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3066 Commits

Author SHA1 Message Date
James Agnew 9939785713 Merge branch 'master' of github.com:jamesagnew/hapi-fhir 2017-06-27 21:13:04 -04:00
James Agnew a0004c9166 Fix issue in calling JPA server transactions programmatically where 
resources
            are linked by object reference and not by ID where indexes
				were not correctly
				            generated. This should not affect most users.
 2017-06-27 21:12:20 -04:00
James 6d55ef59a6 Comment cleanup 2017-06-26 06:23:03 -04:00
Vadim Peretokin d5fc780226 Added link to model API STU3 2017-06-26 11:57:00 +02:00
James 70a396f703 Credit for #678 2017-06-25 10:01:05 -04:00
James Agnew 4eb9f2d26a Merge pull request #678 from jamesagnew/validate-subscription-criteria 
Fix subscription query maximum number of results
 2017-06-25 09:59:21 -04:00
James Agnew 79378772b7 Fix broken example 2017-06-20 15:01:28 -04:00
James 87feb35418 Correct typo in example 2017-06-20 05:34:09 -04:00
Jeff Chung 0b578e3b0b Merge branch 'master' of https://github.com/jamesagnew/hapi-fhir into validate-subscription-criteria 2017-06-19 14:13:50 -07:00
James Agnew e147cf321d Fix #674 - Avoid duplicates in $everything query 
Squashed commit of the following:

commit f3097f423f
Author: James Agnew <jamesagnew@gmail.com>
Date:   Mon Jun 19 13:24:29 2017 -0400

    more travis fun

commit a4b8161597
Author: James Agnew <jamesagnew@gmail.com>
Date:   Mon Jun 19 10:43:33 2017 -0400

    More fighting with travis

commit fe47d1e864
Author: James Agnew <jamesagnew@gmail.com>
Date:   Mon Jun 19 10:10:55 2017 -0400

    More travis attempts

commit 4fdfe7a4e8
Author: James Agnew <jamesagnew@gmail.com>
Date:   Mon Jun 19 09:25:04 2017 -0400

    Try and run unit tests in 2 threads to cut time.. Will travis like this?

commit 571045b63d
Author: James <jamesagnew@gmail.com>
Date:   Mon Jun 19 07:35:46 2017 -0400

    Paging now working

commit 526a1fa7d0
Merge: cebe881a15 55a67ae055
Author: James Agnew <jamesagnew@gmail.com>
Date:   Mon Jun 19 06:19:37 2017 -0400

    Merge branch '674_everything_improvements' of github.com:jamesagnew/hapi-fhir into 674_everything_improvements

commit cebe881a15
Merge: b3b9273ca7 5789cd2a46
Author: James Agnew <jamesagnew@gmail.com>
Date:   Mon Jun 19 06:19:12 2017 -0400

    Merge branch 'master' into 674_everything_improvements for #674

commit b3b9273ca7
Author: James Agnew <jamesagnew@gmail.com>
Date:   Mon Jun 19 06:16:27 2017 -0400

    Work on everything fixes for #674

commit 55a67ae055
Author: James Agnew <jamesagnew@gmail.com>
Date:   Mon Jun 19 06:16:27 2017 -0400

    Work on everything fixes
 2017-06-19 13:56:38 -04:00
James Agnew f5a3ad6751 Note for #674 2017-06-19 13:56:25 -04:00
James Agnew 5789cd2a46 Merge branch 'master' of github.com:jamesagnew/hapi-fhir 2017-06-19 06:18:58 -04:00
James Agnew e6cb973f5f Add test 2017-06-17 08:29:30 -04:00
Jeff Chung ad3d5489ea Fixed FHIR subscriptions with criteria previously limited to 10, added fhir criteria validation before create/update, added dstu2 configurations 2017-06-16 14:25:57 -07:00
James 10fd88bfec Merge branch 'master' of github.com:jamesagnew/hapi-fhir 2017-06-16 10:53:32 -04:00
James Agnew e27ceead55 Fix test 2017-06-16 10:53:25 -04:00
James 76e3428d33 Merge branch 'master' of github.com:jamesagnew/hapi-fhir 2017-06-16 10:35:57 -04:00
James Agnew 1047c63f3c Add missing commit for JPA maximum fetch size 2017-06-16 10:35:39 -04:00
James b474a1f2ef Merge branch 'master' of github.com:jamesagnew/hapi-fhir 2017-06-16 10:00:27 -04:00
James 507cac3127 Respect prefer header on transaction processing 2017-06-16 09:52:12 -04:00
James Agnew 40a70b874c Merge branch 'master' of github.com:jamesagnew/hapi-fhir 2017-06-16 09:49:06 -04:00
James Agnew d40c5fa5e3 Add DAO setting to specify maximum query size 2017-06-16 09:41:45 -04:00
James Agnew 69849dd3c5 Optimize queries in JPA 2017-06-14 08:35:41 -04:00
James Agnew 959cb700fd Merge pull request #672 from jamesagnew/minute_precision_in_searchparams 
Minute precision in searchparams
 2017-06-12 11:50:09 -04:00
James Agnew d59b832e74 Merge branch 'master' into minute_precision_in_searchparams 2017-06-12 11:50:01 -04:00
James a50a86d9af Fix crash in JPA server if numeric search parameter has no value 2017-06-11 09:16:48 -04:00
James Agnew 404037b441 Fix some compile issues 2017-06-09 19:37:11 -04:00
James Agnew 7632cfa991 Fix local dependency 2017-06-09 19:21:04 -04:00
James Agnew 7588a2ecff Modify patch for #655 so that it fixes #604 without causing us to allow 
invalid values
 2017-06-09 16:30:20 -04:00
James Agnew e1cfc8212e Merge in patch from #655 2017-06-09 15:36:19 -04:00
christian ohr 872d72629c #604:allow MINUTE precision for datetimes 2017-06-09 15:21:53 -04:00
James Agnew c2e5fa3f18 Fix #667 - When using the AuthorizationInterceptor with the JPA server, when a client is updating a resource from A to B, the user now needs to have write permission for both A and B 2017-06-09 11:48:17 -04:00
James 14edc79ac1 Version bump to 2.6-SNAPSHOT 2017-06-09 07:28:29 -04:00
James 8b5209ff67 Version bump to 2.5 2017-06-08 06:34:44 -04:00
James Agnew b6e9a753ca Merge pull request #660 from HHSIDEAlab/fix-race-condition-in-if-none-exists 
Hacky but workable fix for race condition surfaced by If-None-Exists creates
 2017-06-07 21:51:05 -04:00
James Agnew b2f95f2d1c Merge pull request #668 from jamesagnew/revert-655-master 
Revert "Allow MINUTE precision for datetimes. Closes #604"
 2017-06-07 21:43:12 -04:00
James Agnew c04146a76a Revert "Allow MINUTE precision for datetimes. Closes #604" 2017-06-07 21:42:52 -04:00
James 401185baff Fix for #660 2017-06-07 21:39:38 -04:00
James Agnew 4caa5dfa8d Merge pull request #656 from aehrc/feature/scalable_searchbuilder 
Improve SearchBuilder query generation for code:modifier searches
 2017-06-07 21:35:50 -04:00
James 72fbd045d9 Credit for #656 2017-06-07 21:34:11 -04:00
James Agnew 1b557b05f0 Merge pull request #655 from ohr/master 
Allow MINUTE precision for datetimes. Closes #604
 2017-06-07 21:30:33 -04:00
James 1404aa02c4 Credit for #655 2017-06-07 21:29:16 -04:00
James Agnew 30b18c9a72 Merge pull request #652 from joelsch/upload-definitions-bugfix 
revise ValueSet/request-intent URL, to resolve CLI upload-definitions problem
 2017-06-07 21:23:09 -04:00
James d57a8a6c2b Credit for #601 2017-06-07 21:22:38 -04:00
James 993e99770d Merge branch 'master' of github.com:jamesagnew/hapi-fhir 2017-06-07 21:20:45 -04:00
James Agnew 7d5fbe7482 Merge pull request #649 from iceoss/rest-client-patch 
Null access fix for BaseClient exception handlers.
 2017-06-07 21:15:22 -04:00
James e03549daae Credit for #649 2017-06-07 21:14:53 -04:00
James Agnew 7c6bb01a8b Don't allow JPA server to save duplicate or empty tags, and fix #664 by 
preventing multiple threads from loading structure definitions for
validation at the same time
 2017-06-06 16:44:13 -04:00
Karl M. Davis aa134fc423 Hacky but workable fix for race condition surfaced by If-None-Exists creates. 
Some notes from other attempts I made to fix this in a less hacky way:

* Tried to @Autowire myResourceDaos from a setter (rather than using the annotation on a field), and initialize myResourceTypeToDao in that setter, instead. Couldn't get it to work: Spring started throwing odd bean dependency errors. Don't really understand why.
* Tried to move the exceptions being thrown on null getDao(Class) results into that method, but that was breaking a test case. Didn't investigate why.
 2017-06-01 03:17:38 -04:00
James Agnew 52a5fcce17 Adding logging 2017-05-30 15:39:33 -04:00