Luc Maisonobe
6e5a114c7a
added Fast Hadamard Transform
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JIRA: MATH-215
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@729670 13f79535-47bb-0310-9956-ffa450edef68
2008-12-27 20:24:05 +00:00
Luc Maisonobe
c4126f3174
added nth root computation for complex numbers
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JIRA: MATH-236
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@729639 13f79535-47bb-0310-9956-ffa450edef68
2008-12-27 16:23:43 +00:00
Luc Maisonobe
9eccfc3c46
fixed javadoc comment
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git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@729431 13f79535-47bb-0310-9956-ffa450edef68
2008-12-25 18:06:19 +00:00
Luc Maisonobe
a1a7822552
removed unused method
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git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@729302 13f79535-47bb-0310-9956-ffa450edef68
2008-12-24 11:56:22 +00:00
Luc Maisonobe
1c90b51196
replaced use of deprecated method
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git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@729301 13f79535-47bb-0310-9956-ffa450edef68
2008-12-24 11:55:42 +00:00
Luc Maisonobe
17a35b2e8c
fixed various errors and warnings detected by checkstyle and findbugs
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git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@729291 13f79535-47bb-0310-9956-ffa450edef68
2008-12-24 10:47:53 +00:00
Luc Maisonobe
0e1654b627
added new cache-friendly specializations of get/set/operate/premultiply methods
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git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@729174 13f79535-47bb-0310-9956-ffa450edef68
2008-12-23 23:30:33 +00:00
Luc Maisonobe
ef8ee92f48
added a specialized implementation of premultiply
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removed unneeded signatures with RelVectorImpl already handled efficiently by base class
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@729173 13f79535-47bb-0310-9956-ffa450edef68
2008-12-23 23:27:52 +00:00
Luc Maisonobe
13583c53fa
use direct array access where possible
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git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@729172 13f79535-47bb-0310-9956-ffa450edef68
2008-12-23 23:25:31 +00:00
Luc Maisonobe
a20be3af18
fixed javadoc
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git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@729171 13f79535-47bb-0310-9956-ffa450edef68
2008-12-23 23:23:31 +00:00
Luc Maisonobe
febffccc41
added message for asymmetric matrices
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git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@728918 13f79535-47bb-0310-9956-ffa450edef68
2008-12-23 10:17:53 +00:00
Luc Maisonobe
6c48638cc5
removed evenPermutation and isSingular for consistency with other decomposition solvers
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git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@728917 13f79535-47bb-0310-9956-ffa450edef68
2008-12-23 10:17:11 +00:00
Luc Maisonobe
2cb4fc8a84
javadoc improvements
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git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@728916 13f79535-47bb-0310-9956-ffa450edef68
2008-12-23 10:14:49 +00:00
Luc Maisonobe
25a6b32fe1
prepared interface for general eigendecomposition
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we currently support only symmetric matrices and real eigenvalues
Jira issue MATH-235 asks for asymmetric matrices support, which needs
an API adaptation.
Preparing the interface yet avoids introducing incompatibility later.
The current status is explained in javadoc and matrix symmetry is checked
at runtime with an InvalidMatrixException triggered if asymmetry is detected.
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@728915 13f79535-47bb-0310-9956-ffa450edef68
2008-12-23 10:13:58 +00:00
Luc Maisonobe
6916b0314d
comments
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git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@728717 13f79535-47bb-0310-9956-ffa450edef68
2008-12-22 15:51:45 +00:00
Luc Maisonobe
0815079329
implemented solver as an internal class for efficiency
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git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@728716 13f79535-47bb-0310-9956-ffa450edef68
2008-12-22 15:50:57 +00:00
Luc Maisonobe
bdf20e5cf9
implemented solver as an internal class to avoid building decomposed matrices
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git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@728686 13f79535-47bb-0310-9956-ffa450edef68
2008-12-22 13:30:10 +00:00
Luc Maisonobe
b717e8d1c0
replaced references to RealMatrixImpl
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git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@728685 13f79535-47bb-0310-9956-ffa450edef68
2008-12-22 13:28:29 +00:00
Luc Maisonobe
46664c3e99
removed a leftover print statement
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git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@728643 13f79535-47bb-0310-9956-ffa450edef68
2008-12-22 10:57:34 +00:00
Luc Maisonobe
4bd8d8bc13
fixed loop unrolling error
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git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@728639 13f79535-47bb-0310-9956-ffa450edef68
2008-12-22 10:34:12 +00:00
Luc Maisonobe
008807938f
added getSolver() into LUDecomposition
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git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@728528 13f79535-47bb-0310-9956-ffa450edef68
2008-12-21 22:05:06 +00:00
Luc Maisonobe
1f3d5634d5
removed spurious exception clause
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git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@728526 13f79535-47bb-0310-9956-ffa450edef68
2008-12-21 21:54:26 +00:00
Luc Maisonobe
d1fc13cef3
fixed some javadoc
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git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@728523 13f79535-47bb-0310-9956-ffa450edef68
2008-12-21 21:53:33 +00:00
Luc Maisonobe
6387a1f0a3
reverted some changes introduced yesterday, as they lead to unexpected test failures
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git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@728507 13f79535-47bb-0310-9956-ffa450edef68
2008-12-21 21:23:18 +00:00
Luc Maisonobe
c060390793
reverted some changes introduced yesterday, as they lead to unexpected test failures
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git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@728500 13f79535-47bb-0310-9956-ffa450edef68
2008-12-21 21:04:47 +00:00
Luc Maisonobe
7716a7ac0d
decomposed fields can be set to final (this may help optimizer)
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git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@728483 13f79535-47bb-0310-9956-ffa450edef68
2008-12-21 19:48:17 +00:00
Luc Maisonobe
bf70bae29b
recover performances lost with changes for r723496
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git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@728481 13f79535-47bb-0310-9956-ffa450edef68
2008-12-21 19:35:59 +00:00
Luc Maisonobe
ed721c48a3
partially unrolled some computation loops to increase performance
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git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@728478 13f79535-47bb-0310-9956-ffa450edef68
2008-12-21 19:02:44 +00:00
Luc Maisonobe
136ffc1054
removed direct references to RealMatrixImpl and use factory
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git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@728186 13f79535-47bb-0310-9956-ffa450edef68
2008-12-20 00:03:13 +00:00
Luc Maisonobe
735e84a26a
added a new DenseRealMatrix class intended to replace RealMatrixImpl
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this class is more cache-friendly as it stores data from squares blocks
in flattened arrays. This allows algorithms that need cross-direction
navigation like multiplication or transpose) to be more efficient on
modern processors.
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@728185 13f79535-47bb-0310-9956-ffa450edef68
2008-12-19 23:59:38 +00:00
Luc Maisonobe
4826123478
added the addToentry and multiplyEntry methods
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to allow in-place operation for matrices
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@728184 13f79535-47bb-0310-9956-ffa450edef68
2008-12-19 23:53:11 +00:00
Luc Maisonobe
da40b8373a
removed overhead of Entry object allocation during OpenIntToDoubleHashMap iteration
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git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@726490 13f79535-47bb-0310-9956-ffa450edef68
2008-12-14 16:31:58 +00:00
Luc Maisonobe
11d8f0ec5f
Added support for sparse real matrices
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JIRA: MATH-230
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@726460 13f79535-47bb-0310-9956-ffa450edef68
2008-12-14 15:04:22 +00:00
Luc Maisonobe
578a219a0f
Added an int/double hash map (OpenIntToDoubleHashMap) with much smaller
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memory overhead than standard java.util.Map (open addressing and no boxing)
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@726459 13f79535-47bb-0310-9956-ffa450edef68
2008-12-14 14:56:50 +00:00
Luc Maisonobe
139a0e2c53
removed obsolete comment
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git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@724343 13f79535-47bb-0310-9956-ffa450edef68
2008-12-08 13:40:42 +00:00
Luc Maisonobe
3ac5b7b902
removed characters needing a specific encoding
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git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@724205 13f79535-47bb-0310-9956-ffa450edef68
2008-12-07 21:16:38 +00:00
Luc Maisonobe
1021f180e5
Added support for multi-dimensional Fourier transform.
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JIRA: MATH-152
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@724198 13f79535-47bb-0310-9956-ffa450edef68
2008-12-07 20:48:00 +00:00
Luc Maisonobe
71a29150bb
The root solvers now take the function to solve as a parameter to
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the solve methods, thus allowing to reuse the same solver for different
functions.
JIRA:MATH-218
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@724191 13f79535-47bb-0310-9956-ffa450edef68
2008-12-07 20:24:10 +00:00
Luc Maisonobe
50fea38398
updated error generation
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git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@724189 13f79535-47bb-0310-9956-ffa450edef68
2008-12-07 20:19:01 +00:00
Luc Maisonobe
2476371408
fixed missing error checks
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git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@724187 13f79535-47bb-0310-9956-ffa450edef68
2008-12-07 20:17:45 +00:00
Luc Maisonobe
b5f540eda2
added setter methods for rows and columns in matrices
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JIRA: MATH-234
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@724158 13f79535-47bb-0310-9956-ffa450edef68
2008-12-07 16:53:05 +00:00
Luc Maisonobe
227b7b2a00
added Frobenius matrix norm
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JIRA: MATH-232
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@724144 13f79535-47bb-0310-9956-ffa450edef68
2008-12-07 15:36:32 +00:00
Luc Maisonobe
2dc7b2d460
added an abstract implementation of RealMatrix and used it for RealMatrixImpl
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JIRA: MATH-231
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@724141 13f79535-47bb-0310-9956-ffa450edef68
2008-12-07 15:21:03 +00:00
Luc Maisonobe
eec0bdccd6
renamed getValues() into getInternalValues() in ResizeableDoubleArray
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(the old name is still there, but deprecated)
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@724136 13f79535-47bb-0310-9956-ffa450edef68
2008-12-07 14:39:30 +00:00
Luc Maisonobe
43b958fd8f
removed unneeded call to super()
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removed spurious data copy (a copy was already done in the ResizableDoubleArray)
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@724020 13f79535-47bb-0310-9956-ffa450edef68
2008-12-06 18:01:43 +00:00
Luc Maisonobe
9fc12bd85c
added support for Zipf distribution
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JIRA: MATH-178
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@724014 13f79535-47bb-0310-9956-ffa450edef68
2008-12-06 17:11:07 +00:00
Luc Maisonobe
607005c43d
removed reference to non-existent version 1.3 in changes report
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git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@723737 13f79535-47bb-0310-9956-ffa450edef68
2008-12-05 14:27:36 +00:00
Luc Maisonobe
483f55064e
improved matrix decomposition API.
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solving a linear system AX = B is now done by a call like:
RealVector x = new XyzSolver(new XyzDecomposition(a)).solve(b);
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@723736 13f79535-47bb-0310-9956-ffa450edef68
2008-12-05 14:05:50 +00:00
Luc Maisonobe
cc080433e4
make sure the abstract copy() method signature used is the restricted one
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inherited from the StorelessUnivariateStatistic interface and not the
general one inherited from AbstractUnivariateStatistic.
The eclipse compiler generates an error without this.
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@723694 13f79535-47bb-0310-9956-ffa450edef68
2008-12-05 09:49:25 +00:00
Luc Maisonobe
7ce0b0ed8a
moved the various solve function out of decomposition algorithms
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and into a dedicated DecompositionSolver class
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@723500 13f79535-47bb-0310-9956-ffa450edef68
2008-12-04 23:56:17 +00:00