Commit Graph

3511 Commits

Author SHA1 Message Date
Sebastien Brisard a0817f428e Merged BinomialDistribution and BinomialDistributionImpl (MATH-711).
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1205963 13f79535-47bb-0310-9956-ffa450edef68
2011-11-24 19:37:34 +00:00
Sebastien Brisard 936b937517 Merged BetaDistribution and BetaDistributionImpl (MATH-711).
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1205739 13f79535-47bb-0310-9956-ffa450edef68
2011-11-24 07:07:32 +00:00
Luc Maisonobe 645d642b8f Improved Dormand-Prince 8(5,3) step interpolator accuracy at step start.
The previous step is preserved and if interpolation time is in the first
half ot the step, then interpolation is based on step start, otherwise
is it based on step end. Previously, interpolation was always performed
with respect to step end.

If this trick proves useful, it will be extended to other Runge-Kutta
type step interpolators.

JIRA: MATH-705

git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1204270 13f79535-47bb-0310-9956-ffa450edef68
2011-11-20 21:41:46 +00:00
Luc Maisonobe 6d877485ed typo
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1204269 13f79535-47bb-0310-9956-ffa450edef68
2011-11-20 21:40:43 +00:00
Luc Maisonobe 96e2ae350c Fixed wrong unicode character.
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1203682 13f79535-47bb-0310-9956-ffa450edef68
2011-11-18 15:01:56 +00:00
Luc Maisonobe 5d699563b1 Fixed BigFraction percentage method which did not work at all.
JIRA: MATH-709

git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1203516 13f79535-47bb-0310-9956-ffa450edef68
2011-11-18 07:42:12 +00:00
Gilles Sadowski 9591a91f45 MATH-708.
New utility method.


git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1203205 13f79535-47bb-0310-9956-ffa450edef68
2011-11-17 14:33:10 +00:00
Gilles Sadowski e0bf2f8c29 Javadoc.
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1202926 13f79535-47bb-0310-9956-ffa450edef68
2011-11-16 23:10:07 +00:00
Gilles Sadowski 50af1b4d63 Character encoding.
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1202922 13f79535-47bb-0310-9956-ffa450edef68
2011-11-16 23:05:34 +00:00
Gilles Sadowski 1f7ef356d9 Character encoding.
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1202746 13f79535-47bb-0310-9956-ffa450edef68
2011-11-16 15:45:21 +00:00
Gilles Sadowski 4289e3e4ff MATH-697
Added missing constructors.


git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1202186 13f79535-47bb-0310-9956-ffa450edef68
2011-11-15 13:35:45 +00:00
Gilles Sadowski 754434a4c0 MATH-697
New interface and abstract base class for separate support of unconstrained
and simple bounds constraints optimizers.


git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1202140 13f79535-47bb-0310-9956-ffa450edef68
2011-11-15 11:47:25 +00:00
Luc Maisonobe 3ad3a1fa41 Fixed a bad interaction between step handlers and event handlers in ODE
integrators.

The problem was due to an internal array from the step interpolator that
was changed by the step handlers. These array was expected to contain
the state at event time, but was overridden later on. the solution is
simply to clone the array. Note that the fact the array is reused *is*
documented in the javadoc and is a feature of the interpolators ...

JIRA: MATH-706

git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1201105 13f79535-47bb-0310-9956-ffa450edef68
2011-11-11 23:39:34 +00:00
Luc Maisonobe ea13fac876 Added array constructor and getter for Vector2D and Vector3D.
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1200546 13f79535-47bb-0310-9956-ffa450edef68
2011-11-10 21:03:55 +00:00
Luc Maisonobe 0fd55c7ac3 Added applyTo and applyInverseTo methods in the Rotation class that
handle directly arrays instead of Vector3D instances.

Patch provided by Jan Kotek.

git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1200545 13f79535-47bb-0310-9956-ffa450edef68
2011-11-10 21:02:54 +00:00
Luc Maisonobe bb201d926e Added adapters for simple bounds constraints optimization.
The adapters are useful only for optimizers that do not support simple
bounds constraints by themselves (i.e. Nelder-Mead and Torczon's
multidirectional). Two adapters are available, one performs a mapping
between the whole real range and the bounded range (bounds being set
component wise), and one uses a penalty function. 

JIRA: MATH-196

git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1200516 13f79535-47bb-0310-9956-ffa450edef68
2011-11-10 20:08:55 +00:00
Sebastian Bazley dadf9a70a0 Simpify exception checking:
- use expected @Test attribute
- don't catch and rethrow

git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1200430 13f79535-47bb-0310-9956-ffa450edef68
2011-11-10 17:05:51 +00:00
Sebastian Bazley 3d866e964d Need to fail if the exception is not generated
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1200394 13f79535-47bb-0310-9956-ffa450edef68
2011-11-10 15:54:47 +00:00
Sebastian Bazley e92986db74 Unused
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1200393 13f79535-47bb-0310-9956-ffa450edef68
2011-11-10 15:52:30 +00:00
Sebastian Bazley 6c4ee56c3d Javadoc
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1200390 13f79535-47bb-0310-9956-ffa450edef68
2011-11-10 15:47:23 +00:00
Sebastian Bazley 7aefdb81e1 Unnecessary casts; document unused field
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1200384 13f79535-47bb-0310-9956-ffa450edef68
2011-11-10 15:43:02 +00:00
Sebastian Bazley 7774fb6ffb Use asserNotNull(var) instead of if (var != null) and avoid subsequent NPE warnings
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1200365 13f79535-47bb-0310-9956-ffa450edef68
2011-11-10 15:07:47 +00:00
Sebastian Bazley f2c22d1d36 Use asserNotNull(var) instead of assertTrue(var != null) and avoid subsequent NPE warnings
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1200359 13f79535-47bb-0310-9956-ffa450edef68
2011-11-10 15:01:32 +00:00
Sebastian Bazley 416084f964 Javadoc
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1200358 13f79535-47bb-0310-9956-ffa450edef68
2011-11-10 14:58:57 +00:00
Sebastian Bazley 913bc812d3 Unused
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1200354 13f79535-47bb-0310-9956-ffa450edef68
2011-11-10 14:54:20 +00:00
Sebastian Bazley 914be00ae2 Add missing serialVersionUId
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1200351 13f79535-47bb-0310-9956-ffa450edef68
2011-11-10 14:47:07 +00:00
Sebastian Bazley 19ad2142b6 Unnecessary casts - angbd is double, so ensures the rest of the calculation uses double
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1200350 13f79535-47bb-0310-9956-ffa450edef68
2011-11-10 14:43:44 +00:00
Sebastien Brisard 710b276e47 Removed illegal @Override.
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1200334 13f79535-47bb-0310-9956-ffa450edef68
2011-11-10 14:11:06 +00:00
Sebastien Brisard 87f0f14381 Modifications to the hierarchy of distributions, according to MATH-692. Patch contributed by Christian Winter.
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1200179 13f79535-47bb-0310-9956-ffa450edef68
2011-11-10 06:21:56 +00:00
Luc Maisonobe 70667484eb Added a way for user to define tune convergence checking in CMA-ES.
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1198839 13f79535-47bb-0310-9956-ffa450edef68
2011-11-07 17:47:43 +00:00
Luc Maisonobe ae22813ab1 Make CMA-ES input sigma is now consistent with boundaries units.
JIRA: MATH-702

git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1198741 13f79535-47bb-0310-9956-ffa450edef68
2011-11-07 14:12:45 +00:00
Sebastien Brisard 7231b6fe8e Fixed javadoc.
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1198265 13f79535-47bb-0310-9956-ffa450edef68
2011-11-06 08:36:37 +00:00
Phil Steitz eed9207e45 Widened tolerance in mean test.
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1198205 13f79535-47bb-0310-9956-ffa450edef68
2011-11-06 07:44:17 +00:00
Phil Steitz 1088dfd4cb Added Sébastien, fixed alpha sort of developers list.
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1198183 13f79535-47bb-0310-9956-ffa450edef68
2011-11-06 07:32:46 +00:00
Phil Steitz 93604d744b Added stable random generator based on Chambers-Mallows-Stuck method. Contributed by Pavel Ryhzov. JIRA: MATH-462.
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1198165 13f79535-47bb-0310-9956-ffa450edef68
2011-11-06 07:17:50 +00:00
Phil Steitz 0e8d99d456 Space police.
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1198102 13f79535-47bb-0310-9956-ffa450edef68
2011-11-05 22:40:44 +00:00
Phil Steitz 0755c5d8e8 Javadoc improvements.
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1198101 13f79535-47bb-0310-9956-ffa450edef68
2011-11-05 22:27:06 +00:00
Phil Steitz 3fe903b7e2 Changed default seeding for MersenneTwister, WELL generators to add system identity hash code. JIRA: MATH-701.
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1197896 13f79535-47bb-0310-9956-ffa450edef68
2011-11-05 06:48:12 +00:00
Phil Steitz 5ba1f1c695 Made use of system identity hashcode explicit in seed computation. JIRA: MATH-701.
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1197716 13f79535-47bb-0310-9956-ffa450edef68
2011-11-04 19:08:47 +00:00
Phil Steitz e0385f30bf Changed default non-secure generator to Well19937c and changed default seeds to add system identity haschode to timestamp. JIRA: MATH-701.
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1197626 13f79535-47bb-0310-9956-ffa450edef68
2011-11-04 16:20:05 +00:00
Sebastian Bazley 6a5a4c8ca0 Unnecessary casts
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1197491 13f79535-47bb-0310-9956-ffa450edef68
2011-11-04 10:27:18 +00:00
Sebastian Bazley 3a1a95ff3c Fix generics
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1197488 13f79535-47bb-0310-9956-ffa450edef68
2011-11-04 10:23:14 +00:00
Sebastian Bazley 553f0ec8d8 Cannot inherit without a parent to inherit from
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1197483 13f79535-47bb-0310-9956-ffa450edef68
2011-11-04 10:15:01 +00:00
Sebastian Bazley 2a2a74e9d5 Tidy throws clauses
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1197481 13f79535-47bb-0310-9956-ffa450edef68
2011-11-04 10:13:15 +00:00
Sebastian Bazley 76a6378464 Unused imports
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1197476 13f79535-47bb-0310-9956-ffa450edef68
2011-11-04 10:05:19 +00:00
Sebastian Bazley 60516af98d Let's not waste semi-colons ...
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1197475 13f79535-47bb-0310-9956-ffa450edef68
2011-11-04 10:03:39 +00:00
Sebastian Bazley 010bdd1762 Javadoc
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1197474 13f79535-47bb-0310-9956-ffa450edef68
2011-11-04 10:02:02 +00:00
Sebastian Bazley aa27c5dc08 Javadoc
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1197470 13f79535-47bb-0310-9956-ffa450edef68
2011-11-04 09:58:23 +00:00
Sebastian Bazley b6040640af Unnecessary casts
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1197468 13f79535-47bb-0310-9956-ffa450edef68
2011-11-04 09:54:30 +00:00
Sebastian Bazley 68d4f832e3 Unnecessary casts
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1197466 13f79535-47bb-0310-9956-ffa450edef68
2011-11-04 09:51:11 +00:00