d0df12b85f
Revert to current content on HAPI
2021-02-08 08:40:11 -07:00
b91b68d1a2
Merge branch 'master' of https://github.com/hapifhir/org.hl7.fhir.core
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# Conflicts:
# org.hl7.fhir.convertors/pom.xml
# org.hl7.fhir.dstu2/pom.xml
# org.hl7.fhir.dstu2016may/pom.xml
# org.hl7.fhir.dstu3/pom.xml
# org.hl7.fhir.r4/pom.xml
# org.hl7.fhir.r5/pom.xml
# org.hl7.fhir.r5/src/main/java/org/hl7/fhir/r5/conformance/ProfileUtilities.java
# org.hl7.fhir.report/pom.xml
# org.hl7.fhir.utilities/pom.xml
# org.hl7.fhir.utilities/src/main/resources/Messages.properties
# org.hl7.fhir.validation.cli/pom.xml
# org.hl7.fhir.validation/pom.xml
# org.hl7.fhir.validation/src/main/java/org/hl7/fhir/validation/instance/InstanceValidator.java
# pom.xml
2021-02-08 08:22:58 -07:00
82edacbde4
Merge pull request #434 from hapifhir/gg-2021-feb-1
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Gg 2021 feb 1
2021-02-08 13:28:31 +11:00
ef3b8c1f0a
Fix bug validating mime types without terminology serverBase (warning, not error)
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Performance improvements in JSON metadata based parser
Add first round of supplement validation
improve error message on profile validation fail
fix NPE validating some slices
fix bug validating canonicals as part of choice data types
Adds special support for http://hl7.org/fhirpath/System .* types
fix bug matching slices in contained resources that have references to #
2021-02-08 09:40:25 +11:00
2413ec1dbb
#431 - fix doco about questionnaire
2021-02-08 09:35:52 +11:00
ff02c5b71a
Merge branch 'val_fhirpath_resolveinbundle' of https://github.com/ahdis/org.hl7.fhir.core into ahdis-val_fhirpath_resolveinbundle
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# Conflicts:
# org.hl7.fhir.validation/src/main/java/org/hl7/fhir/validation/ValidationEngine.java
2021-02-08 06:53:38 +11:00
4b416ee5f4
Use FHIRPathEngine where possible
2021-01-27 10:30:45 -07:00
5b5bf912e0
configure fhirpath with resolve bundle func
2021-01-14 15:15:42 +01:00
3ba81328cc
* More rules around URL validation, instead of just marking them as errors
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* Don't report errors for extensible bindings when profiles apply required bindings
* fix rendering issue with profile references
* only use c:\temp if it's writeable
2020-12-24 13:21:30 +11:00
c4db541d7e
fix up validation for R2B issues (value set references, profiled types)
2020-12-18 22:45:39 +11:00
d837214c66
fix up validation of value set for code system and expansions
2020-12-18 22:44:54 +11:00
f5c54d0d6d
fix terminology warning problem
2020-12-15 16:11:32 +11:00
5b52a75d3b
Merge branch 'master' of https://github.com/hapifhir/org.hl7.fhir.core
2020-12-15 07:50:45 +11:00
3d3bda30ec
Code changes to assist with validator updates in HAPI ( #400 )
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* just some cleanup and simple changes
* changed folder name the map is currently structured, not in the past
2020-12-10 10:56:56 -05:00
e2a8581a3b
improve error message for FHIRPath errors when slicing
2020-12-10 13:50:20 +11:00
d432cff826
Fix output message when there's nothing to validate
2020-12-09 10:06:37 +11:00
1532a038c9
Validate that binding references are present, and are for value sets
2020-12-09 10:06:20 +11:00
e7904c8355
fix merge problem
2020-12-05 08:47:25 +11:00
3f9c87ab63
validation fixes ( #397 )
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* Fix validation issues for StructureDefinitions
* Don't try to validate URLs outside HL7 space
* Fix document rendering
* fix failing tests
2020-12-04 16:13:53 -05:00
7de14f172e
Fix validation issues for StructureDefinitions ( #396 )
2020-12-04 16:11:52 -05:00
7d95b27c1f
fix validation of profiles and target profiles in all versions (before R3 different rules)
2020-12-03 16:57:53 +11:00
f3aab0760e
fix error messages on unknown URLs
2020-12-03 12:57:15 +11:00
532aba2485
cache xversion extension manager, and use it in any place accessing extension definitions
2020-12-03 12:52:43 +11:00
87e8f5a36a
Add new validation to check these words in R3+: "Except for transactions and batches, each entry in a Bundle must have a fullUrl which is the identity of the resource in the entry"
2020-12-01 14:52:41 +11:00
9913168321
Pay no attention to the man behind the curtain ( #388 )
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* added back in help file, and removed network logging
* avoid checking ssl certs for build server
* fixing help file loading from cli jar
2020-11-28 09:47:19 -05:00
d4087590bf
hopefully final prep for 5.2.2 ( #387 )
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* Add on the fly retrieval of profiles in the validator, and fix bug where validator reported 'not done yet' for invalid contained references.
* fix loading issue for content references in versions before R3
* fix content resolution issue for versions from before 3
* Fix for bundle renderer trying to render resources from the wrong version
* Fix for wrong reference to Any in cross version extensions
* fix test case reference
* fix mistake generating snapshots around element ids
* fix tests
2020-11-27 09:20:49 -05:00
c51b73feb4
Add support for instance-name and instance-description extensions
2020-11-26 08:55:49 +11:00
40b644adf1
Merge branch 'master' of https://github.com/hapifhir/org.hl7.fhir.core
2020-11-26 06:50:35 +11:00
7e5a670846
Http client update ( #378 )
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* wip
* tests all pass with log outputs identical to original...is it better now? I don't know.
* proxy works, adding a test and docs next
* more cleanup and test fixes
* left in testing file
* didn't need that code anymore
2020-11-24 09:20:43 -05:00
b7d3f36f86
fix package loading issues
2020-11-18 21:05:16 +11:00
7bcec95e9f
restructure validator test cases file
2020-11-18 21:03:58 +11:00
8c0523f3fa
Fix bug in unknown URL handling that could cause significant delays in validation (>1min / unknown URL)
2020-11-13 14:36:10 +11:00
ef3e34ae01
* add styling when adding markdown to table
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* don't apply warning about reference content when it's used as a pattern
2020-11-11 10:12:48 +11:00
7a668bff52
I totally missed this on the code review, and it is entirely my fault. ( #369 )
2020-10-29 12:05:07 -04:00
c5255a0f80
Gg v5118 ( #368 )
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* fix issue validating # references
* Mark it has an error if a JSON Array is empty
* Don't make wrong error reports for profiling resources in bundles
* * Render binding description in profile tables if it doesn't contain paragraphs
* fix bug with wrong value for contentReference in derived profiles (profiles do not and cannot change the value)
* fix bug with wrong value for contentReference in derived profiles (profiles do not and cannot change the value) (missed testing change)
* * fix bug not recognising some content as xml or json
* improved markdown support in table generator
* * fix bug checking unfixed values for HumanName patterns
* fix bug checking patterns (missed in some circumstances)
* fix bug checking type of resources in bundles
* improve messages around cardinality errors in profiles
* add parameter -html-output for enhanced presentation of slicing information (issue #283 )
2020-10-29 09:17:24 -04:00
e1ecd06282
Validator 2 ( #366 )
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* changes to accomodate front end gui for validator wrapper
* removing debug code
2020-10-19 16:39:22 -04:00
36fa3a97af
Validator cleanup ( #365 )
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* cleaning up validator class
* wip
* I left my debug code in
2020-10-16 10:44:01 -04:00
1569532a1c
Validate Profile on type in profile - must be for the right type
2020-10-14 13:21:50 +11:00
96e44048ce
turn off snapshot consistency checking by default + add ability to provide package in line in tests
2020-10-14 13:18:58 +11:00
920c3193d0
enforce constraints in slicer as well as in slice + Handle -tx n/a better
2020-10-14 13:16:59 +11:00
d20582ca9d
revise error message when can't connect to the terminology server
2020-10-08 20:59:39 +11:00
e89da42514
* fix error setting up mapping log
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* fix rendering of definitions in CodeSystems
* fix error rendering bundles in bundles
2020-10-01 12:39:10 +10:00
77d33e8afa
Fix comment parsing and add focus to FHIRPath function extensions
2020-10-01 11:04:34 +10:00
5be73ff9c5
rename org.hl7.fhir.utilities.cache to org.hl7.fhir.utilities.npm
2020-09-30 09:24:26 +10:00
bcb2d8e148
fix questionnaire mode support for validator
2020-09-30 09:23:54 +10:00
1bdf49c7a3
Fix bugs loading content to validate from hapi servers
2020-09-25 15:00:43 +10:00
28e7a19125
Change warnings about invalid codes to hints in retired value sets
2020-09-25 15:00:10 +10:00
73d5a845bf
Add new validation for must-support on types / profiles / targets + improve extension validation
2020-09-25 03:25:59 +10:00
697b23e855
Merge branch 'master' of https://github.com/hapifhir/org.hl7.fhir.core
2020-09-17 16:48:45 +10:00
9e066e637a
Merge pull request #340 from ahdis/oe_ig_dependencies_allowwildcardforpatch
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add patch wildcard for ig dependencies
2020-09-17 16:48:19 +10:00
fa778fbf03
Fix handling resources in bundles when type is profiled
2020-09-17 15:45:47 +10:00
48dca881f3
fix bug in path names for CDA
2020-09-15 10:25:23 +10:00
9fc8b35797
Fix issue with discriminating by address and human name
2020-09-14 18:10:31 +10:00
78b61c4555
Tests should all run now ( #343 )
2020-09-09 12:33:38 -04:00
a47ac539a5
Fix bug loading implied packages with no version
2020-09-09 11:51:09 +10:00
2bb46f2046
Add failing test to test build
2020-09-09 07:04:08 +10:00
6b1ae88e24
add patch wildcard for ig depencies
2020-09-08 09:27:32 +02:00
4dd89160dd
Add validation for html block elements inside paragraphs
2020-09-08 12:45:13 +10:00
b47a1da054
Add check for UCUM annotations + add ValidationControl for hosting the validator in external processes
2020-09-07 13:06:43 +10:00
6cf6367b30
i am unable to write readable code ( #332 )
2020-09-01 17:45:33 -04:00
3a30f0e780
changing validator cli return obj to include more information on error location ( #329 )
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Co-authored-by: Grahame Grieve <grahameg@gmail.com>
2020-09-01 16:02:28 -04:00
89b0e0a32b
Fix NPE in validator and add more validation for bad references
2020-09-01 09:43:21 +10:00
90074b6849
Merge pull request #321 from ahdis/oe_logicalmodel_nonamespace
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handling xml without namespace in logical models
2020-09-01 08:11:29 +10:00
5b2429081a
Merge pull request #324 from ahdis/oe_sectionmultipleauthors
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validation of bundles: allow multiple authors in section
2020-09-01 08:07:15 +10:00
aa9524ed93
various validation fixes ( #327 )
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* Fix must support rendering of pattern values
* Add time tracking for progress reporting
* Add parent tracking for Validation support of nested bundles
* fix rendering of Documents
* rework validation output + fix up package loading in validator
2020-08-31 14:53:34 -04:00
d7bb306cdc
allow multiple authors in section
2020-08-28 16:43:17 +02:00
9578933704
control over aggregation validation
2020-08-27 16:22:21 +10:00
23cce5b0a7
handle xml default namespace for logical model
2020-08-26 16:53:50 +02:00
8505fcf580
adding option to set tx server to null for api calls: ( #316 )
2020-08-25 11:18:14 -04:00
bec72616e0
Add details for better error messages on bad code system urls
2020-08-24 17:15:37 +10:00
8ee4eff74c
fix default value for validator setting + hack work around for R5 broken process
2020-08-20 21:00:11 +10:00
5fc297b3b5
Upgrade R5 to latest version
2020-08-20 20:37:10 +10:00
ced57a5dfe
minor fixes to support main build ( #311 )
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* fix up POMs
* fixes for main build to use packages
* more config for validator
* more options for validation version comparison
* clear notes
* more work on better presentation for comparison
* Remove old comparison code
* remove old comparison code
* fix loading bug
* fix to not load Simplifier packages via lazy loading
2020-08-18 09:27:02 -04:00
eb23fcc5e4
more config for validator ( #309 )
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* fix up POMs
* fixes for main build to use packages
* more config for validator
* more options for validation version comparison
2020-08-17 09:53:54 -04:00
1f433f6643
reduce validation logging
2020-08-16 11:41:53 +10:00
4e30cd7849
Add logging for value set validation performance
2020-08-16 06:48:33 +10:00
5a7e130daa
Improve error message
2020-08-13 23:16:48 +10:00
4133a36c69
improve error message
2020-08-13 17:59:01 +10:00
0b57d266cd
more work on comparison
2020-08-13 17:57:14 +10:00
c5f4d2396f
more work on code validation
2020-08-13 14:28:28 +10:00
008dc84546
Use server side caching to reduce the bandwidth utilitization
2020-08-13 08:14:54 +10:00
6ecf1c8f99
Fix issues with reloading package once already loaded in validator + add test case
2020-08-12 05:11:35 +10:00
20a7682c96
Add support for bundle profile parameter
2020-08-11 06:40:11 +10:00
039027c588
Comparison for CapabilityStatements
2020-08-10 15:57:14 +10:00
f73147523a
Gg v5.0.20 work ( #294 )
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* ongoing work around connection problems with tx.fhir.org
* fix for bug processing CCDA constraints (logical model constraints)
* fix for bug loading Measures from packages
* fix NPEs loading invalid packages
* Start Working on i18n for Rendering + Fix case bug rendering bundles and parameters
* Fix for problem with expansion code checking and incomplete value sets
* release notes
2020-08-06 10:51:05 -04:00
56e4f5b756
work on comparison functionality
2020-08-06 07:39:29 +10:00
4fd6f0e4dc
fix version dependency on test cases
2020-08-04 05:43:16 +10:00
6bdde22026
no validation for CanonicalResource.url (further work needed)
2020-08-03 18:16:00 +10:00
5299bbe16b
* better validation of external references. Note: this is a potentially significant change: things that were called ok before may not be now, and things that were not ok before may become so, depending on the interplay between this and auto-load, further work may be needed here
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* Support better validation of version specific profiles in meta.profile. This may also find new errors that were not previously being found
* Support auto-determination of the version of FHIR to use when using the java validator
* auto-load packages from the package server when references to profiles etc are encountered
* look for references inside other parameters in Parameters resource
2020-08-03 17:40:21 +10:00
1888925293
upgrade version of pubpack
2020-07-31 12:52:02 +10:00
5aec9978bd
fix up tests to pass
2020-07-30 12:35:16 +10:00
4995134716
Merge branch 'master' of https://github.com/hapifhir/org.hl7.fhir.core
2020-07-30 12:04:12 +10:00
eee552cdde
Fix errors in StructureDefinition validation
2020-07-30 12:03:34 +10:00
ea52c4206f
Batch validation of codes in value sets
2020-07-30 11:57:11 +10:00
9c044e5bb5
making changes to accommodate front end code ( #286 )
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* making changes to accomodate front end code
* removing unescessary comments
* kotlin don't take no nulls
2020-07-29 15:28:53 -04:00
b256965738
* fix evaluation of codes in code systems that are labelled content = fragment
2020-07-28 06:06:01 +10:00
a41956e57c
improve error message
2020-07-27 22:39:41 +10:00
7cca76418f
fix loading bug
2020-07-27 17:31:28 +10:00
efa72d367f
rework error handling when expanding valuesets + add error check on value set imports
2020-07-27 13:08:39 +10:00
50dbc9bda1
significant work on tests to support version comparison
2020-07-25 08:38:45 +10:00
Lloyd McKenzie
Grahame Grieve
Jonathan Percival
Oliver Egger
Mark Iantorno