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153 Commits

Author SHA1 Message Date
James Agnew 1fcb374d40 Test fixes 2018-05-30 15:03:11 -04:00
jamesagnew d127a89047 Some test fixes 2018-05-30 11:01:43 -04:00
James Agnew d819d685ee Test fix 2018-05-30 09:57:41 -04:00
jamesagnew 5a96482860 More work o JDK9 tests 2018-05-30 08:04:01 -04:00
James Agnew a52805e504 Work on JDK9 support 2018-05-30 05:45:08 -04:00
Diederik Muylwyk 0e2c57fa60 Bumping version. 2018-05-28 17:44:38 -04:00
Diederik Muylwyk 2871920734 Preparing release. 2018-05-28 10:45:47 -04:00
jamesagnew 09eb52ed27 Fix failing tests 2018-05-24 06:33:13 -04:00
James Agnew 1ead3f715e
Merge pull request #892 from hdconradi/validate-questionnaire-response-item-type-for-text 
Allow text items in questionnaire
 2018-05-24 06:03:18 -04:00
James Agnew 934369a1d9
Merge branch 'master' into instance-validator-npe-on-itemtype 2018-05-24 05:55:22 -04:00
James Agnew 179e88eb86
Merge pull request #881 from hdconradi/two-typos 
Two typos in the InstanceValidator
 2018-05-24 05:52:39 -04:00
James Agnew 74e7152ce6
Merge pull request #880 from hdconradi/required-answer-can-be-missing-when-in-progress 
Activate the QuestionnaireResponseValidatorDstu3Test again and add tests for missing required items
 2018-05-24 05:46:41 -04:00
James Agnew eb77b8a225
Merge pull request #874 from hdconradi/validation-server-exception-when-local-reference-absent 
Validation server exception when local reference absent
 2018-05-23 06:29:25 -04:00
jamesagnew c82c57eb37 Sync validator 2018-05-23 06:28:58 -04:00
jamesagnew 7e83fc78cf Disable user resource and weaken validation on the public server 2018-05-21 19:04:37 -04:00
jamesagnew e8139192e0 FIx test issues 2018-05-21 13:07:11 -04:00
James Agnew a7cd37e2a0
Merge branch 'master' into fix936 2018-05-17 07:30:31 -04:00
patrick-werner 4d8608e721 temp. fixed: "Attempt to read a single element when there is more than one present" #949 
Will be overwritten by next RI import!
 2018-05-17 10:15:29 +02:00
patrick-werner 07d0cc7876 Merge branch 'master' into bpCheckValFix 2018-05-17 09:53:41 +02:00
patrick-werner 78f9d6333a temp. fixed: "Attempt to read a single element when there is more than one present" #949 
Will be overwritten by next RI import!
 2018-05-17 09:43:35 +02:00
James Agnew 4fd868afae Credit for #946 and add extensions to the CLI uploader 2018-05-16 19:32:12 -04:00
patrick-werner b4d2fcfc68 added core-extension validation support 2018-05-16 18:51:55 -04:00
James Agnew 0b6a146945 Don't do karaf verifier by default 2018-05-16 14:24:55 -04:00
patrick-werner 412994bfc7 Merge branch 'core-extensions' 2018-05-15 12:16:35 +02:00
James Agnew a3ff08d9ec
Replace phloc with ph for #775 (#930) 
* Replace phloc with ph

* Enable schematron tests

* Make HAPI-FHIR ph-schematron on OSGI

* Work on getting tests passing

* Another test fix

* Fix up transaction handling for DSTU2

* Add changelog

* Avoid double transaction

* Dont use readonly

* One more test fix

* Update to snapshow build

* Resolve a circular dependency

* Try to fix tests

* Solve recurring NPE in DSTU2 tests

* Fix one more test

* Test fix

* More test threading fixes

* One more attempt to get tests passing

* Refactoring for tests

* Refactoring for tests
 2018-05-14 17:38:40 -04:00
James Agnew 3a03d4ff63 Add test for #942 2018-05-13 10:31:54 -04:00
patrick-werner 305cc9c9c4 added core-extension validation support 2018-05-13 16:22:57 +02:00
James Agnew 8c47d966e9 Add test for #938 2018-05-13 09:03:12 -04:00
jamesagnew 3d762b984b Sync to R4 definitions 2018-05-12 19:35:42 -04:00
patrick-werner 405bb50036 Modified Information warning about non must-support content 2018-05-12 14:12:01 +02:00
James Agnew b17eebd8d2 Squashed commit of the following: 
commit 2be11651c2
Author: James Agnew <jamesagnew@gmail.com>
Date:   Thu May 10 11:50:53 2018 -0400

    Update changelog

commit b3bb5f9052
Author: James Agnew <jamesagnew@gmail.com>
Date:   Thu May 10 11:19:28 2018 -0400

    Parameter updates

commit f6b1082ba4
Author: James Agnew <jamesagnew@gmail.com>
Date:   Thu May 10 07:24:30 2018 -0400

    More test fixes

commit 81a69c265f
Author: James Agnew <jamesagnew@gmail.com>
Date:   Thu May 10 06:26:48 2018 -0400

    Fix compile error

commit 935938e92c
Author: James Agnew <jamesagnew@gmail.com>
Date:   Thu May 10 06:25:18 2018 -0400

    Another test fix

commit 43568a1f8d
Author: James Agnew <jamesagnew@gmail.com>
Date:   Thu May 10 06:18:06 2018 -0400

    Fix compile error

commit e95894e643
Author: James Agnew <jamesagnew@gmail.com>
Date:   Thu May 10 06:13:50 2018 -0400

    More work on tests

commit 9393fb8f4f
Author: James Agnew <jamesagnew@gmail.com>
Date:   Thu May 10 05:36:27 2018 -0400

    One more fix

commit 437f5051e4
Author: James Agnew <jamesagnew@gmail.com>
Date:   Wed May 9 21:32:10 2018 -0400

    Work on validator

commit 20c51add4f
Author: James Agnew <jamesagnew@gmail.com>
Date:   Wed May 9 19:34:10 2018 -0400

    Validator fix

commit 7bf2b0a0e9
Author: James Agnew <jamesagnew@gmail.com>
Date:   Wed May 9 18:44:04 2018 -0400

    Fix test

commit adc73e75c9
Author: James Agnew <jamesagnew@gmail.com>
Date:   Wed May 9 17:22:34 2018 -0400

    Merge validator
 2018-05-10 11:53:32 -04:00
James Agnew f092caf386
Merge pull request #903 from dgileadi/902-fix-bounds-exception 
Fix #902, IndexOutOfBoundsException for DSTU2 QuestionnaireResponses with groups
 2018-05-04 08:49:17 -04:00
jamesagnew 83a5eedb29 Fix performance regression in DSTU3 validation 2018-04-28 11:42:59 -04:00
Heinz-Dieter Conradi 01b84cdd96 Fix the InstanceValidator so that the test passes for text items too. 2018-04-03 23:40:36 +02:00
Heinz-Dieter Conradi 04ae5a30d1 R4: add a questionnaire test which checks all possible item types 2018-04-03 23:39:58 +02:00
Heinz-Dieter Conradi fafbabb34a DSTU3: add a questionnaire test which checks all possible item types 2018-04-03 23:37:37 +02:00
Heinz-Dieter Conradi baf53efd32 Fixing the NPE in the InstanceValidator 2018-04-03 23:35:00 +02:00
Heinz-Dieter Conradi 1aff132691 Test questionnaire with embedded items for R4. 
The test for an item embedded in a text item works as expected.
    However, the embedded item in a choice or openchoice case
    triggers an NPE.
 2018-04-03 23:34:53 +02:00
Heinz-Dieter Conradi eeb4fe62b7 Test questionnaire with embedded items for DSTU3. 
The test for an item embedded in a text item works as expected.
However, the embedded item in a choice or openchoice case
triggers an NPE.
 2018-04-03 23:33:12 +02:00
Heinz-Dieter Conradi 913283559f Wrong javadoc parameter name 
This is an error in some ide's and of course in javadoc.
 2018-04-03 23:28:23 +02:00
Heinz-Dieter Conradi 41207e5555 Testing missing required items in QuestionnaireResponses 2018-04-03 23:20:31 +02:00
Heinz-Dieter Conradi 2d55b1f886 Remove the Ignore from the QuestionnaireResponseValidatorDstu3Test 2018-04-03 23:20:31 +02:00
Heinz-Dieter Conradi b2107baae4 Fix the server exception when validating an invalid local reference 
'fetcher == null' is ok for a local reference.

Unfortunately, there are now two messages with the same meaning:
- one from the ProfileValidation
- one from the code in this location
 2018-04-03 23:11:53 +02:00
Heinz-Dieter Conradi f2cd05fe3b Add test for invalid local reference (R4) 
Currently an invalid local reference causes an InternalErrorException
caused by: FHIRException: Resource resolution services not provided.
The validation should instead return normally and contain an error
message.
 2018-04-03 23:11:40 +02:00
Heinz-Dieter Conradi 229e0977d2 Add test for invalid local reference (DSTU3) 
Currently an invalid local reference causes an InternalErrorException
caused by: FHIRException: Resource resolution services not provided.
The validation should instead return normally and contain an error
message.
 2018-04-03 23:09:39 +02:00
jamesagnew c5b286921e Tests all passing 2018-03-30 15:18:57 -04:00
jamesagnew 180336e076 Sync to master 2018-03-29 06:54:24 -04:00
jamesagnew 53c2d8a38d Merge branch 'master' into loinc_loader_update 2018-03-29 06:21:55 -04:00
jamesagnew 418e82032f Prep for 3.3.0 2018-03-29 05:48:13 -04:00
James Agnew d9c167455e Make sure we correctly clean up resources 2018-03-27 15:20:22 -04:00
James Agnew b56d65ef5b
Merge pull request #871 from johnpoth/hapi-fhir-osgi 
Implement #826 - add OSGI support and Apache Karaf features with inte…
 2018-03-27 06:06:34 -04:00
David Gileadi 3b724107ff Fix the IndexOutOfBoundsException, #902 
Add a test that demonstrates it
 2018-03-26 11:10:55 -07:00
James Agnew 29c09e40f0
Merge pull request #858 from patrick-werner/master 
added Test for #11 to Dstu3 and R4, fixed #853
 2018-03-24 06:31:24 -04:00
James Agnew 308ac63a77 Merge branch 'master' into loinc_loader_update 2018-03-20 07:53:41 -04:00
James Agnew 6359f7f8a1 More work on loinc 2018-03-19 08:51:02 -04:00
patrick-werner ff04ab3358 ${argLine} -> [at]{argLine} 
see:
http://maven.apache.org/surefire/maven-surefire-plugin/faq.html#late-property-evaluation
 2018-03-19 10:45:33 +01:00
patrick-werner 0cee57392a Merge remote-tracking branch 'upstream/master' 
# Conflicts:
#	hapi-fhir-validation/src/test/java/org/hl7/fhir/r4/validation/FhirInstanceValidatorR4Test.java
 2018-03-07 11:45:31 -03:00
James Agnew 1a331838d0 Add comment for #870 2018-03-05 08:36:42 -05:00
James Agnew 1fcfc13dca Merge branch 'schematron-questionnaire-que-7' of https://github.com/hdconradi/hapi-fhir into hdconradi-schematron-questionnaire-que-7 2018-03-05 08:29:57 -05:00
jamesagnew 07290ae8a0 Sync to latest R4 code 2018-03-04 11:02:47 -05:00
jamesagnew b2ceb87a70 Work on #873 2018-03-03 17:50:29 -05:00
James Agnew 790aaeb4ea Tests for #872 2018-02-28 21:34:32 -05:00
Heinz-Dieter Conradi f4fa233ad7 remove superfluous import 2018-02-28 13:34:14 +01:00
jpoth 66ebfa0ed3 Implement #826 - add OSGI support and Apache Karaf features with integration tests 2018-02-28 11:32:53 +01:00
Heinz-Dieter Conradi 8e000749ba Fix questionnaire schematron with enableWhen and hasAnswer 
Without this fix, the 'hasAnswer' element of a questionnaire item is ignored.
This in turn allowes it that one can have both an 'answer' and a 'hasAnswer' item.

A fix is applied for both DSTU3 and R4 and tests are provided.

The tests for R4 are currently ignored, since they require a valid schematron,
e.g. by merging #869
 2018-02-27 16:31:19 +01:00
patrick-werner 0af95842a9 fixes #853 
performer validation implementation is now list based
added Test
 2018-02-22 12:23:42 +01:00
jamesagnew c8e61cd9a3 Fix test for #851 2018-02-15 07:15:25 -05:00
jamesagnew 8458544fc9 Add test for #851 2018-02-15 07:12:56 -05:00
James Agnew b61887e841 Improve performance of base64 validation 2018-01-30 17:37:12 -06:00
James Agnew 41583606a6 Reduce burden of base64 validation 2018-01-30 14:08:34 -06:00
James Agnew 2810fff39f Sync validator with RI 2018-01-30 13:58:35 -06:00
James Agnew e4c58af006 Fix broken test in validator 2018-01-30 13:55:20 -06:00
James Agnew ebcdd0d917 Add test for #824 2018-01-30 12:41:34 -06:00
James Agnew 8d468de551 Use R4 validator for DSTU3 validation 2018-01-30 11:16:04 -06:00
James Agnew 16038ece26 Version bump to 3.3.0-SNAPSHOT 2018-01-23 10:31:01 -05:00
James Agnew 4fd3e20d06 Remove duplicate resource body creation (Merge branch 'optimize_jpa') 2018-01-21 18:16:11 +08:00
James Agnew 6468ca474a Verion bump to 3.2.0 2018-01-13 02:14:33 -05:00
James Agnew 01186ec8cb Squashed commit of the following: 
commit ab876ef864005b6758d3e00a1bb1ef2dad5d2161
Author: James Agnew <jamesagnew@gmail.com>
Date:   Fri Jan 12 18:59:15 2018 -0500

    Tests all passing

commit 4f8a5d98307da1bb5ca7602e34b1d3b791f73d25
Author: jamesagnew <jamesagnew@gmail.com>
Date:   Fri Jan 12 08:21:58 2018 -0500

    Almost compiling
 2018-01-12 18:59:43 -05:00
jamesagnew 6fc88caa51 More work on optimizing JPA 2018-01-08 07:15:58 -05:00
James Agnew 8c10d96416 Add tests 2017-12-22 13:33:35 -05:00
James Agnew 3e296f9d1b Merge branch 'master' of github.com:jamesagnew/hapi-fhir 2017-11-25 17:53:01 -05:00
James Agnew 6afe6804db Fix #796 - Correctly escape spaces in generated URLs 2017-11-25 17:52:12 -05:00
jamesagnew 5b909b4746 Version bump to 3.2.0-SNAPSHOT 2017-11-24 13:32:47 -05:00
jamesagnew 42dd34252d Version bump to 3.1.0 2017-11-23 13:27:21 -05:00
James Agnew 1d06c9165b Remove more windows line ending dependencies 2017-10-31 17:55:16 -04:00
James 15ba0dff03 Clean up email subscription type 2017-10-26 06:02:12 -04:00
James Agnew 16e19a9fed Fix #720 - Failure to parse custom type 2017-10-21 13:47:03 -04:00
James Agnew a265de8649 Validation fixes for QuestionnaireResponse validation 2017-10-18 11:59:22 -04:00
James Agnew 9ca85b4cf3 Re-enable errorprone on standard hapi fhir build. woohoo! 2017-10-15 11:27:30 -04:00
James Agnew 4b8a8e8af1 Fix #758 - Invalid char 2017-10-12 21:48:31 -04:00
James Agnew 9d6bfdc25a Remove useless log line 2017-10-11 21:16:56 -04:00
James Agnew 0ac53e55d4 Accidentally reverted a fix in InstanceValidator 2017-10-11 13:38:05 -04:00
James Agnew 78b7188fbc Fix validation error when Bundle has no type 2017-10-11 10:20:12 -04:00
James Agnew 328080e87b Add test for #739 2017-09-27 21:36:40 -04:00
James Agnew 87383ad802 Version bump to 3.1.0-SNAPSHOT 2017-09-27 21:23:34 -04:00
James e19c13fa6f Prepare 3.0.0 release 2017-09-24 17:55:16 -04:00
James 49bdaa1a45 Version bump to 3.0.0 2017-09-23 17:31:39 -04:00
James Agnew 85aef0a853 Refactor tests 2017-09-10 07:23:57 -07:00
James Agnew 805fbad6ce All recreating code systems with previously used URL 2017-09-09 21:49:26 -07:00
James Agnew 2bb01451ea Cleanup of validator 2017-09-09 20:55:00 -07:00