new -output-style values compact and compact-split
* Fix bug validating CDA choice elements without [x] in their names

## Other code changes

* Various fixes and utilities to support StructureMap & ConceptMap validation
* Fix Observation.value conversion between R5 and other versions
* Recognise R4B and R5 core packages
* Improvements to specification diffference engine for R5 publication
* More efficient XHTML AST model
***NO_CI***
2023-03-06 11:39:27 +00:00
Grahame Grieve 1a89284149 release new test cases 2023-03-06 21:56:34 +11:00
dotasek a45a44597d
Update test cases version 2023-03-02 23:32:42 -05:00
markiantorno ebd93f570f Updating version to: 5.6.102-SNAPSHOT and incrementing test cases dependency. 2023-03-03 04:08:44 +00:00
markiantorno f317bb15f6 Release: v5.6.101
## Validator Changes

* Fix NPE in Structure Map validation

## Other code changes

* Add back code missed when regenerating R5
* Update conversions for discovered issues for R5
***NO_CI***
2023-03-03 03:21:09 +00:00
dotasek 8c92b4b012
Update pom.xml
***NO_CI***
2023-03-02 21:19:35 -05:00
Grahame Grieve b18e541b5f
Gg 202303 r5 fixes (#1148)
* update test package dependency

* Add back code missed when regenerating R5

* fix NPE

* update conversions for discovered issues for R5

---------

Co-authored-by: Grahame Grieve <grahameg@gmail.ccom>
2023-03-02 18:35:33 -05:00
markiantorno da62438802 Updating version to: 5.6.101-SNAPSHOT and incrementing test cases dependency. 2023-03-02 03:50:02 +00:00
markiantorno 578b964cf9 Release: v5.6.100
## Major change:

* New R5 release - rebuild R5 implementation, update a lot of related code

## Validator Changes

* Load separate R5 extensions package
* Load FML directly, and validate mapping as much as possible

## Other code changes

* Fix bugs in Java R5 code generator
* Add more control at the code level over how to handle unknown profiles when generating snapshots
* Rework ConceptMap for major R5 changes
* Fix bug in CommaGeneratedStringBuilder (calling toString() multiple times duplicated content)
* handle case [reference].where(resolve() is X) when analysing types+elements in FHIRPath statements
***NO_CI***
2023-03-02 03:21:29 +00:00
dotasek 43556b21cb Update pom.xml again 2023-03-01 20:56:21 -05:00
Grahame Grieve e1b9423688
Update pom.xml 2023-03-02 12:28:13 +11:00
dotasek f7926f4897 Bump test cases version 2023-03-01 18:17:23 -05:00
dotasek 76c01a98aa
Add basic checkstyle plugin config (#1122)
Co-authored-by: dotasek <david.otasek@smilecdr.com>
2023-02-24 15:05:49 -05:00
markiantorno e9607783da Updating version to: 5.6.100-SNAPSHOT and incrementing test cases dependency. 2023-02-23 18:15:08 +00:00
markiantorno e2185d7d5c Release: v5.6.99
## Validator Changes

* Fix validation for query references with empty parameter values
* Fix validation for conditional references

## Other code changes

* Fix resource rendering for conditional references
* Fix bug caused by changing DiagnosticReport.conclusion to markdown
* Track target types on references in FHIRPath
* Minor type checking fixes for FHIRPath
* Fix bugs in FHIRPath type checking discovered during R5 preparation
* Add standardsStatus support to core model
* Update okhttp library
* Allow HTTPS for terminology server URL
* Update table generator to suppress external links in base row and column
***NO_CI***
2023-02-23 17:50:57 +00:00
dotasek 5d6636ba8c
Bump okhttp version (#1131)
Co-authored-by: dotasek <david.otasek@smilecdr.com>
2023-02-23 11:14:50 -05:00
dotasek 34b1bd05c5
Fix https for terminology server (#1118)
* Failing test

* Missing bracket

* Fix issue with https tx server

* Expand test coverage

* Bump maven-jar-plugin

Maybe fix build problem?

---------

Co-authored-by: dotasek <david.otasek@smilecdr.com>
2023-02-17 10:02:49 -05:00
markiantorno 9c768415f2 Updating version to: 5.6.99-SNAPSHOT and incrementing test cases dependency. 2023-02-15 10:37:45 +00:00
markiantorno 7ec74d0321 Release: v5.6.98
## Validator Changes

* Fix bug checking canonical URLs in bundles with dashes in them
* Fix extension messages (modifier and normal messages reversed)
* Change how error location paths are reported in bundles for easier resolution (no counting!)
* fix bugs checking whether binding is allowed in corner cases

## Other code changes

* Rendering Improvements: Additional Bindings, Search Parameters, Operation Definitions
* FHIRPath implementations for comparable(), highBoundary(), lowBoundary()
* Fix list of canonical resources from VersionUtilities
* Fix bug parsing html entities in XHTML parser
* Rename extension to http://hl7.org/fhir/StructureDefinition/structuredefinition-imposeProfile
***NO_CI***
2023-02-15 10:13:36 +00:00
Grahame Grieve bba2340bbc Setup release 2023-02-15 20:41:20 +11:00
Grahame Grieve 949110b465 test case snapshot 2023-02-12 18:34:54 +11:00
markiantorno 97604fdff5 Updating version to: 5.6.98-SNAPSHOT and incrementing test cases dependency. 2023-02-07 12:55:19 +00:00
markiantorno c91376f3b9 Release: v5.6.97
## Validator Changes

* no changes

## Other code changes

* Fix for Extensions moving in R5
***NO_CI***
2023-02-07 12:28:44 +00:00
markiantorno eec7c33e63 Updating version to: 5.6.97-SNAPSHOT and incrementing test cases dependency. 2023-02-05 21:04:53 +00:00
markiantorno 729e7afb33 Release: v5.6.96
## Validator Changes

* no changes

## Other code changes

* Fix bug with duplicate value in getResourceNames()
***NO_CI***
2023-02-05 20:42:24 +00:00
markiantorno b3cebe7bc6 Updating version to: 5.6.96-SNAPSHOT and incrementing test cases dependency. 2023-02-03 20:09:35 +00:00