efe9cd1dd1
Work on term svc
2016-05-24 06:34:06 -04:00
ee031667c5
Fix #369 - FhirTerser cloneInto method fails if target contains extension
2016-05-23 09:20:40 -04:00
de65184afb
Fix tests
2016-05-21 20:52:37 -04:00
20b6994cc8
Fix #364 - Allow serializing custom types that contain custom datatypes
2016-05-21 14:35:10 -04:00
3d8776f6ed
Fix #363 - Allow remote references in JPA resources
2016-05-21 12:58:04 -04:00
6c3446dee1
Fix build
2016-05-17 11:30:57 -04:00
ddb35d0faa
Merge branch 'term_svc' of github.com:jamesagnew/hapi-fhir into term_svc
2016-05-17 09:05:47 -04:00
78fa6eaeaf
More work on terminology service
2016-05-17 09:05:37 -04:00
7942d69d5d
Accept conditional updates with _id as parameter
2016-05-16 19:11:25 -04:00
c7d191dc38
Fix all tests
2016-05-14 16:59:31 -04:00
d5e2170595
Don't discard _count from parameters when method has @Count
2016-05-13 19:13:39 -04:00
563f4e4c46
Treat date eq params correctly
2016-05-13 18:49:41 -04:00
84a7856c19
Treat missing ID in resource body as warning
2016-05-13 18:04:07 -04:00
abd8bc2f14
Work on term svc
2016-05-13 17:40:56 -04:00
c94f4bb19b
Work on term services
2016-05-11 06:30:45 -04:00
3e77d3e37e
Add _has support (this is an experimental parameter being tested)
2016-05-10 11:47:30 -04:00
81cb769d18
Allow operation names to be escaped in URL
2016-05-07 19:28:36 -04:00
af2b702aa4
Fixes from Montreal connectathon
2016-05-07 14:24:33 -04:00
2cf79d2767
Wrong comment, unable to set type in new versions
2016-05-05 15:23:50 +03:00
03e90b90c0
Merge pull request #359 from subhrajyotim/master
...
Fix: Add null check in JsonParser, Relax property handling introduced in Jaxp 1.5
2016-05-05 07:09:06 -04:00
ad9ff20f8e
Merge pull request #355 from euvitudo/jaxrsserver-with-dstu3
...
Updated jaxrsserver base and example for DSTU3
2016-05-05 06:58:17 -04:00
82c1e687fd
Fix NPE in LoggingInterceptor
2016-05-04 11:48:50 -04:00
ff562a3f00
Fix #360 - Correctly parse spaces in URL parameters
2016-05-04 10:09:02 -04:00
b4d3a7bb74
Don't highlight AJAX requests
2016-05-04 06:59:28 -04:00
284f0f14b0
Fix: Add null check in JsonParser, Relax property handling introduced in Jaxp 1.5 for some compatibility with existing 1.4 version
2016-05-04 15:24:36 +05:30
244cad6224
Allow validator exceptions to be ignored via confoguration
2016-05-03 21:58:09 -04:00
cce0ce6b8e
Add parser for URL parameters to avoid Servlets using ISO-8859-1 instead of UTF-8
2016-05-03 08:58:56 -04:00
804149205a
Work on getting tests passing
2016-05-02 11:42:55 -04:00
c90795ccef
Merge branch 'master' of github.com:jamesagnew/hapi-fhir
2016-05-02 09:03:48 -04:00
27ec35338a
Update to latest structure defs and validator
2016-05-01 21:31:14 -04:00
e3e81ff202
Fix #352 - Client should auto download resource if server ignores prefer header
2016-05-01 09:30:12 -04:00
31d16fca03
Updated jaxrsserver base and example for DSTU3
...
Added support for specifying DSTU3 in the constructors, where the default is DSTU2, to maintain backwards compatibility.
Updated interface usage to IBase... (e.g., IResource -> IBaseResource), which is compatible with DSTU3.
Added tests specifically for DSTU3; kept the existing tests as DSTU2.
Provided examples for DSTU3.
2016-04-29 12:50:15 -06:00
2d81612cd8
Fix #350 - Correct serialization for custom types which have fields
...
replacing other fields
2016-04-28 13:25:20 -04:00
8b3dd4234c
Fix tests
2016-04-25 08:01:16 -04:00
3fce4cb087
Fix #344 - make getResourceDefinition(String) and getElementDefnition(String) case insensitive
2016-04-25 07:19:31 -04:00
d45a9b67dc
Allow forced IDs to be reused between resource types
2016-04-24 19:24:55 -04:00
514da88787
Improve performance in parser when parsing large bundles
2016-04-23 13:54:16 -04:00
3eb805fb0a
Respect _format=application/xml+fhir
2016-04-23 12:17:27 -04:00
941091dbf7
Deprecate fluent search without an explicit bundle type declaration
2016-04-23 10:15:13 -04:00
d76e0008ac
Fix #342 - The HTTP 400 if request fail to parse
2016-04-22 07:19:57 -04:00
38e80531bb
Bump version to 1.6-SNAPSHOT
2016-04-22 07:05:05 -04:00
dd3f1dd33c
Fix #345 - ResponseValidatingInterceptor throws an exception with response has no content
2016-04-22 07:04:14 -04:00
fcf0604e98
Site doc updates
2016-04-21 07:15:01 -04:00
2c665d1b39
Merge branch 'master' of github.com:jamesagnew/hapi-fhir
2016-04-19 21:58:37 -04:00
81fa46820a
Correctly support _summary=search option
2016-04-19 21:58:20 -04:00
3a0de6e6f8
Fix #339 - Disable XXE XML parsing vulnerability
2016-04-19 07:55:24 -04:00
153c3ac5aa
Merge branch 'master' of github.com:jamesagnew/hapi-fhir
2016-04-18 10:07:22 -04:00
54f89073fe
Add option to validation uploader to specify FHIR version
2016-04-18 10:07:09 -04:00
f3a41570d3
Try to get tests workign on Travis.. yet again
2016-04-17 19:25:11 -04:00
846e216c04
Fix tests
2016-04-17 12:58:36 -04:00
5a818a38e8
FIx tests
2016-04-17 10:49:16 -04:00
1af65ff5a8
Fix #335 (also fixes #336 ) - Correctly parse and serialize IDs on elements within a resource
2016-04-17 10:12:34 -04:00
3f2b5fdeb7
Get security interceptor working
2016-04-16 10:22:43 -04:00
533c0c87ab
Fix tests
2016-04-14 09:14:32 -04:00
72640dc720
Correct encoding order for DSTU2 resources
2016-04-14 07:53:37 -04:00
8a37ed3b59
Merge branch 'master' of github.com:jamesagnew/hapi-fhir
2016-04-14 06:38:08 -04:00
0780b7e472
Add tests
2016-04-14 06:36:29 -04:00
a090f5481f
Try to get cobertura working
2016-04-13 10:33:58 -04:00
072ec29f13
Fix build error
2016-04-11 10:52:27 -04:00
d7c683f6b9
Merge branch 'master' of github.com:jamesagnew/hapi-fhir
2016-04-11 09:08:34 -04:00
2f37015d57
Clean up parsers so that elements are always encoded according to their order in the structures that contain them
2016-04-11 08:36:12 -04:00
88157fe1a6
Test data uploader fixes
2016-04-08 16:31:42 -04:00
5cd13bc73f
Improve error logging when the wrong version structure is passed into a parser
2016-04-07 13:55:38 -04:00
39fc134482
Fix #326 - Correctly serialize DSTU3 references in JsonParser. Thanks to
...
@fw060 for the patch!
2016-04-05 16:33:29 -04:00
079f966086
Parser enhancements when parsing bundles
2016-04-05 08:59:24 -04:00
891dddff1e
Work on auth interceptor
2016-04-04 06:21:49 -04:00
45390ebc89
Don't parse 1974-12-25+10:00 as this is not a valid FHIR time
2016-04-03 18:45:08 -04:00
20e04a7c80
Merge branch 'dstu3_structs'
2016-04-03 18:16:02 -04:00
18b3d0df65
Update to DSTU3 Montreal definitions
2016-04-03 18:14:31 -04:00
6d0dcc0213
More work on auth module
2016-04-02 08:59:01 -04:00
c345209ce4
Fix #318 - Apply setDefaultTypeForProfile to contained resources
2016-04-01 17:10:49 -04:00
21b42acc94
Update licenses
2016-03-29 13:01:51 -04:00
46ba27ec8f
Work on security interceptor
2016-03-28 20:51:27 -04:00
b2f11e0bfc
Fix #317 - Allow search params to be used when doing REST operations
2016-03-26 13:44:54 -04:00
6ffb1c8c56
Fix #312 - Don't fail if extension list contains a null
2016-03-25 19:27:18 +01:00
f49130baf8
Add unit tests and documentation to the JAX-RS client implementation
2016-03-25 19:17:41 +01:00
f9fa6265df
Correctly handle JPA search by token with system but no code
2016-03-25 16:20:43 +01:00
c6f06548fc
Fix #315 - Use custom types for searches and other client operations
...
when requested
2016-03-24 11:09:41 +01:00
1adfc4b4d9
Fix #315 - Allow declaring of custom types for specific profiles
2016-03-22 11:46:08 +01:00
ab4deb406c
Allow runtime query of bound enum type
2016-03-18 19:41:43 +01:00
82c6d82444
Sere up Binary resources as binary content even if the browser puts
...
application/xml in the Accept header
2016-03-18 18:38:44 +01:00
9aa7eea274
Add mode to parser to force it to not encode certain elements when serializing
2016-03-16 07:53:21 -04:00
00ced6a652
Improve performance of _lastUpdated queries in JPA server
2016-03-14 06:31:45 -04:00
6ddf91d9e2
Correctly handle extended operation in annotation based client where the
...
response is a raw resource and not a Parameters resource
2016-03-12 15:10:02 -05:00
452316aed7
Fix #313 - Do not treat OPTIONS [base]/foo as a request for server's
...
conformance statement. Thanks to Michael Lawley for reporting!
2016-03-12 14:53:20 -05:00
ce253bed70
Properly deserialize bound codes
2016-03-12 13:23:55 -05:00
232afee955
Improved error messages for #305
2016-03-11 07:56:00 -05:00
ed92f64e52
Fix #305 - Don't allow update resource body IDs to be missing or incorrect
2016-03-10 07:44:05 -05:00
3897167518
Return correct bundle type on $everything operation
2016-03-09 23:11:40 -05:00
8de41ca8b4
Attempting to reduce memory usage during tests
2016-03-06 14:38:18 -05:00
99a4b2c29e
Refactor JPA SearchBuilder
2016-03-05 20:46:04 -05:00
b147083f5a
Fix #308 - Remove unneded warning on parsing declared extension
2016-03-02 22:18:33 -05:00
970bc3ed89
One more test for #304
2016-03-02 07:29:09 -05:00
94f50686bc
Fix #304 - Better error message if wrong generic type is used
2016-03-02 07:06:17 -05:00
3fd9f9518a
Handle unexpected extensions when parsing using IParserErrorHandler
2016-03-02 06:52:46 -05:00
496d866f48
Fix #274 - Primitive elements with no value but an extension were sometimes not encoded correctly in XML, and sometimes not parsed correctly in JSON.
2016-02-28 22:15:43 -05:00
66ec863bde
Fix build
2016-02-28 21:19:39 -05:00
ed5bffba9e
Fix #299 - Don't crash if the client receives extensions in Bundle.entry.search
2016-02-28 19:38:54 -05:00
c7d3f39457
Fix #296 - Handle :missing qualifier on QuantityParam
2016-02-28 18:32:43 -05:00
d8c571dfdc
Just some cleanup
2016-02-28 18:25:20 -05:00
c14a1330b4
Fix #302 - Don't crash server when adding profiles
2016-02-28 16:07:28 -05:00
524b16b1e8
Fix header generation for clients
2016-02-28 15:44:10 -05:00
1da5855c9c
Add Eclipse files to git
2016-02-28 14:02:29 -05:00
f1e1ee9ff9
Merge JAX-RS client fixes
2016-02-28 13:34:57 -05:00
69450c7dab
Merge branch 'master' into jaxrs-client
2016-02-27 09:48:36 -05:00
7fdbee6f21
Merge branch 'master' of github.com:jamesagnew/hapi-fhir
2016-02-26 18:20:32 -05:00
39f6420066
Start working on compartment support
2016-02-26 18:16:35 -05:00
d383b402d1
Correct handling of Binary resources in client and server where the
...
binary contains embedded FHIR content
2016-02-25 14:31:26 -08:00
4a26064cd6
In the client, the create/update operations on a Binary resource (which
...
use the raw binary's content type as opposed to the FHIR content type)
were not including any request headers (Content-Type, User-Agent, etc.) Thanks to Peter Van Houte of Agfa Healthcare for reporting!
2016-02-25 12:54:52 -08:00
d11cbab15c
Don't add WWW-Authenticate header to response on AuthenticationException
2016-02-25 11:03:04 -08:00
d64cf57b0d
Inclusion of jaxrs-client : complete removal of the dependencies for jaxrsserver project to apache httpclient and httpcore and only rely on jax-rs
2016-02-25 13:38:31 +01:00
f8ea639af9
Merge remote-tracking branch 'remotes/petervanhoute/jax-rs-client': inclusion of jaxrs client by addition of interfaces around the apache client classes
2016-02-24 18:04:49 +01:00
1ba0ae3960
Support inline match URL references, per Simone's requast for the next
...
connectathon
2016-02-23 13:12:30 -08:00
fd2eaff12d
Fix javadoc
2016-02-19 06:53:23 -05:00
6ce4056f7a
Fix #298 - Don't handle /metadata for methods other than GET
2016-02-19 06:40:07 -05:00
43bdfc0345
Fix #297 - Resource not populated in ActionRequestDetails for validate method
2016-02-19 06:21:05 -05:00
4975d212fa
Add userdata map to interceptors which can be passed around
2016-02-17 08:05:55 -05:00
9b304748ad
Work on terminology service
2016-02-16 21:29:00 -05:00
c1141eb18f
Reorganize how search param prefixes are handled and modelled based on new DSTU2 style prefixes
2016-02-15 10:05:39 -05:00
23f9292b50
Add support for comments in XML and JSON parsing/encoding
2016-02-08 22:05:17 -05:00
961cde41bd
Merge branch 'master' of github.com:jamesagnew/hapi-fhir
2016-02-08 14:22:20 -05:00
f21851099c
Version bump
2016-02-08 13:59:09 -05:00
d93c54c0aa
Version bump to 1.5
2016-02-06 14:18:56 -05:00
0ff111be87
Fix #291 - Don't fail the server for untyped list returns
2016-02-06 14:18:04 -05:00
f9e4398c89
fix pom
2016-02-05 14:59:10 +01:00
68b816dce7
Prepare for 1.4 release
2016-02-03 16:56:32 -05:00
e0e52f96c6
Version bump to 1.4 (finally!)
2016-02-03 15:25:32 -05:00
def7fc93e0
Merge pull request #289 from petromykhailysyn/master
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ServletContextPath can start with servletPath, it should be taken into consideration
2016-02-03 14:06:18 -05:00
93d9011691
Fail server if conditional param is not of type String
2016-02-02 07:11:18 -05:00
32daeb6f58
Switch DSTU2.1 to DSTU3 per FMB's decision
2016-02-01 08:55:58 -05:00
914f615b8e
Merge branch 'master' of github.com:jamesagnew/hapi-fhir
2016-01-28 11:35:16 -05:00
ecc48317f2
Version bump dependencies
2016-01-28 08:31:19 -05:00
00f0ea4a0b
Merge branch 'master' of github.com:jamesagnew/hapi-fhir
2016-01-27 08:36:10 -05:00
1bc35f1ba3
Support modifiers on token parameters
2016-01-27 07:05:41 -05:00
a7313023f7
Revert "If servletContextPath is not root (application is deployed not to the root) we should take it into consideration while determinating server base."
...
This reverts commit 0e3bb5a797
2016-01-26 17:02:24 +02:00
83823aad35
ServletContextPath can start with servletPath, now it's taking into consideration while determinate contextIndex.
2016-01-26 16:29:16 +02:00
7ed14d538a
Remove warning
2016-01-24 14:53:40 -05:00
0e3bb5a797
If servletContextPath is not root (application is deployed not to the root) we should take it into consideration while determinating server base.
2016-01-22 10:42:36 +02:00
0f835b5e55
Exposing http client request pool max parameters on restful client factory:
...
* added setters on restful client factory to allow changing max total connections and max connections per route for pooling http connection manager
* added defaults for max total connections and max connections per route on restful client factory interface
2016-01-20 11:50:49 -05:00
1ba03f4a9b
Fix #283 - Remove servlet 3.0 dependency where possible
2016-01-20 08:11:03 -05:00
944afc2785
Add better constructors for date types
2016-01-20 07:40:57 -05:00
f9960b22d5
Clean up validation
2016-01-15 18:44:28 -05:00
d290110126
Fix validation
2016-01-15 18:02:20 -05:00
589059256f
Correct issues uncovered during connectathon
2016-01-11 07:42:13 -05:00
8dadc77420
create jax-rs client
2016-01-08 12:01:56 +01:00
b6d3a003d3
move client api-classes into api package
2016-01-08 11:47:00 +01:00
1271c36d1b
create a jax-rs client
2016-01-08 10:50:04 +01:00
c1afb4f54d
Get overlay working for DSTU2.1
2016-01-07 15:04:56 -05:00
0c8c414784
Try to get travis working
2016-01-07 11:17:54 -05:00
479da24cfb
Bump license files
2016-01-07 08:50:07 -05:00
a54cb06c03
More travis cleanup
2016-01-06 14:02:20 -05:00
56620eebfb
Clean up testpage-overlay to work with DSTU2.1
2016-01-06 08:49:24 -05:00
2e434650ea
Fixed to testpage overlay for DSTU2.1
2016-01-05 17:02:37 -05:00
b7aa4e15b9
Merge branch 'master' of github.com:jamesagnew/hapi-fhir
2016-01-05 08:31:24 -05:00
59da230702
Improving validation documentation
2016-01-05 07:20:54 -05:00
7005cd52d9
Performance tweaks to the validator and get the DSTU2.1 endpoint working
...
with validation
2016-01-04 17:57:00 -05:00
685bd9345b
Add request/response validator interceptors
2016-01-03 21:52:11 -05:00
5789db8743
Remove dependency on cobertura at compile time
2016-01-02 10:55:52 -05:00
c8365ab566
Fix build
2016-01-01 23:18:44 -05:00
718a26671f
DSTU2.1 structures working
2016-01-01 16:59:19 -05:00
056900f324
Lots more work on DSTU2.1 structures
2015-12-30 11:27:12 -06:00
7692e5d714
More work on DSTU2.1 structs
2015-12-22 09:32:06 -05:00
2469aa3725
Lots of DSTU2.1 structure work
2015-12-20 23:35:47 -05:00
aaf85f2323
Lots of work on DSTU2.1 structures
2015-12-20 09:29:52 -05:00
6ac62a5b46
Merge branch 'master' into hl7org_dstu21
2015-12-15 20:33:31 -05:00
3005c9a766
Still working on unit tests
2015-12-15 09:11:01 -05:00
22ff1db183
Work on tests
2015-12-15 07:14:21 -05:00
2b0a800d98
travis....
2015-12-14 22:44:05 -05:00
c8535b72b6
More travis
2015-12-14 22:34:53 -05:00
0bf5172de6
More travis work
2015-12-14 22:28:03 -05:00
b2a9836cda
More logging to try and figure out the travis failures
2015-12-14 22:12:54 -05:00
a623003a56
Fix #240 - Support target resource type in server _include and _revinclude values
2015-12-14 21:50:35 -05:00
d95bd269c0
Correctly encode value[x] field names when the datatype is a profiled type such as markdown
2015-12-14 21:04:27 -05:00
2eaa1eddae
Fix compile
2015-12-14 18:22:21 -05:00
9ef0498775
Merge branch 'master' of github.com:jamesagnew/hapi-fhir
2015-12-14 10:56:33 -05:00
97d6d09663
Work on #240 - Not yet working in JPA
2015-12-14 08:17:33 -05:00
68bb244328
Lots of work on new structures
2015-12-13 22:44:41 -05:00
117f9eb977
Merge branch 'master' of github.com:jamesagnew/hapi-fhir
2015-12-10 08:24:30 -05:00
85ec9d9264
Work on 2.1 structures
2015-12-10 08:24:12 -05:00
0a0daedcfd
Still not working DSTU2.1
2015-12-09 22:49:02 -05:00
67eb06665e
Work on test indexing
2015-12-03 22:41:37 -05:00
8ed9ca83af
Fix build
2015-12-03 21:52:40 -05:00
547b5290a4
Update resource defs
2015-12-01 18:35:24 -05:00
4398040451
Add count(int) method to fluent client search
2015-12-01 10:22:50 -05:00
07078e4ce3
Add GZip support to client and server for client-to-server uploads
2015-11-29 15:03:28 -05:00
d47e0e5e77
Add DSTU2.1 resources
2015-11-29 11:43:09 -05:00
e6b47855e6
Merge branch 'master' of git://github.com/petervanhoute/hapi-fhir into petervanhoute-master
2015-11-27 14:59:53 -05:00
00be143207
Merge branch 'master' of github.com:jamesagnew/hapi-fhir
2015-11-26 07:03:14 -05:00
a046afe1d0
Merge pull request #259 from nrpeterson/boundcodeableconcept-serialization
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Add serializability for BoundCodeableConceptDt
2015-11-26 06:59:14 -05:00
14e326c2bd
Merge branch 'master' of github.com:jamesagnew/hapi-fhir
2015-11-26 06:57:08 -05:00
9c9ffe1fb7
Remove dependency on JDK 7
2015-11-26 06:56:52 -05:00
1fe3bb9ff0
Updates from DevDays
2015-11-23 06:13:02 -05:00
13b3601843
Make IBoundCodeableConcept and IValueSetEnumBinder extend java.io.serializable; add a test to verify that MaritalStatusCodesEnum in DSTU2 is now serializable.
2015-11-20 12:15:31 -08:00
c78be081ef
Add CLI test
2015-11-20 10:30:10 +01:00
2f12c9ed01
Bump version to 1.4-SNAPSHOT
2015-11-15 20:11:05 -05:00
f9f33f059b
Version bump to 1.3
2015-11-15 12:53:02 -05:00
6fd5aecec7
Fix #250 - Honour Accept: text/xml and Accept: text/json
2015-11-05 07:32:33 -05:00
3fc7a16735
Fulltext searching works
2015-11-02 08:12:36 -05:00
63db1b646f
test in weblogic: fix interceptor + stateless on abstract
2015-10-30 11:35:11 +01:00
2cc88d76eb
Cleasn up JPA interceptors
2015-10-29 16:44:51 -04:00
jamesagnew
Virdulys
Subhro
Phillip Warner
petervanhoute
petromykhailysyn
Matt Blanchette
Nick Peterson