Commit Graph

3717 Commits

Author SHA1 Message Date
Grahame Grieve 88d0cc8a68 fix issues with rendering example scenario 2024-10-06 15:22:26 +08:00
Grahame Grieve 0a03628e97 more work on translations in IGs 2024-10-05 06:40:51 +08:00
Lloyd McKenzie 17ac205210 Fix for issue identified https://chat.fhir.org/#narrow/stream/196008-ig-publishing-requirements/topic/Embedding.20fragments.20of.20examples.20in.20IG.20text 2024-10-02 22:40:13 -06:00
Grahame Grieve ae7b962d29 Fix bug processing modified differentials 2024-09-30 08:31:57 +10:00
markiantorno e8a0bba072 Updating version to: 6.3.30-SNAPSHOT and incrementing test cases dependency. 2024-09-26 12:30:18 +00:00
markiantorno 53ec745184 Release: v6.3.29
## Validator Changes

* remove spurious logging statement

## Other code changes

* no changes
***NO_CI***
2024-09-26 11:44:41 +00:00
Grahame Grieve 7bd5d3b7ce Merge remote-tracking branch 'origin/master' 2024-09-26 07:08:52 -04:00
Grahame Grieve bd53f7c011 remove spurious logging statement 2024-09-26 07:08:47 -04:00
markiantorno 8358354d2f Updating version to: 6.3.29-SNAPSHOT and incrementing test cases dependency. 2024-09-25 21:46:09 +00:00
markiantorno 569fe4b697 Release: v6.3.28
## Validator Changes

* Validator supports R6 from now on (using last stable release)
* Set default language to tag not display
* Handle tx server issues better
* Do not use server piecemeal when validating complex value sets
* Add support for -txCache parameter

## Other code changes

* Add support for R6 to R4 version enumeration
* Fix SCT link to include version and point to the right place
* Add response time to tx log
* Allow for code to turn off use of cache-id on tx interface (for debugging)
* Support n/a for tx cache folder
* Update tx cache for tests
* Add more logging for too costly validation
* Fix xml annotation suppression
***NO_CI***
2024-09-25 21:01:00 +00:00
Grahame Grieve fc5c54bcc2 fix npe in test case 2024-09-25 13:03:39 -04:00
Grahame Grieve 213d8f25f8 fix npe 2024-09-25 12:17:46 -04:00
Grahame Grieve 8595178336 fix for NPE 2024-09-25 10:21:57 -04:00
Grahame Grieve e38f40b0de fix xml annotation suppression 2024-09-25 10:08:58 -04:00
Grahame Grieve 7b0cf668ae Improved logging + fix failing test 2024-09-25 10:08:38 -04:00
Grahame Grieve 54353f8fce Add more logging for too costly validation 2024-09-25 05:15:49 -04:00
Grahame Grieve 176b0caf63 Do not use server piecemeal when validating complex value sets 2024-09-24 20:42:19 -04:00
Grahame Grieve cdaf85bf0b support n/a for tx cache folder 2024-09-24 20:34:23 -04:00
Grahame Grieve b05d4b35ea Handle tx server issue 2024-09-24 20:33:55 -04:00
Grahame Grieve 7479862a30 Allow for code to turn off use of cache-id on tx interface (for debugging) 2024-09-24 20:25:32 -04:00
Grahame Grieve a1f014730e Add response time to tx log 2024-09-24 20:25:02 -04:00
Grahame Grieve 98373c1fd5 Fix SCT link to include version and point to the right place 2024-09-23 09:12:01 -04:00
Grahame Grieve f868576840 Add support for R6 to R4 version enumeration 2024-09-23 09:11:46 -04:00
markiantorno be8944ab94 Updating version to: 6.3.28-SNAPSHOT and incrementing test cases dependency. 2024-09-22 18:36:30 +00:00
markiantorno 102e755283 Release: v6.3.27
## Validator Changes

* Work around problem with language value set being marked experimental
* Fix validation id/idref to resolve in document if in a document
* Fix various issues rendering and validating additional bindings with usage contexts
* Upgrade lock management in Package Cache

## Other code changes

* Fix case typo on Consent.provision in R4
* Fix R3 Quantity.copyValues()
* Remove debugging code
* Add more debugging to validation failure
* Add support for active only to VSAC importer
* Add r4b support to Package Version Generation
* Fix argument confusion in format in time validation
* Added support for tracking whether elements are ellipsed and for rendering accordingly
***NO_CI***
2024-09-22 17:51:33 +00:00
Grahame Grieve c143f7adff bug fix on snapshot generation after testing 2024-09-22 11:24:30 -04:00
Lloyd McKenzie eba23cba20 Reverted out QuestionnaireScript changes 2024-09-22 11:10:46 -04:00
Grahame Grieve 6314ad61bb
Merge pull request #1729 from hapifhir/EllipseSupport
Added support for tracking whether elements are ellipsed and for rend…
2024-09-22 08:51:39 -04:00
Grahame Grieve 5466595215 Work around problem with language value set being marked experimental 2024-09-22 06:41:38 -04:00
Grahame Grieve fedf7e9e6d Add more debugging to validation failure 2024-09-22 06:39:28 -04:00
oliveregger 2f165863e7 fix test, revert var patch 2024-09-21 18:50:01 +02:00
Grahame Grieve 8cfcbf389e Fix various issues rendering and validating additional bindings with usage contexts 2024-09-21 00:35:01 -04:00
oliveregger d69a8e3e43 FHIR-46548: where clause on alias #1748 2024-09-18 23:09:24 +02:00
markiantorno f3bd5b9be8 Updating version to: 6.3.27-SNAPSHOT and incrementing test cases dependency. 2024-09-17 22:00:24 +00:00
markiantorno 46affee48f Release: v6.3.26
## Validator Changes

* Validate of experimental property on bindings
* Add -no-experimental-content flag
* Allow JSON named extensions to be structure types other than logical
* Process relative URLs properly in base when generating snapshots

## Other code changes

* Fix rendering path for value set references for kindling
* refactor error handling in ProfileUtilities
* Fix for NPE processing packages
***NO_CI***
2024-09-17 21:09:53 +00:00
Lloyd McKenzie 4810ed3e0e Additional fixes 2024-09-17 14:48:37 -06:00
Grahame Grieve fbfd81532d Merge remote-tracking branch 'origin/master' 2024-09-17 16:18:15 +08:00
Grahame Grieve 0d8c5942e7 Fix rendering path for value set references for kindling 2024-09-17 14:11:13 +08:00
Grahame Grieve 9dae4118ae refactor error handling in ProfileUtilities 2024-09-14 08:26:07 +08:00
Grahame Grieve bfed8a15d5
Merge pull request #1744 from hapifhir/2024-09-gg-logical-json
2024 09 gg logical json
2024-09-12 14:07:06 +08:00
Grahame Grieve 07f1981a8c Fix for NPE processing packages 2024-09-12 11:56:04 +08:00
Grahame Grieve 8056dced3e Allow JSON named extensions to be structure types other than logical 2024-09-12 11:55:24 +08:00
Grahame Grieve 337aaf80cf Process relative URLs properly in base when generating snapshots 2024-09-12 11:54:40 +08:00
markiantorno 4af3deff26 Updating version to: 6.3.26-SNAPSHOT and incrementing test cases dependency. 2024-09-11 18:28:22 +00:00
markiantorno f09bc48f7d Release: v6.3.25
## Validator Changes

* no changes

## Other code changes

* Fix logic for cache clearing on package cache initialization
***NO_CI***
2024-09-11 17:40:08 +00:00
Lloyd McKenzie 729c2da4c0 Fixed elide spelling 2024-09-10 08:23:26 -06:00
Lloyd McKenzie fff805e5b7 Made changes as recommended by Grahame and Elliot 2024-09-10 08:07:01 -06:00
Lloyd McKenzie db718631eb Merge and updates 2024-09-09 20:55:03 -06:00
markiantorno 2c8122a42e Updating version to: 6.3.25-SNAPSHOT and incrementing test cases dependency. 2024-09-09 19:09:24 +00:00
markiantorno 813f8200a2 Release: v6.3.24
## Validator Changes

* Fix expression for con-3 properly (fix validation problem on some condition resources)
* Fix FHIRPath bug using wrong type on simple elements when checking FHIRPath types
* FHIRPath: Allow _ in constant names (per FHIRPath spec)
* Fix value set rendering creating wrong references
* Fix bug processing value set includes / excludes that are just value sets (no system value)
* Alter processing of unknown code systems per discussion at ,https://chat.fhir.org/#narrow/stream/179252-IG-creation/topic/Don't.20error.20when.20you.20can't.20find.20code.20system and implement unknown-codesystems-cause-errors
* Improve message for when elements are out of order in profile differentials

## Other code changes

* fix problem where profile rendering had spurious 'slices for' nodes everywhere
* Update SQL-On-FHIR implementation for latest cases, and clone test cases to general test care repository
* Fix problem generating value set spreadsheets
* fix concurrent modification error processing language translations
* Check for null fetcher processing ConceptMaps (#1728)
***NO_CI***
2024-09-09 18:23:37 +00:00
Grahame Grieve ffe0ab6414
2024 09 gg vs sql (#1738)
* Fix bug processing value set includes / excludes that are just value sets (no system value)

* fix value set rendering creating wrong references

* Update SQL-On-FHIR implementation for latest cases, and clone test cases to general test care repository

* Fix expression for con-3 properly (fix validation problem on some condition resources)

* FHIRPath: Allow _ in constant names (per FHIRPath spec)

* Fix FHIRPath bug using wrong type on simple elements when checking FHIRPath types

* release notes

* fix sql-on-fhir tests

---------

Co-authored-by: Grahame Grieve <grahameg@gmail.ccom>
2024-09-09 12:27:08 -04:00
Grahame Grieve 9f9e9dfb8a Merge branch 'master' of https://github.com/hapifhir/org.hl7.fhir.core 2024-09-06 22:18:06 +08:00
Grahame Grieve 7fc34e509a alter processing of unknown code systems per discussion at ,https://chat.fhir.org/#narrow/stream/179252-IG-creation/topic/Don't.20error.20when.20you.20can't.20find.20code.20system and implement unknown-codesystems-cause-errors 2024-09-06 22:18:01 +08:00
Grahame Grieve 6165b154e1
Merge branch 'master' into test_language_concurrency_bug 2024-09-05 04:29:58 +08:00
Grahame Grieve 4603b3ac3c compile fix 2024-09-04 23:25:28 +08:00
Grahame Grieve 515bead90d compile fix 2024-09-04 21:59:01 +08:00
Gjergj Sheldija 51ad87c715 PR comment 2024-09-04 08:16:03 +02:00
Gjergj Sheldija 973ab9e56f possible fix 2024-09-03 15:41:58 +02:00
Grahame Grieve 63ab904401 fix problem where profile rendering had spurious 'slices for' nodes everywhere 2024-09-03 21:27:28 +08:00
Grahame Grieve 7e5014c6d7 Fix problem generating value set spreadsheets 2024-09-03 21:26:53 +08:00
Grahame Grieve 83daa93fbc fix concurrent modification error processing language translations 2024-09-03 21:26:35 +08:00
Grahame Grieve 00f4f0998f Improve message for when elements are out of order 2024-09-03 21:26:17 +08:00
Gjergj Sheldija 8e908da1ab unit tests to check the concurrency bug 2024-09-03 13:50:54 +02:00
Lloyd McKenzie 975653e07d Added support for tracking whether elements are ellipsed and for rendering XHTML versions of XML and JSON content with ellipsed elements 2024-08-29 21:17:20 -06:00
markiantorno 19c8b17575 Updating version to: 6.3.24-SNAPSHOT and incrementing test cases dependency. 2024-08-28 18:45:30 +00:00
markiantorno 2721ebb8c6 Release: v6.3.23
## Validator Changes

* no changes

## Other code changes

* Set fhir-test-cases to release 1.5.20
***NO_CI***
2024-08-28 17:59:21 +00:00
markiantorno 1e5cb4da49 Updating version to: 6.3.23-SNAPSHOT and incrementing test cases dependency. 2024-08-27 21:23:55 +00:00
markiantorno 0bdba83faf Release: v6.3.22
## Validator Changes

* no changes

## Other code changes

* BugFix: Restore loadFromFolder method in FilesystemPackageCacheManager
***NO_CI***
2024-08-27 20:30:39 +00:00
markiantorno c172df802d Updating version to: 6.3.22-SNAPSHOT and incrementing test cases dependency. 2024-08-27 17:54:17 +00:00
markiantorno c92ee550c0 Release: v6.3.21
## Validator Changes

* Security Fix: Move all instantiation of transformerFactory to XMLUtils and set ACCESS_EXTERNAL flags automatically (slightly improvement to output message, but closes possible attack vector)
* Handle 308 redirects when fetching packages
* Fix NPE in ValueSetValidator
* Fix for NPE in IGLoader
* fix version conversion problem for ConceptMap (4<->5): relationship comment getting lost for noMap entries
* Add check for multiple WG extensions (HL7 context)

## Other code changes

* Suppress spurious logging statement
* Add Australian CDA name prefix & uri to mapping transform code
* Add new messages for tx.fhir.org
* Remove narrative from snapshot tests
* Improve complex extension rendering when rendering by profile
* Rewrite processing of map statements when generating snapshots to fix known bugs
* Updates to Capability Statement rendering (and minor Operation Definition rendering improvement)
* Fix wrong reference to CDA classes for unscoped class names
* fix rendering issue for R4 relationship codes in ConceptMap
* rework decimal lowBoundary() and highBoundary() after discussion on Zulip, and add extensive testing
* Fix existing test case for fixed up boundary handling in FHIRPath
* Add CodeSystem fetching for selected code systems for VSAC import
* Drop to saxon 11.6 for now
* fix issue with json unicode whitespace enscaping
* get Java generator running again (though no code regenerated)
* don't escape unicode whitespace in json files
* Fix NPE in questionnaire renderer
* Hack workaround for R4 issue with ProcessPriority
* Rewrite concurrency management for file system package cache
***NO_CI***
2024-08-27 16:42:13 +00:00
Grahame Grieve edd5b7a560
Merge pull request #1717 from hapifhir/do-20240816-xslt-external
Move all instantiation of transformerFactory to XMLUtils and set ACCESS_EXTERNAL flags automatically
2024-08-27 08:00:51 +08:00
Grahame Grieve 9aef2793ce
Merge pull request #1719 from robeastwood-agency/202408-re-cda-au-namespace
Add Australian CDA name prefix & uri
2024-08-27 07:59:36 +08:00
Grahame Grieve be52ad2e96
Merge pull request #1721 from hapifhir/2024-08-gg-misc
2024 08 gg misc
2024-08-27 07:58:48 +08:00
Grahame Grieve 6de8821dce compile fix 2024-08-23 21:52:10 +08:00
Grahame Grieve 1b84fcd5af remove narrative from snapshot tests 2024-08-23 21:51:04 +08:00
Grahame Grieve af75c51fea Improve complex extension rendering when rendering by profile 2024-08-23 21:50:53 +08:00
Grahame Grieve 636dbf14d4 rewrite processing of map statements when generating snapshots to fix known bugs 2024-08-23 21:50:25 +08:00
Grahame Grieve 14758663cf Fix wrong reference to CDA classes for unscoped class names 2024-08-22 08:07:28 +08:00
Grahame Grieve d05a30eeca fix rendering issue for R4 relationship codes 2024-08-19 07:09:17 +08:00
Grahame Grieve 00ad185882 rework decimal lowBoundary() and highBoundary() after discussion on Zulip, and add extensive testing 2024-08-19 07:08:59 +08:00
Rob Eastwood 326e1284eb
Add Australian CDA name prefix & uri
Fixes #1613
2024-08-18 08:44:28 +10:00
Vassil Peytchev c60b2bfe1d fixes on capability statement rendering 2024-08-16 16:53:51 -05:00
Vassil Peytchev eb1b18c853 Merge branch 'master' of github.com:vassilpeytchev/org.hl7.fhir.core into cs-changes 2024-08-16 14:05:20 -05:00
Vassil Peytchev 7dac6306a7
Merge branch 'hapifhir:master' into master 2024-08-16 13:53:35 -05:00
dotasek 60470b1a28 Move all instantiation of transformerFactory to XMLUtils
and set ACCESS_EXTERNAL flags automatically
2024-08-16 10:34:50 -04:00
Grahame Grieve c9bb2b4e55 Fix NPE in questionnaire renderer 2024-08-16 06:46:52 +08:00
Grahame Grieve 5bbb21aad5 Add check for multiple WG extensions 2024-08-16 06:46:41 +08:00
Grahame Grieve 6e5d5cdf40 Hack workaround for R4 issue with ProcessPriority 2024-08-16 06:46:15 +08:00
Vassil Peytchev 2bc9bf9a60 Merge branch 'master' of github.com:vassilpeytchev/org.hl7.fhir.core into cs-changes 2024-08-15 14:33:26 -05:00
Vassil Peytchev 07fe018e75 Update version 2024-08-15 14:32:53 -05:00
Vassil Peytchev c26ca1f427
Merge branch 'hapifhir:master' into master 2024-08-15 13:58:34 -05:00
markiantorno fe2a8e6d11 Updating version to: 6.3.21-SNAPSHOT and incrementing test cases dependency. 2024-08-13 17:31:22 +00:00
markiantorno 1800948c7a Release: v6.3.20
## Validator Changes

* Improved handling of display validation for various languages
* fix xml:space message after discussion on Zulip

## Other code changes

* ValueSet rendering improvements
* Add isUnknownLocalReferencesNotLinks to RenderingContext
* Fix up conceptMap rendering (remove spurious summary table)
* Add R6 ballot 2 to FHIRVersion enum in R5
* rendering fixes for implementers
* improve rendering of bindings with no value sets
***NO_CI***
2024-08-13 16:46:00 +00:00
Grahame Grieve d4097d3dc7 ValueSet rendering improvements 2024-08-13 07:02:52 +08:00
Grahame Grieve f4f978941d add isUnknownLocalReferencesNotLinks to RenderingContext 2024-08-12 05:59:10 +08:00
Grahame Grieve 0114837ede compile fix 2024-08-12 05:32:58 +08:00
Grahame Grieve d11cbded2b improved handling of display validation for various languages 2024-08-11 22:49:51 +08:00
Grahame Grieve 3f34fc1d91 Fix up conceptMap rendering (remove spurious summary table) 2024-08-11 22:30:34 +08:00
Grahame Grieve bf105ae179 Add R6 ballot 2 2024-08-11 22:30:14 +08:00
Grahame Grieve dc6d4fc912 rendering fixes for implementers 2024-08-09 07:52:15 +08:00
Vassil Peytchev 448edf45b0 Merge branch 'master' into cs-changes 2024-08-08 11:52:32 -05:00
Vassil Peytchev f432416ac8 minor cleanup 2024-08-08 11:50:49 -05:00
Vassil Peytchev a5d2e7787d
Merge branch 'hapifhir:master' into master 2024-08-08 10:56:11 -05:00
Grahame Grieve 255a225e51
Merge pull request #1710 from hapifhir/2024-08-gg-no-binding-vs
2024 08 gg no binding vs
2024-08-08 09:16:06 +08:00
Grahame Grieve 4743a0468a improve rendering of bindings with no value sets 2024-08-08 07:41:06 +08:00
Vassil Peytchev 739e0fdbbf Getting Cory's changes 2024-08-06 15:52:34 -05:00
dotasek eba6868afe Merge remote-tracking branch 'origin/master' into do-20240716-fix-code-validation-for-locale 2024-08-05 10:32:51 -04:00
Vassil Peytchev 77eeeac076
Merge branch 'hapifhir:master' into master 2024-08-04 10:57:17 -05:00
markiantorno e6e4efa540 Updating version to: 6.3.20-SNAPSHOT and incrementing test cases dependency. 2024-08-04 15:24:42 +00:00
markiantorno aac96cf897 Release: v6.3.19
## Validator Changes

* Improve performance of supplement processing
* Add support for validating xml:space
* Fix NPE validating maps
* Fix duplicate removal code that caused missed WARNING messages (#1698)
* Fix interaction between terminology cache and validation location  (#1700)
* Better concept map validation
* Improved base64 parsing error
* Add support for unknown code system version validating concept maps
* Fix bug using wrong profile when profiling recursive properties

## Other code changes

* Return null for all toCode enum params that are null
* fix bugs adding publishing WG in element mode
* Fix equality method that caused missed WARNING messages
* fix rendering issues
  * rendering fixes for R6 build
  * don't throw error for wrong rendering mode
  * Document rendering fixes - subject and section
  * more work on forcing valid html generation
  * more hyperlink validation improvements
  * further fixes to link validation
  * fix list inside paragraph
  * fix actor capabilities in wrong place
  * Support missing datatypes
  * Fill out missing anchors
  * Fix wrong handling of contained resources)
  * #1678 - add div to children when exploring Narrative
***NO_CI***
2024-08-04 14:35:44 +00:00
Grahame Grieve 8790780feb fix npe 2024-08-04 10:39:23 +08:00
Grahame Grieve e73447939b improve performance of supplement processing 2024-08-04 10:00:01 +08:00
Grahame Grieve 7fda67ca7e fix rendering issues 2024-08-03 23:46:31 +08:00
Grahame Grieve af5eaafd34 Merge branch 'master' of https://github.com/hapifhir/org.hl7.fhir.core 2024-08-03 23:38:47 +08:00
Grahame Grieve 2f1f59d5f9 rendering fixes for R6 build 2024-08-03 19:32:46 +08:00
Grahame Grieve b248eb7d67 Add support for validating xml:space 2024-08-03 19:31:55 +08:00
Grahame Grieve 7670422a6c don't throw error for wrong rendering mode 2024-08-03 19:31:35 +08:00
Grahame Grieve eecd04924b fix bugs adding publishing WG in element mode 2024-08-03 19:30:54 +08:00
caspears 2d5049c938 CapabilityStatement Message and Document rendering 2024-08-01 23:05:49 -07:00
caspears 4281b0fa48 Render resource profile and supportedProfile title when available 2024-08-01 22:23:29 -07:00
Vassil Peytchev 0ce8a38650 Merge branch 'master' of github.com:hapifhir/org.hl7.fhir.core 2024-08-01 15:09:06 -05:00
Vassil Peytchev f5a9e2b242 Updating to the current version 2024-08-01 14:13:02 -05:00
dotasek c757c6982d Move defensive copy directly to TerminologyCache 2024-07-31 18:19:33 -04:00
Grahame Grieve 2ebcf267ec Document rendering fixes - subject and section 2024-07-30 15:43:32 +08:00
dotasek f30150ff4b
Fix interaction between terminology cache and validation location (#1700)
* DO NOT MERGE TO MASTER

Contains replication for validation location issue

* Don't let the validator mutate a cached result

* Revert filtering of ValidationTests

* WIP start ValidationResult equality implementation

* Move BaseWorkerContext testing to BaseWorkerContextTests

* A little more cleanup

* Code cleanup, and check that cached ValidationResult is a copy

* Complete ValidationResult equals method.
2024-07-29 10:12:55 -04:00
Grahame Grieve c99b7ee53a Improved base64 parsing error 2024-07-28 20:04:28 +08:00
Grahame Grieve 71e8a8294a more work on forcing valid html generation 2024-07-28 20:04:18 +08:00
Grahame Grieve f9ed8dc348 Add support for unknown code system version validating concept maps 2024-07-28 20:03:44 +08:00
Grahame Grieve f0531e9d66 fix bug using wrong profile when profiling recursive properties 2024-07-28 20:02:25 +08:00
Grahame Grieve 714b0a0fd4 Merge branch 'master' of https://github.com/hapifhir/org.hl7.fhir.core 2024-07-25 17:30:17 +08:00
Grahame Grieve 7ba860c4ed fix rendering issues (list inside paragraph, actor capabilities in wrong place, missing datatypes, missing anchors, wrong handling of contained resources) 2024-07-25 17:00:42 +08:00
dotasek 33cb80dfe7 Return null for all toCode enum params that are Enum.NULL (r5) 2024-07-19 12:19:15 -04:00
Grahame Grieve 549d76fdc4 Merge branch 'master' of https://github.com/hapifhir/org.hl7.fhir.core 2024-07-18 21:15:52 +08:00
Grahame Grieve 652bec9743 #1678 - add div to children when exploring Narrative 2024-07-18 20:23:50 +08:00
markiantorno 0b10290f0f Updating version to: 6.3.19-SNAPSHOT and incrementing test cases dependency. 2024-07-17 06:14:05 +00:00
markiantorno 5c3953cfdb Release: v6.3.18
## Validator Changes

* No Changes

## Other code changes

* Naming System fix for THO
* Fix issue with rendering OperationOutcomes that don't have 'detail'
* Fix problem with value set anchor generation when rendering
***NO_CI***
2024-07-17 05:22:26 +00:00
Grahame Grieve 7328ad63b9 Merge branch 'master' of https://github.com/hapifhir/org.hl7.fhir.core 2024-07-17 14:15:54 +09:30
Grahame Grieve fc517e3ec5
Merge pull request #1690 from hapifhir/2024-07-gg-tho-ns-fix
2024 07 gg tho ns fix
2024-07-17 12:45:35 +08:00
Grahame Grieve 980f88ea49 fix problem with value set anchor generation when rendering 2024-07-17 13:27:51 +09:30
Grahame Grieve dc750bb211
Merge pull request #1691 from hapifhir/FixOperationOutcomeRendering
Fix issue with rendering OperationOutcomes that don't have 'detail'
2024-07-17 11:51:16 +08:00
Grahame Grieve 6d119f2132
Merge branch 'master' into 2024-07-gg-tho-ns-fix 2024-07-17 11:50:20 +08:00
Lloyd McKenzie 84fc25efa3 Fix issue with rendering OperationOutcomes that don't have 'detail' 2024-07-16 21:35:41 -06:00
Grahame Grieve 128f3733e2 Naming System fix for THO 2024-07-17 06:26:05 +08:00
markiantorno 0722d728ae Updating version to: 6.3.18-SNAPSHOT and incrementing test cases dependency. 2024-07-16 18:20:14 +00:00
markiantorno cf2b25eb29 Release: v6.3.17
## Validator Changes

* work around THO 6.0.0 problem (hack, to be reversed later)
* Improve MeasureReport validation for checking subject count
* Fix for R2B Resource.id cardinality problem
* Fix for validator using wrong property for list determination when parsing json

## Other code changes

* no changes
***NO_CI***
2024-07-16 17:32:26 +00:00
Grahame Grieve 9272b6eff3
2024 07 gg measure validation (#1687)
* Fix for validator using wrong property for list determination when parsing json

* Fix for R2B Resource.id cardinality problem

* Improve MeasureReport validation for checking subject count

* work around THO 6.0.0 problem (hack, to be reversed later)

* release notes

---------

Co-authored-by: Grahame Grieve <grahameg@gmail.ccom>
2024-07-16 11:43:36 -04:00
Grahame Grieve f5af20acad work around THO 6.0.0 problem (hack, to be reversed later) 2024-07-16 21:47:03 +08:00
Grahame Grieve 14652e6e25 Merge branch 'master' of https://github.com/hapifhir/org.hl7.fhir.core 2024-07-16 19:27:11 +08:00
Grahame Grieve 37006946cd Fix for R2B Resource.id cardinality problem 2024-07-16 06:15:57 +08:00
Grahame Grieve 2a37fb9351 Fix for validator using wrong property for list determination when parsing json 2024-07-16 06:15:32 +08:00
markiantorno a09c712c87 Updating version to: 6.3.17-SNAPSHOT and incrementing test cases dependency. 2024-07-12 12:35:11 +00:00
markiantorno 26c6878c76 Release: v6.3.16
## Validator Changes

* Add clearer message for errors around unable to validate because unknown code system
* Fix problem with fhirVersion cardinality validating IG resources

## WHO I18n Project

* Remove Questionnaire.item.linkId from translatable content

## Other code changes

* Further revisions to rendering framework for id uniqueness, main spec rendering, and various reported issues
* Improve doco for R4/R4B renderers
* Introduce backwards compatible constructor in ValidationEngineBuilder and fix useEcosystem
* Use v2 of PublishCodeCoverageResults (#1665)
* #1583 do not serialize choice group + add testcase
***NO_CI***
2024-07-12 11:48:05 +00:00
Grahame Grieve a2e6b001b3 more work on transifex support 2024-07-12 05:11:43 +08:00
Grahame Grieve d8f7b98573 further revisions to rendering framework for id uniqueness, main spec rendering, and various reported issues 2024-07-12 05:09:21 +08:00
Grahame Grieve dd02db3aae remove Questionnaire.item.linkId from translatable content 2024-07-12 05:07:03 +08:00
oliveregger ca7a2ba4e4 add testcase for #1583 2024-07-08 23:20:32 +02:00
oliveregger 66e35e1af6 #1583 do not serialize choice group 2024-07-08 23:11:30 +02:00
markiantorno 115074ee60 Updating version to: 6.3.16-SNAPSHOT and incrementing test cases dependency. 2024-07-05 12:51:24 +00:00
markiantorno 409b0df34d Release: v6.3.15
## Validator Changes

* no changes

## Other code changes

* Fix broken link to definitions in profiles
***NO_CI***
2024-07-05 12:03:07 +00:00
Grahame Grieve ea141b1ba9 fix bug producing broken links 2024-07-05 17:42:05 +08:00
markiantorno 59d0334e0e Updating version to: 6.3.15-SNAPSHOT and incrementing test cases dependency. 2024-07-04 03:22:56 +00:00
markiantorno 50ce6bb6ac Release: v6.3.14
## Validator Changes

* Add support for ND-JSON. Note that the validator is not expected to perform well on large ND-JSON files (or any other file type)
* Significant change: the validator was not checking for the end of the input when parsing a JSON resource finished. It will now start giving errors when JSON continues once the object is complete
* Add support for the create object syntax in FML when validating FML
* Improved error message when supplement url used instead of code system URL

## WHO Translation Project

* Add complete dutch translations (Thanks Alexander Henket)

## Other code changes

* Fix various rendering problems leading to non-unique html anchors
* Fix for unrendered data types
***NO_CI***
2024-07-04 02:33:38 +00:00
Grahame Grieve 4a729529e8
Merge pull request #1668 from ahdis/oe_fp_1655
date adaption for dateOp #1655
2024-07-04 04:00:32 +08:00
Grahame Grieve 62bf3e1bc0 Merge branch 'master' of https://github.com/hapifhir/org.hl7.fhir.core 2024-07-02 06:44:39 +09:30
Grahame Grieve 8ba3d0e3c5 improved error message when supplement url used instead of code system URL 2024-07-01 06:29:09 +09:30
Grahame Grieve a209c13c1a Add support for NDJSON format, and fix bug where JSON parser was not checking for the end of content 2024-07-01 06:28:36 +09:30
Grahame Grieve 437687f5cd fix various rendering problems leading to non-unique html anchors 2024-07-01 06:27:51 +09:30
Grahame Grieve 8690c77d2b
Merge branch 'master' into 2024-06-gg-render-bug-2 2024-06-28 19:53:28 +10:00
Grahame Grieve 185427a975 fix for unrendered data types 2024-06-28 18:15:49 +10:00
markiantorno 70ed025741 Updating version to: 6.3.14-SNAPSHOT and incrementing test cases dependency. 2024-06-28 01:14:27 +00:00
markiantorno b3628c7ccd Release: v6.3.13
## Validator Changes

* no changes

## Other code changes

* Rendering fixes
***NO_CI***
2024-06-28 00:27:59 +00:00
Grahame Grieve 6a66f37898
fix rendering bugs (#1671)
* fix rendering bugs

* release notes

---------

Co-authored-by: Grahame Grieve <grahameg@gmail.ccom>
2024-06-27 19:06:42 -04:00
Grahame Grieve 8bf07711f1 fix rendering bugs 2024-06-28 08:06:25 +10:00
oliveregger ea103178ea fix missing quote 2024-06-27 11:25:06 +02:00
Oliver Egger b7f81ccb55
Merge branch 'master' into oe_fp_1655 2024-06-27 11:11:34 +02:00
markiantorno 0736de9c2d Updating version to: 6.3.13-SNAPSHOT and incrementing test cases dependency. 2024-06-27 00:47:09 +00:00
markiantorno f14f2a42ad Release: v6.3.12
## Validator Changes

* Change how count is calculated when expanding value sets
* Fix value set expansion bugs
* Fix for fhirpath issue on command line (#1650)
* Add IG dependency validator
* work around bad r4 extension definitions
* don't reload different sub-version of extensions pack

## Other code changes

* Rework rendering library from ground up
  * Merge Fix: Fix split logic of canonical into url and version in several places (#1663)
  * Suppress spurious message when code system is unknown
  * don't raise needless and wrong exceptions about extension definitions when rendering
  * fix duplicate link creation
  * Stop recursive rendering crash
  * Obligation rendering improvements
* Handle extra profiles on resources in an IG when converting between versions
* Fixed issue with actor title not rendering in obligations
* Test and adaption for dateOp #1655
* Use assertj instead of hamcrest (#1662)
* More transifex work
* Add support for local packages during testing
***NO_CI***
2024-06-27 00:00:09 +00:00
Grahame Grieve 9d0d095aa3 fix for dateOp 2024-06-27 08:08:13 +10:00
Grahame Grieve d0be81d99c compile fix 2024-06-27 07:25:52 +10:00
Grahame Grieve 749b073de1 Obligation rendering improvements 2024-06-27 07:03:54 +10:00
Grahame Grieve d441fa58aa release notes + render attachments 2024-06-27 06:25:01 +10:00
Grahame Grieve 94937c9d30 Stop recursive rendering crash 2024-06-26 19:32:40 +10:00
Grahame Grieve b5539db606 try fixing narrative generation tests 2024-06-26 18:09:46 +10:00
Grahame Grieve eb0c4d8d93 fix date operations problem 2024-06-26 07:19:47 +10:00
dotasek c222582b22 Fix FHIRPath Date opPlus/Minus failures 2024-06-25 16:24:35 -04:00
oliveregger b70062f326 date adaption for dateOp #1655 2024-06-25 20:46:07 +02:00
dotasek b5cb29cc1b Remove DebugUtilities references 2024-06-25 12:30:46 -04:00
Grahame Grieve 36de9ff5fa
Merge pull request #1652 from hapifhir/FixObligationActorRendering
Fixed issue with actor title not rendering
2024-06-25 23:15:15 +10:00
Grahame Grieve 6830785c47
Merge pull request #1656 from ahdis/oe_fp_1655
Test and adaption for dateOp #1655
2024-06-25 23:14:02 +10:00
Grahame Grieve 9208f4848f
Merge pull request #1657 from hapifhir/2024-06-gg-vs-fixes
2024 06 gg vs fixes
2024-06-25 23:13:44 +10:00
Grahame Grieve 170bcf19e6 reconcile rendering changes 2024-06-25 21:22:33 +10:00
Grahame Grieve 88e900110f Merge remote-tracking branch 'origin/master' into 2024-06-gg-rewrite-rendering 2024-06-25 19:53:04 +10:00
Grahame Grieve df82203b3d rework rendering library from ground up 2024-06-25 19:40:57 +10:00
Grahame Grieve d23052f329 changes after testing complete 2024-06-20 09:57:25 +10:00
dotasek c631f6c808
Merge Fix: Fix split logic of canonical into url and version in several places (#1663)
* Fix split logic of canonical into url and version in several places

Removed
- org.hl7.fhir.r4b.renderers.DataRenderer#versionFromCanonical
- org.hl7.fhir.r4b.renderers.DataRenderer#systemFromCanonical
- org.hl7.fhir.r5.renderers.DataRenderer#versionFromCanonical
- org.hl7.fhir.r5.renderers.DataRenderer#systemFromCanonical

The logic of these methods is wrong, the functionality of extracting
the version and the system URL have been swapped.

Therefore, all usages of aforementioned methods were replaced by the
use of org.hl7.fhir.utilities.CanonicalPair. This not only fixes the
problem, but also reduces duplicated functionality.

* Remove dead code from merge

* Fix spacing issues in rendering

* Empty commit, make-pipeline-go

---------

Co-authored-by: Max Bureck <max.bureck@fokus.fraunhofer.de>
2024-06-19 19:34:24 -04:00
Grahame Grieve 2612fa1e63 Change how count is calculated when expanding value sets 2024-06-18 19:44:22 +10:00
Grahame Grieve 31a7793c49 testing fixes 2024-06-18 17:16:44 +10:00
oliveregger a63792d2b2 Test and adaption for dateOp #1655 2024-06-18 00:03:23 +02:00
Grahame Grieve e91d8152b2 All compiles for the first time 2024-06-17 22:53:29 +10:00
Grahame Grieve b1a3141214 more WIP on rendering refactor 2024-06-17 22:40:52 +10:00
Grahame Grieve ef2531367e more WIP 2024-06-15 23:45:56 +10:00
Grahame Grieve e4abcd1be3 fix value set expansion bugs 2024-06-14 21:56:23 +10:00
Grahame Grieve 2f5ef0b216 more WIP on rendering rewrite 2024-06-14 17:15:56 +10:00
Lloyd McKenzie 6a4e2e7b9d Fixed issue with actor title not rendering 2024-06-13 19:44:43 -05:00
Grahame Grieve a9f0b70e30 work around bad r4 extension definitions 2024-06-13 12:13:32 +10:00
Grahame Grieve 2f2c7be2ed don't raise needless and wrong exceptions about extension definitions when rendering 2024-06-13 12:12:42 +10:00
Grahame Grieve ebedced511 don't reload different sub-version of extensions pack 2024-06-13 12:12:13 +10:00
Grahame Grieve 506dad8752 WIP: rewrite of rendering framework 2024-06-13 07:38:22 +10:00
Grahame Grieve f43dcd904f fix duplicate link creation 2024-06-13 07:36:29 +10:00
Grahame Grieve 4a73b746bd update ResourceElement + tests 2024-06-11 21:35:11 +10:00
Grahame Grieve 093758429a First draft of ResourceElement - rewrite rendering layer 2024-06-09 18:17:51 +10:00
Vassil Peytchev 376d5f26fa
Merge branch 'hapifhir:master' into master 2024-06-07 14:06:50 -05:00
markiantorno 03ea625a7c Updating version to: 6.3.12-SNAPSHOT and incrementing test cases dependency. 2024-06-07 03:25:47 +00:00
markiantorno 6ba8b38fc5 Release: v6.3.11
## Validator Changes

* Find value sets on tx server if not tx.fhir.org
* Do not send Content-Type header with GET requests for tx servers
* Fix npe validating code system
* Support discriminator by position
* Don't check type characteristics for unknown types

## WHO I18n Project

* Fix typos in phrases, and fix up handling of apostrophes in messages without parameters
* Test and fix for single quote escapes in I18n
* Create and test transifex configuration

## Rendering Changes

* Fix contact rendering to work properly
* Fix issue resolving contained resource rendering DiagnosticReports etc
* Handle case where Contact.value has extensions instead of a string value
* Render Parameterised types
* Fix bug with LOINC Code row showing wrongly in Profile Details view
* Partial implementation of type parameters
* Fixed rendering of actor-specific obligations, added elementIds to obligation narrative rendering
* Corrected ObligationsRenderer to handle multiple actors and multiple codes.  Also got obligations with elements to render properly (which means knowing whether you're on a table page or definitions page, what tab you're on, and whether the element for the obligation is in-scope for that tab (so you know whether to hyperlink or not).  Had to make links on the tables point to definitions because table anchors are not unique.

## Other code changes

* split out Base.canHavePrimitiveValue() from Base.hasPrimitiveValue()
* Refactor how observation profiles are registered in order to generalise management of extra profiles
  * Use validation policy to implement Observation profile rules
  * Rework validation policy management in standalone validator
* Try deploying javadoc with SNAPSHOT
* Add utility to unpack the spec.internals file
* v2 in FHIR tests
* Fix bug loading language pack NPMs
***NO_CI***
2024-06-07 02:33:16 +00:00
dotasek 93037baa9b Go back to SNAPSHOT
***NO_CI***
2024-06-06 21:58:57 -04:00
markiantorno d36d030076 Release: v6.3.11
## Validator Changes

* Find value sets on tx server if not tx.fhir.org
* Do not send Content-Type header with GET requests for tx servers
* Fix npe validating code system
* Support discriminator by position
* Don't check type characteristics for unknown types

## WHO I18n Project

* Fix typos in phrases, and fix up handling of apostrophes in messages without parameters
* Test and fix for single quote escapes in I18n
* Create and test transifex configuration

## Rendering Changes

* Fix contact rendering to work properly
* Fix issue resolving contained resource rendering DiagnosticReports etc
* Handle case where Contact.value has extensions instead of a string value
* Render Parameterised types
* Fix bug with LOINC Code row showing wrongly in Profile Details view
* Partial implementation of type parameters
* Fixed rendering of actor-specific obligations, added elementIds to obligation narrative rendering
* Corrected ObligationsRenderer to handle multiple actors and multiple codes.  Also got obligations with elements to render properly (which means knowing whether you're on a table page or definitions page, what tab you're on, and whether the element for the obligation is in-scope for that tab (so you know whether to hyperlink or not).  Had to make links on the tables point to definitions because table anchors are not unique.

## Other code changes

* split out Base.canHavePrimitiveValue() from Base.hasPrimitiveValue()
* Refactor how observation profiles are registered in order to generalise management of extra profiles
  * Use validation policy to implement Observation profile rules
  * Rework validation policy management in standalone validator
* Try deploying javadoc with SNAPSHOT
* Add utility to unpack the spec.internals file
* v2 in FHIR tests
* Fix bug loading language pack NPMs
***NO_CI***
2024-06-06 22:46:44 +00:00
Lloyd McKenzie ca97ce2aaa Merge branch 'master' of https://github.com/hapifhir/org.hl7.fhir.core into FixObligationRendering 2024-06-06 09:05:44 -06:00
Grahame Grieve 765b4da292 find value sets on tx server if not tx.fhir.org 2024-06-06 19:41:18 +10:00
Grahame Grieve f4cc60c0e6 split out canHavePrimitiveValue() and hasPrimitiveValue() 2024-06-06 09:09:58 +10:00
Vassil Peytchev 36f7236aad First part fixes to CP rendering 2024-06-04 12:33:44 -05:00
Vassil Peytchev 0959c14c2b merge master 2024-06-03 08:22:44 -05:00
Vassil Peytchev 974ce280aa adding system-level operations 2024-06-03 08:20:16 -05:00
Grahame Grieve 95ec2b00a4 add java doc 2024-06-02 21:18:58 +10:00
Grahame Grieve c4585c995f proposed fix for hasPrimitiveValue() 2024-06-02 21:11:21 +10:00
Grahame Grieve 1e940dc489 fix contact rendering to work properly 2024-06-01 23:43:28 +10:00
Grahame Grieve 7512347c40 fix issue resolving contained resource 2024-06-01 23:39:49 +10:00
Grahame Grieve 674f834f8d Handle case where Contact.value has extensions instead of a string value 2024-06-01 22:57:13 +10:00
Grahame Grieve e51534030e Render Parameterised types, and fix bug with LOINC Code row showing wrongly in Profile Details view 2024-06-01 22:56:42 +10:00
Grahame Grieve 398b46e32d Do not send Content-Type header with GET requests 2024-06-01 22:55:35 +10:00
Grahame Grieve 2f38cb544c Refactor how observation profiles are registered in order to generalise management of extra profiles 2024-06-01 22:54:17 +10:00
Grahame Grieve 04e95f4e05 Partial implementation of type parameters 2024-06-01 22:51:55 +10:00
Grahame Grieve df711c0762 try again 2024-05-31 09:59:00 +10:00
Grahame Grieve 3dfbba0ec9 proposed control over vital signs check 2024-05-31 06:43:24 +10:00
Grahame Grieve 80159656c0 more language updates 2024-05-30 17:07:05 +10:00
Lloyd McKenzie f808aaf558 Fixed rendering of actor-specific obligations, added elementIds to obligation narrative rendering 2024-05-29 12:09:00 -06:00
Grahame Grieve 1087016941 fix npe rendering code system 2024-05-27 23:55:22 +10:00
Grahame Grieve d279468008 Merge branch 'master' of https://github.com/hapifhir/org.hl7.fhir.core 2024-05-27 23:00:42 +10:00
Grahame Grieve b766cffdb1 v2 tests, support discriminator by position, and don't check type characteristics for unknown types 2024-05-26 07:56:16 -05:00
Lloyd McKenzie a390c9a128 Corrected ObligationsRenderer to handle multiple actors and multiple codes. Also got obligations with elements to render properly (which means knowing whether you're on a table page or definitions page, what tab you're on, and whether the element for the obligation is in-scope for that tab (so you know whether to hyperlink or not). Had to make links on the tables point to definitions because table anchors are not unique. 2024-05-26 06:37:12 -05:00
markiantorno a32e28e4e3 Updating version to: 6.3.11-SNAPSHOT and incrementing test cases dependency. 2024-05-25 23:37:56 +00:00
markiantorno d8781b8b76 Release: v6.3.10
## Validator Changes

* Fix issue validating codes with + in them
* Fix (well, hack) R4 vital signs issue with component units

## WHO I18n Project

* QA on i18n constants - remove spurious entries, add anything missing
* Remove test case for i18n coverage
* Generate properties translation files without blank entries
* Add transifex configuration
* Fix up .po file generation so that POEdit is supported, and remove duplicate constants (#1592)
* Most strings translated to Dutch, unchecked.
* Add utility to infer locale from region code

## Other code changes

* Remove Accept-Charset header
* Fix typos around CODESYSTEM_CONTENT_COMPLETE
***NO_CI***
2024-05-25 22:53:24 +00:00
Grahame Grieve 56b0ad11f3 Fix R4 vital signs issue with component units 2024-05-25 15:11:27 -05:00
Grahame Grieve 4037e5dc4f QA on i18n constants - remove spurious entries, add anything missing 2024-05-25 08:05:25 -05:00
Grahame Grieve 853b4fd9ca stable baseline 2024-05-25 04:25:47 -05:00
Grahame Grieve 5133a88060 Remove Accept-Charset header 2024-05-25 03:44:20 -05:00
Grahame Grieve de544a752e Fix up .po file generation so that POEdit is supported, and remove duplicate constants (#1592) 2024-05-24 19:39:37 -05:00
markiantorno 0d0687f1f1 Updating version to: 6.3.10-SNAPSHOT and incrementing test cases dependency. 2024-05-22 05:52:30 +00:00
markiantorno c47f248fa4 Release: v6.3.9
## Validator Changes

* remove "LOINC 2711-0 Oxygen saturation in Venous blood" from the list in the validator that checks whether an observation is a vital sign

## WHO I18n Project

* fix value set summary line display
* update the source of truth translation files

## Other code changes

* Handle more than one expectation extensions in CapabilityStatement
* Fix NPEs in Liquid renderer
***NO_CI***
2024-05-22 05:02:20 +00:00
Vassil Peytchev ef984e26a9
Merge branch 'hapifhir:master' into master 2024-05-21 18:36:09 -05:00
Grahame Grieve d9c1c74924 Fix NPEs in Liquid renderer 2024-05-21 16:55:17 -05:00