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2242 Commits

Author SHA1 Message Date
James Agnew 10deea4967
Merge pull request #1610 from jasmdk/MissingMandatoryStatusOnSnomed 
Missing mandatory status on created Snomed CodeSystem
 2019-12-11 19:27:47 -05:00
jamesagnew cafb6424f1 Test fix 2019-12-05 21:33:06 -05:00
James Agnew 67b53e5326 Prevent ConcurrentModificationException during cascading delete 2019-12-05 18:00:40 -05:00
James Agnew f58fba6f04
Some test cleanup (#1616) 
* Some test cleanup

* Add test

* More test logging

* More docs cleanup

* Add test logging
 2019-12-02 11:00:18 -05:00
James Agnew 86bd9a28fe
Fix to valueset expansion logic (#1613) 
* Fox to valueset expansion logic

* Work on docs

* Docs tweaks

* Docs tweaks

* Fix test

* Remove unused class

* Add changelog
 2019-12-01 21:21:19 -05:00
ahn 29b08e7308 Missing mandatory status on created Snomed CodeSystem 2019-11-27 12:21:02 +01:00
James Agnew f4fc19502b Fix intermittent failure 2019-11-26 22:24:50 -03:00
James Agnew ca620d652f
Add tests (#1606) 
* Support chained HAS

* Add some tests

* Add some cleanup

* Work on intermittent tests
 2019-11-24 10:11:49 +01:00
James Agnew 27749f4e23
Support chained HAS (#1605) 2019-11-24 06:29:56 +01:00
James Agnew 51b608188b
Some CI surefire improvements (#1602) 
* Some CI surefire improvements

* Build tweak

* More tweak

* Update azure-pipelines.yml for Azure Pipelines

* Update azure-pipelines.yml for Azure Pipelines

* One more CI attempt

* Update azure-pipelines.yml for Azure Pipelines

* Tweak command line

* Another build test fixc

* More build cleanup
 2019-11-23 19:51:02 +01:00
James Agnew a2f77b23d2
Fix #1583 - Index local refs in canonical types (#1593) 
* Fix #1583 - Index local refs in canonical types

* Add fix to pre-expansion

* Test fix

* Rework ID handling

* Test fixes

* Fix test
 2019-11-23 16:32:37 +01:00
Ken Stevens b36670377f fix circular reference merge to master 2019-11-22 11:02:05 -05:00
James Agnew 3173af31ae Try to avoid intermittent test failure 2019-11-17 15:28:50 -05:00
James Agnew 74159dcb26
Work on refactoring how PIDs work (#1580) 
* Start work on refactoring how PIDs work

* Some test fixes

* Test fixes

* Test fixes

* Restore accidentally deleted line

* One more tweak

* Rework resource link extraction

* Test fix

* Split out transaction processor

* Updates

* Test fix

* Test fixes

* Test fixes

* Clean up LGTM warning

* Fix compile failure

* One more test fix

* Fix LGTM issue

* Add spot for metadata

* Add test logging

* Remove testing code

* More test logging

* Add some test logging

* Attempty to fix intermittent test failure

* Improve exception tracking

* Work on simplifying search param registry

* Fix compile

* Fix compile errors

* Fix two test bugs
 2019-11-17 14:35:19 -05:00
James Agnew fba134853c Remove unused code 2019-11-15 16:44:17 -05:00
Ken Stevens 995bda0623 update comment 2019-11-14 14:55:02 -05:00
Ken Stevens ad39b319f8 fix test 2019-11-14 14:55:02 -05:00
Ken Stevens 1fff132f8e fix test 2019-11-14 14:55:02 -05:00
Ken Stevens ad8930fdba handle paging case 2019-11-14 14:55:02 -05:00
Ken Stevens f11d939131 oops 2019-11-14 14:55:02 -05:00
Ken Stevens 25c094e38a skip trying to populate resources in search result bundle if no resources were found 2019-11-14 14:55:02 -05:00
James Agnew 497a96ae68 Version bump for next round of development 2019-11-12 22:09:21 -05:00
jamesagnew f99ad981b5 Version bump to 4.1.0 2019-11-12 16:08:20 -05:00
James Agnew aa0301084b
Don't succeed validation on unknown codesystem (#1575) 
* Don't succeed validation on unknown codesystem

* Test fixes

* Work on error messages

* Work on code validation API

* work on tests

* Work on validation

* Test fix

* Update DSTU3 validation reources

* Upgrade structures

* Test fixes
 2019-11-12 14:35:49 -05:00
James Agnew 1a348abaf5 Try to fix 2 intermittent test failures 2019-11-08 08:45:08 -05:00
jamesagnew 3b1d8d1bc0 Add test logging sort 2019-11-08 07:27:25 -05:00
jamesagnew 7c8342dcc1 Add some test logging 2019-11-08 05:53:59 -05:00
James Agnew c027ff27c3 Merge branch 'master' of github.com:jamesagnew/hapi-fhir 2019-11-07 21:52:31 -05:00
James Agnew d4aea82460 Add some test logging 2019-11-07 21:50:06 -05:00
James Agnew 056756dbab
Fix paging issue #1300 (#1584) 
* Fix paging issue

* Add changelog with credit

* Add a test
 2019-11-07 18:17:09 -05:00
James Agnew ebc52e6b48 Correctly handle below expansion with missing system 2019-11-07 09:28:24 -05:00
Anthony Sute 92de268f32 Fixes for LGTM warnings 2019-11-06 08:47:53 -05:00
Anthony Sute 3cf8254625 (1) Fixes to address _filter-based _id retrievals not being restricted to the specified resource type 
(2) Import fix for FhirServerConfig.java in hapi-fhir-jpaserver-example
 2019-11-06 08:47:53 -05:00
jamesagnew 9c93d5d7f7 Test fixes 2019-11-04 07:04:26 -05:00
James Agnew 78a323f105 Test fixes 2019-11-03 21:20:22 -05:00
James Agnew f481e11ad5 Update migration tasks 2019-11-03 18:49:47 -05:00
James Agnew 60628356a8 Version bump spring 2019-11-03 11:29:22 -05:00
jamesagnew 2bf578879a One more bit of extensibility 2019-11-02 19:03:46 -04:00
jamesagnew f7ad82d7a8 Add a test 2019-11-02 18:47:02 -04:00
jamesagnew 5ad57d9ea9 Add some API to subscriptionactivating interceptor to make it more 
extendible
 2019-11-02 18:14:50 -04:00
jamesagnew 89b25ce828 License updates 2019-11-02 17:34:05 -04:00
James Agnew 3b6709e1d1
Merge pull request #1566 from jamesagnew/ja_20190928_rationalize_search_param_extractor 
Rationalize search param extractors across FHIR versions
 2019-11-02 16:18:23 -04:00
James Agnew 33a3ea8fca Fix compile error 2019-10-30 16:23:24 -04:00
James Agnew cacd243a44
Correctly Expand ValueSets in non-lucene mode (#1573) 2019-10-30 16:21:44 -04:00
Ken Stevens 1fd3948b12
Merge pull request #1572 from jamesagnew/ks-source-subscriptions 
fixed in-memory search by _source for Dstu3
 2019-10-30 16:20:14 -04:00
James Agnew e96500d54f Add a test 2019-10-30 15:51:46 -04:00
James Agnew 7f62d60c4e Correctly Expand ValueSets in non-lucene mode 2019-10-30 14:26:31 -04:00
Ken Stevens 21c591eaf2 ready for review 2019-10-30 13:49:10 -04:00
James Agnew d3e66680f0 Add some testing 2019-10-30 09:49:40 -04:00
James Agnew b90f285218 Merge branch 'master' into ja_20190928_rationalize_search_param_extractor 2019-10-30 08:41:14 -04:00