7517f181c7
Fix up rendering of profile names for abstract profile instantiations
2023-09-20 11:13:43 +10:00
366cb85506
Fix up handling of includes in liquid templates
2023-09-20 11:13:21 +10:00
eecc6633d3
Improved rendering of codes in include when rendering valuesets
2023-09-20 11:12:50 +10:00
8a81237bd0
Better handling of errors from tx.fhir.org
2023-09-20 11:10:20 +10:00
19e651b7bf
minor fixes from testing
2023-09-19 10:37:10 +10:00
d3ba55018b
fix for abstract types
2023-09-19 10:09:32 +10:00
46c12d1a22
Performance improvements for type handling, and rename NamedElement to ValidatedFragment
2023-09-19 09:58:36 +10:00
30dfcfe3a6
turn logging off in JsonParser
2023-09-18 17:06:46 +10:00
ebf706b837
Fix NPE in version comparison
2023-09-18 17:06:31 +10:00
0565b27f02
more performance improvements
2023-09-17 16:54:47 +10:00
ea7cd290a8
More performance improvements for JsonParser
2023-09-17 15:45:02 +10:00
e7010d7af0
Add support for .index.db
2023-09-15 22:01:12 -07:00
a68ba66d1a
Updating version to: 6.1.7-SNAPSHOT and incrementing test cases dependency.
2023-09-15 22:58:19 +00:00
43e73b1281
Release: v6.1.6
...
## Validator Changes
* Add R4B binding-definition URL to validator exception list
* Correct validation when CodeSystem.content = example and server doesn't know code system
* Fix bug processing CDA snapshots
* Fix issue evaluating FHIRPath correctness on CDA.Observation
* Improve error message from validator when invariants fail
* Fix NPE validating concept maps
* Add parameter for easy CDA validation
* Suppress wrong invariants on compiler magic types
* fix NPE checking codes
## Other code changes
* Improve CodeSystem rendering - make parent property a link
* Add file tracking when npm package performing file unpacking
* Remove env variables from path builder
* Fix bug in version comparison
* fix for NPE in HAPI
* Performance improvements for IG Publisher
* Start working on cross-version extensions
* Improve rendering of message about logical target
***NO_CI***
2023-09-15 22:32:55 +00:00
65ea3ddf95
Merge remote-tracking branch 'origin/master'
2023-09-15 13:13:40 -07:00
daf69cef37
fix NPE checking codes
2023-09-15 12:46:56 -07:00
6b5ca97aa8
Fix error in Comparisons
2023-09-15 12:46:45 -07:00
34a029d5df
cross-version extensions
2023-09-15 10:15:50 -07:00
71def00e24
Improve rendering of message about logical target
2023-09-15 10:15:31 -07:00
d40006ba8c
Performance improvements for IG Publisher
2023-09-15 10:13:53 -07:00
a59a9619d9
Improve error message from validator when invariants fail
2023-09-15 10:13:02 -07:00
55c800e80d
fix issue evaluating FHIRPath correctness on CDA.Observation
2023-09-14 19:38:06 -07:00
f72dfa83ef
fix for NPE in HAPI
2023-09-14 19:31:15 -07:00
771947a958
remove unused code
2023-09-14 19:31:04 -07:00
906c7dea45
fix bug processing CDA snapshots
2023-09-14 19:29:50 -07:00
518adf9826
Correct validation when CodeSystem.content = example and server doesn't know code system
2023-09-13 05:40:13 -07:00
aa46d3698d
make parent property a link
2023-09-12 15:47:35 -07:00
a8967b378f
Updating version to: 6.1.6-SNAPSHOT and incrementing test cases dependency.
2023-09-11 01:26:15 +00:00
a09216c6e8
Release: v6.1.5
...
## Validator Changes
* no changes
## Other code changes
* Add baseUrl and version methods to r5 CanonicalType
***NO_CI***
2023-09-11 01:00:01 +00:00
ef401d0fe8
canonical helper methods
2023-09-10 13:12:05 -07:00
30ed1bf615
Updating version to: 6.1.5-SNAPSHOT and incrementing test cases dependency.
2023-09-10 01:22:26 +00:00
1c24341056
Release: v6.1.4
...
## Validator Changes
* Fix bug preventing Best Practice invariants being reported on, and add -best-practice parameter
* Fix issue not validating bundles when there are multiple profiles on entry.resource
* Add Japanese translations
## Other code changes
* Fixes for minor bugs discovered testing the XIG
* fix package program data path
***NO_CI***
2023-09-10 00:51:54 +00:00
eef084f4b3
Merge pull request #1427 from hapifhir/do-20230905-fix-system-cache-directory
...
Fix system cache directory
2023-09-10 09:29:57 +10:00
3a6e6fe39a
more xig related fixes
2023-09-08 13:03:51 +10:00
493f2f51f2
more xig fixes
2023-09-08 12:15:52 +10:00
71ff6a81db
Another XIG fix
2023-09-08 10:22:13 +10:00
f67596f25b
fix for npe in xig
2023-09-08 10:07:06 +10:00
307623fd05
Fix failing tests due to jvm difference
2023-09-08 09:00:05 +10:00
6b38a730e9
SHC signature verification
2023-09-08 07:35:11 +10:00
4e92a7759a
fix bug overwriting source package on canonical resources
2023-09-07 17:06:24 +10:00
c270f1761f
Allow suppressing snapshot errors for XIG
2023-09-07 17:05:23 +10:00
430833616a
Merge branch 'master' into do-20230905-fix-system-cache-directory
2023-09-06 09:26:05 -04:00
980f04557c
Updating version to: 6.1.4-SNAPSHOT and incrementing test cases dependency.
2023-09-06 08:22:50 +00:00
6d37127e63
Release: v6.1.3
...
## Validator Changes
* Test concept map code validity
* Rework type checking on target profiles to support imposesProfile
* Fix imposesProfile extension being missed on primary profile
* Add support for IPS-AU
* Fix warning/error message about experimental property on CodeSystems and ValueSets
* Fix unknown code message to include code system version
* Add provisional SHLinks validation
## Other code changes
* Render Requirements.reference
* Convert Requirements.reference between versions
* Fix test that breaks on local machines + Fix system path for FileSystemPackageCacheManager
* Update to cqframework 2.11 and remove unused common-beanutils declaration (#1419 )
* Better xhtml logging for debugging
* Fix DF markdown engine to escape < properly
* Support for sub-packages in packagelist.json
* NPE proofing property handling for Code Systems
* rework the way intermediary content is handled in the validator
* Restore CodeQL regex queries (#1422 ) + Whitelist BSD 3-clause license
***NO_CI***
2023-09-06 06:12:07 +00:00
b980eeddf2
Render Requirements.reference
2023-09-06 09:51:09 +10:00
87f7984f8b
test concept map code validity
2023-09-06 09:12:25 +10:00
cf398fbbcd
Fix test that breaks on local machines
2023-09-05 15:36:33 -04:00
82813a88d2
Fix system path for FileSystemPackageCacheManager
2023-09-05 15:35:21 -04:00
beb89b575a
rework type checking on target profiles to support imposesProfile
2023-09-05 23:09:18 +10:00
68b30fe819
fix unknown code message to include code system version
2023-09-04 13:39:45 +10:00
808acb9d29
NPE proofing property handling for Code Systems
2023-09-04 13:38:37 +10:00
5cc4e3ef03
rework the way intermediary content is handled in the validator + fix impose-profile handling for IPS-AU
2023-09-04 13:38:22 +10:00
be4957c9af
fix typos
2023-09-02 23:35:00 +07:00
bfac7f06de
Add SHLinks validation
2023-09-02 23:21:32 +07:00
bca705a3c6
Updating version to: 6.1.3-SNAPSHOT and incrementing test cases dependency.
2023-08-31 13:58:37 +00:00
f5e218c279
Release: v6.1.2
...
## Validator Changes
* FHIRPath fixes checking types discovered testing R6 build
## Other code changes
* Fix rendering of impose-profile extension
* Improvements to performance tracking code
* get FHIRFormat from SHC code
***NO_CI***
2023-08-31 13:29:31 +00:00
ab8f84f492
Merge pull request #1421 from hapifhir/2023-08-gg-fhirpath-validation-fixes
...
2023 08 gg fhirpath validation fixes
2023-08-31 14:23:53 +02:00
3cd1119c2f
fix wording mistake
2023-08-31 13:09:09 +02:00
4bba1c2cde
fix bugs in FHIRPath checking and track special time when validating resources
2023-08-31 06:30:29 +02:00
8709e946d9
Get FhirFormat from shc code
2023-08-30 16:32:15 -04:00
2deb88cdc9
Merge remote-tracking branch 'origin/master'
2023-08-30 09:38:45 +02:00
119bfcba4e
Fixed Out Of Memory issue during resource validation with local reference check enabled ( #1413 )
...
* Fixed Out Of Memory issue during resource validation with local reference check enabled
* Fixed Out Of Memory issue during resource validation with local reference check enabled - fix
2023-08-29 13:29:22 -04:00
a78aa25c14
#1415 review system.out.println() statements
2023-08-29 19:21:45 +02:00
ac33590b96
#1412 - fix out of memory issues
2023-08-29 17:34:03 +02:00
9048983155
Updating version to: 6.1.2-SNAPSHOT and incrementing test cases dependency.
2023-08-29 08:56:09 +00:00
2f6c61af78
Release: v6.1.1
...
## Validator Changes
* Fix problem validating code systems with content = not-present
* Further development of multi-language support on the tx server, and:
* Change the validator so that the default language is '*' (all languages) not 'en'
## Other code changes
* Improve license scanning and readme documentation
* Change xpp3 dependency
* Add client version to tx user-agent requests
* Suppress spurious xml parsing messages to System.err
***NO_CI***
2023-08-29 08:27:41 +00:00
4201d51d63
Merge remote-tracking branch 'origin/master'
2023-08-29 09:18:56 +02:00
51003669db
no meld
2023-08-29 06:43:46 +02:00
f3112342d6
ping build
2023-08-28 21:06:28 +02:00
d0815682b8
Merge branch 'master' into language-rework
2023-08-28 20:13:42 +02:00
4e43c425b1
syntax fixes
2023-08-28 17:30:06 +02:00
47f5da6b3f
fix failing test
2023-08-28 16:50:49 +02:00
a22338cd54
fix up failing tests
2023-08-28 15:58:37 +02:00
9899906045
Suppress XML fatal errors to System.err
2023-08-28 12:57:01 +02:00
684f6bd740
fix test cases
2023-08-28 12:56:47 +02:00
84edac9abe
Better cache control
2023-08-25 18:43:36 +02:00
333ffc340e
Accept-Language
2023-08-25 16:21:56 +02:00
7eaa723ec9
rewrite the way language works in value sets
2023-08-25 13:09:36 +02:00
985b66c276
Add version to agent header
...
+ remove unused getValidationEngine methods in Common
2023-08-24 15:31:09 -04:00
490e57fa7c
Swap out xpp3 dependency
2023-08-23 15:51:44 -04:00
fb64a720c8
Updating version to: 6.1.1-SNAPSHOT and incrementing test cases dependency.
2023-08-22 17:26:57 +00:00
e90863a271
Release: v6.1.0
...
## Validator Changes
* Performance fix: Delay loading content when loading IGs
* CodeSystem validation around count and content
* Add checking around internal status consistency and across dependencies (draft/experimental/retired/deprecated)
* Improved error messages on server failure
* Fix bug in warning about No valid Display Names found
* Use Supplements when validating display names
* Fix issue in FHIRPath .combine focus handling
* Check Extension fixed values for URLs - enforce consistency
* Fix R4 FML parser problem
* Track and report inactive status when reported from terminology server
* Add defense against large terminology operations causing obscure java errors
* Fix bug with client sending too much data to tx.fhir.org (big performance hit in some cases)
* Fix obscure bug with designations in a more specific language the the code system they are in
## Other code changes
* Significant upgrade of version comparison for profiles/extensions, value sets, and code systems, and integration into rendering framework
* Many minor changes to terminology functionality (reconciliation with differences with OntoServer) including service protection
* Rename implySystem parameter to inferSystem per TI decision
* rework how definitions are handled after discussion with Michael
* add flat mode to tests for Ontoserver, and add experimental functionality
* fix rendering issue in subscription topic
* Add a renderer for ExampleScenario
* Automatically render markdown in code system concept definitions
* Fix loading issues in test mode for simplifier packages
* Remove spurious logging in FHIRPath engine
* Fix addChild error in PEBuilder (#1343 ) + Add test case
* CPT Importer
* Dependencies fixed/updated: okhttp, thymeleaf, commonmark & UCUM
* Xhtml fluent improvements + related XHtmlNode improvements
* Release new pubpack for new icons
* Json Object comparison: fix bug in arrays with multiple optional elements + improved error messages + support for external strings
* fix cross-version extensions web references where possible
* Don't suppress exceptions in terminology clients
* Add first cut of Profile Generation code
* Stop putting invalid codes in expansions if they are not in the code system
***NO_CI***
2023-08-22 17:01:34 +00:00
1b33d2a537
Bump minor version
2023-08-22 11:56:22 -04:00
54eb35fa1a
fix bug with client sending too much data to tx.fhir.org
2023-08-22 21:47:02 +10:00
e11f03bd8a
Fix erroneous handling of designations with a matching language to the base display
2023-08-22 12:08:53 +10:00
f795394fd2
Sorting ValueSet.expansion.contains in the tx tests
2023-08-21 19:35:10 +10:00
69d2a12a2b
fix bug handling invalid codes when expanding
2023-08-21 16:29:54 +10:00
2c6be77ee2
fix comparison logic
2023-08-21 11:06:04 +10:00
6d3e555620
First cut at profile code generation
2023-08-20 19:06:20 +10:00
390e25ddae
more test fixes
2023-08-19 22:46:23 +10:00
e4f6ec5a7b
more revisions to tests
2023-08-19 20:18:15 +10:00
497a81a544
Track and report inactive status when reported from terminology server
2023-08-19 20:17:42 +10:00
2acf546059
Don't suppress exceptions in clients
2023-08-19 20:15:29 +10:00
d2698f115c
debugging fix
2023-08-19 11:36:41 +10:00
1248bae5e4
$externals works like $fragments when no external string provided
2023-08-19 09:13:32 +10:00
b8d89d253e
fix cross-version extensions URLs where possible
2023-08-19 09:04:19 +10:00
6f0d54a8dc
terminology service bug fixes
2023-08-19 09:03:59 +10:00
fa54f7748e
fix java exception
2023-08-18 13:48:08 +10:00
a87e4728a4
fix bug in structure definition creating links to core spec
2023-08-18 13:47:53 +10:00
d571f48376
fix bug in compare utilities around json arrays with multiple optional elements
2023-08-18 13:47:34 +10:00
bb2e87c250
automatically process markdown in code system concept definitions
2023-08-18 13:47:16 +10:00
c32492a66b
improve error draft error where possible
2023-08-18 13:46:56 +10:00
87a9a58771
fix for testing IGs
2023-08-17 21:19:56 +10:00
f7c606e88b
rendering fixes for IGs
2023-08-17 18:29:59 +10:00
0d1072616e
rework comparison and related rendering
2023-08-17 18:14:12 +10:00
eacffd11df
Add support for external strings for tx tests
2023-08-17 11:14:34 +10:00
c71d3a107d
always return x-caused-by-unknown-system when system is unknown
2023-08-16 22:38:21 +10:00
57d1a973e4
fix return paths when validating codes
2023-08-16 22:38:01 +10:00
3cb9c195a0
change to used-xxx parameters instead of version
2023-08-16 22:37:48 +10:00
bf5a2ba768
More work on comparison functionality
2023-08-16 22:29:11 +10:00
976915f3bc
Merge branch 'master' into do-20230815-bump-okhttp-dependencies
2023-08-15 17:41:02 -04:00
dacc73a114
Bump okhttp dependency, exclude vulnerable transitives
2023-08-15 12:52:01 -04:00
ced8a36f37
Work on comparison and rendering for showing differences properly
2023-08-15 19:33:39 +10:00
ebc755bc2a
Check consistency between standards status and resource status
2023-08-14 21:11:49 +10:00
e3dd645b75
more differencing improvements
2023-08-14 15:36:08 +10:00
dd70d185df
improve error message when comparing JSON arrays
2023-08-14 15:35:53 +10:00
a57afef5a4
Fix up return issue code for unkown issues
2023-08-14 15:35:36 +10:00
0fc4398dfc
Rendering improvements for showing difference analysis (WIP)
2023-08-14 15:34:54 +10:00
b45f6caf60
Improve error message for unknown properties
2023-08-14 15:33:48 +10:00
9cde582732
Update Comparers for annotating models with version differences
2023-08-14 15:33:24 +10:00
1d4eefa62b
Rename implySystem to inferSystem per TI decision
2023-08-13 19:55:52 +10:00
2474c198c7
fix FML parser problem
2023-08-12 23:06:27 +10:00
a5ff5b50a8
rework how extensions are handled after discussion with Michael
2023-08-11 22:27:50 +10:00
ec31868486
improve version annotation presentation
2023-08-11 14:16:50 +10:00
9c65d7a20f
Fix for NPE validating codes
2023-08-11 14:16:29 +10:00
4a11c5ffe1
fix failing test
2023-08-11 14:16:15 +10:00
6041660e9b
Improved error messages on server failure
2023-08-11 14:16:09 +10:00
991a2defee
Start working on showing changes when rendering
2023-08-11 12:26:21 +10:00
b7fd419509
Check experimental / draft in mini terminology service
2023-08-11 12:25:37 +10:00
1208d691b2
Fix loading issues in test mode for simplifier packages
2023-08-11 12:25:01 +10:00
9625f9b818
remove spurious logging
2023-08-11 12:24:38 +10:00
d9df51fa63
Add test case for PE Engine based on issue #1343
2023-08-11 12:24:25 +10:00
b85b588825
restructure validators to properly validate deprecated dependencies
2023-08-11 12:24:08 +10:00
5aefd6a268
add flat mode to tests, and add experimental functionality
2023-08-11 12:11:22 +10:00
cce9d9cdac
Merge pull request #1388 from hapifhir/ExampleScenarioPause
...
Added support for pause
2023-08-10 00:05:00 +10:00
952dedd06b
#1343 - addChild error in PEBuilder
2023-08-09 19:48:01 +10:00
93868669fe
Fix issue in FHIRPath .combine focus handling
2023-08-09 16:29:08 +10:00
8d826aba44
fix rendering issue in subscription topic
2023-08-09 16:27:56 +10:00
d8c8f26e2b
Fix bad link in response
2023-08-08 19:55:17 -06:00
7155b940fd
Added support for pause
2023-08-08 14:18:50 -06:00
4b006f82ab
delay loading content when loading IGs
2023-08-08 21:36:46 +10:00
752f0e1983
fix bug in warning about No valid Display Names found
2023-08-08 19:58:51 +10:00
4c132852c0
include ExampleScenario renderer in factory and refactor
2023-08-08 19:58:27 +10:00
820a945807
Merge branch 'master' of https://github.com/hapifhir/org.hl7.fhir.core into ExampleScenarioRendering
2023-08-07 09:27:29 -06:00
6eeeb2400f
Removed debug code, handle escaping of aliases
2023-08-07 09:27:05 -06:00
9c3a6a7f37
Updating version to: 6.0.26-SNAPSHOT and incrementing test cases dependency.
2023-08-04 17:55:11 +00:00
bc3f348108
Release: v6.0.25
...
## Validator Changes
* Fix problem with evaluating extension contexts
* Fix up support for inactive codes and fix error message syntax
* Fix issue with collection status of resolve() being wrong
* Improved paths in profile error messages
* Fix problem with extension slicing being missed sometimes.
* Fix problem with code validation caching ignoring whitespace
* Produce useful error message when whitespace is wrong in display name
* Support for x-version extensions when generating snapshots
## Other code changes
* Render inactive property in expansions
* Resolve URL for x-version extensions
* Don't warn for loading a wrong version package more than once
* Do not supercede R4 terminology when loading R5 IGs
* Migrate type support when generating differentials
***NO_CI***
2023-08-04 17:27:42 +00:00
4727bc57ff
Fix up support for inactive codes and fix error message syntax
2023-08-04 18:44:40 +10:00
f1571ea2b4
Do not supercede R4 terminology when loading R5 IGs
2023-08-04 18:42:40 +10:00
e0b9a6dcc7
migrate type support when generating differentials
2023-08-04 18:42:18 +10:00
Grahame Grieve
markiantorno
Grahame Grieve
dotasek
volodymyr-korzh
dotasek
Lloyd McKenzie