Tadgh
7ed65b0080
partially done writer, working out size-based chunking
2020-06-04 20:58:06 -07:00
Tadgh
7d46b3cc10
Partitioning Based on resource type complete. Still no threading
2020-06-03 14:58:42 -07:00
Tadgh
e8970bce46
Running batch job
2020-06-02 16:08:19 -07:00
Tadgh
31b7e862d4
Remove extra beans
2020-06-02 15:00:56 -07:00
Tadgh
bb863f26fa
Initial run through the first part of batch integration
2020-06-02 13:44:23 -07:00
Tadgh
f8d699e13b
Initial working commit passing jobs to spring batch
2020-06-01 15:51:09 -07:00
Tadgh
0fc2e04e65
wip
2020-06-01 12:13:55 -07:00
Tadgh
aa7d1cbcb7
Wip getting tasks built
2020-06-01 11:32:36 -07:00
Tadgh
a306825625
moving dependencies around. Get non-persisted batch working
2020-05-28 12:10:52 -07:00
Tadgh
81d5ff8f5a
Add schema initialization
2020-05-27 17:06:52 -07:00
Tadgh
48fcf8a39d
wip
2020-05-26 12:08:00 -07:00
Tadgh
35b1533db1
Add new project for spring batch
2020-05-25 22:32:00 -07:00
James Agnew
6899604ae4
Correct validation of fragment codesystems ( #1865 )
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* Update validation for fragment codesystem
* Test fixes
* Add changelog
* Test fix
2020-05-25 20:44:09 -04:00
jamesagnew
0175396ee0
Docs fix
2020-05-25 20:28:57 -04:00
jamesagnew
2bcfe7cdaa
Merge branch 'master' of github.com:jamesagnew/hapi-fhir
2020-05-25 13:20:59 -04:00
jamesagnew
bf550f9c27
License header updates
2020-05-25 13:20:32 -04:00
James Agnew
535bf88efe
Fixes to diff operation ( #1866 )
2020-05-25 13:16:58 -04:00
jamesagnew
3807640347
Resolve merge conflict
2020-05-24 11:38:52 -04:00
jamesagnew
6a4f5b9b3a
Credit for #1826
2020-05-24 09:32:44 -04:00
Martin Zacho Grønhøj
9bde517540
Install external ig package at startup ( #1826 )
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* Do not use deprecated methods in structures-r4 test
* beginning development of feature Implementation Guide installer
* fetch IG, generate snapshots of SDs of and persist conformance resources to db
Missing initialization, error-handling and handling of NameSystems and Subscriptions
* Refactor IgInstaller and implement support for R4 and R5
* Error handling and removed logic for invoking IG installation
IgInstaller should be invoked by applications
* Implement pull request comments in IgInstaller
1) Renamed IgInstaller -> IgInstallerSvc for consistency
2) Use field autowiring and @PostConstruct for consistency
3) Use exceptions instead of boolean flags for success indication
4) Use IValidationSuport to generate snapshots of StructureDefinitions
in a version independent way (less maintenance) instead of SnapshotGenerator.java
5) Read IGs for tests from src/main/resources instead of external URL
* IG installation: Wrap exceptions during resource creation in custom class
* IG installation: Improved logging
* IG installation: Search for existing resources in a version independent way
2020-05-24 09:25:46 -04:00
jamesagnew
c97ef7adfc
A bit more contributors cleanup
2020-05-23 19:45:00 -04:00
jamesagnew
3bf0628436
Updatyes to devs list
2020-05-23 19:17:33 -04:00
jamesagnew
d24f075cdb
Update some orgs
2020-05-23 17:22:59 -04:00
jamesagnew
b60404dbb8
Credit for #1849
2020-05-23 17:18:37 -04:00
Craig Appl
098c3ad737
Fixing a typo in the performance.md server_jpa doc ( #1849 )
2020-05-23 17:17:51 -04:00
jamesagnew
9192d41448
Credit for #1637
2020-05-23 17:16:19 -04:00
Jacob Stampe Mikkelsen
262a964a31
Add index on CONCEPT_PID on TRM_CONCEPT_PROPERTY to optimize a full-reindex of lucene index which can be needed when running in a docker container where the lucene files are discarded on redeploy. ( #1637 )
...
Co-authored-by: James Agnew <jamesagnew@gmail.com>
2020-05-23 17:11:21 -04:00
James Agnew
e780a8402e
Use R5 snapshot generator ( #1862 )
...
* Use R5 snapshot generator
* Snapshot generator reworking
2020-05-23 12:54:19 -04:00
James Agnew
c374383b37
Allow AuthorizationInterceptor to properly authorize GraphQL statements ( #1864 )
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* Allow AuthorizationInterceptor to properly authorize GraphQL statements
* Add changelog
2020-05-22 20:40:37 -04:00
IanMMarshall
12f80b3da5
Merge pull request #1863 from jamesagnew/im_20200520_cascade_delete
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Im 20200520 cascade delete
2020-05-22 16:17:08 -04:00
IanMMarshall
a1a3d9de38
Merge branch 'master' into im_20200520_cascade_delete
2020-05-22 16:11:38 -04:00
jamesagnew
056721829d
License header updates
2020-05-22 15:56:14 -04:00
Tadgh
d1b963321a
MVP EMPI implementation ( #1857 )
...
EMPI Initial Implementation (still plenty of known gaps)
2020-05-22 15:03:20 -04:00
IanMMarshall
612fb215d6
Update hapi-fhir-jpaserver-api/src/main/java/ca/uhn/fhir/jpa/api/config/DaoConfig.java
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Co-authored-by: James Agnew <jamesagnew@gmail.com>
2020-05-22 13:50:42 -04:00
IanMMarshall
51604dab2c
Update hapi-fhir-jpaserver-api/src/main/java/ca/uhn/fhir/jpa/api/config/DaoConfig.java
...
Co-authored-by: James Agnew <jamesagnew@gmail.com>
2020-05-22 13:50:35 -04:00
IanMMarshall
44869856da
Update hapi-fhir-base/src/main/java/ca/uhn/fhir/interceptor/api/Pointcut.java
...
Co-authored-by: James Agnew <jamesagnew@gmail.com>
2020-05-22 13:50:24 -04:00
ianmarshall
6a5c23c36b
Adding a proposed change log.
2020-05-22 13:45:17 -04:00
ianmarshall
b501a601b7
Some final cleanup minor updates.
2020-05-22 13:36:08 -04:00
ianmarshall
a60e5809b2
Changes to enable adjusting limits on delete conflict handling through configuration.
2020-05-22 10:15:04 -04:00
jamesagnew
e22549e0c4
Bump MySQL JDBC driver version
2020-05-21 21:21:13 -04:00
jamesagnew
5ba7f1525f
Test fix
2020-05-21 20:38:11 -04:00
jamesagnew
8ff7d5407a
Bump core version
2020-05-21 19:22:28 -04:00
Ken Stevens
2360ed4abe
fix build ( #1861 )
2020-05-21 19:22:08 -04:00
James Agnew
63ff0ede9c
Make diff operation work securely ( #1859 )
...
* Make diff operation work securely
* Build tweak
* FIx tests
2020-05-21 19:20:48 -04:00
James Agnew
ce5ade53d9
Fix #1855 - StructureDefinition search not working ( #1858 )
2020-05-21 09:35:37 -04:00
James Agnew
e07e071130
Avoid deserialization issues in subscription delivery ( #1856 )
...
* Avoid deserialization issues in subscription delivery
* Add changelog
2020-05-21 05:47:39 -04:00
James Agnew
5b2181a563
Implement FHIR Patch ( #1850 )
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* Start working on FHIRPatch
* More work on fhirpatch
* Work on FHIR Patch
* Add patch
* Test fixes
* Test fixes
* Get tests fixed
* Chnage to trigger a build
* Compile fix
* Dependency version fixes
* Test fix
* COmpile fix
* Try to fix build
* Test fix attempt
* Another build attempt
* Another build tweak
* Cleanup
2020-05-20 19:43:55 -04:00
jamesagnew
b044d05332
Add a disabled test
2020-05-20 17:26:24 -04:00
James Agnew
9aaf5ccd63
Fix expunge when using unique search param ( #1854 )
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* Fix expunge when using unique search param
* Add chaneglog
2020-05-20 15:58:53 -04:00
jamesagnew
8ab80e3529
Credit for #1853
2020-05-20 10:54:38 -04:00
