43969cb8ce
Fix tests on CLI
2016-04-19 06:35:15 -04:00
59c44a3b0b
More test fixes
2016-04-17 20:57:27 -04:00
f3a41570d3
Try to get tests workign on Travis.. yet again
2016-04-17 19:25:11 -04:00
846e216c04
Fix tests
2016-04-17 12:58:36 -04:00
1af65ff5a8
Fix #335 (also fixes #336 ) - Correctly parse and serialize IDs on elements within a resource
2016-04-17 10:12:34 -04:00
81dec23faf
Correctly populate Bundle.entry.fullUrl on Hl7OrgDstu2 servers
2016-04-14 06:59:43 -04:00
07d86c50d6
Work on cobertura
2016-04-13 08:09:51 -04:00
2f37015d57
Clean up parsers so that elements are always encoded according to their order in the structures that contain them
2016-04-11 08:36:12 -04:00
b81a343f5d
Add support for JPA searches with _tag:not=foo
2016-04-07 09:50:05 -04:00
e30ebf69ba
Fix #325 - Fix equalsShallow and equalsDeep when a field is null on one side and empty on the other
2016-04-05 22:05:45 -04:00
39fc134482
Fix #326 - Correctly serialize DSTU3 references in JsonParser. Thanks to
...
@fw060 for the patch!
2016-04-05 16:33:29 -04:00
079f966086
Parser enhancements when parsing bundles
2016-04-05 08:59:24 -04:00
45390ebc89
Don't parse 1974-12-25+10:00 as this is not a valid FHIR time
2016-04-03 18:45:08 -04:00
1aebff9a43
Add RES_ID indexes to help performance searchin across large datasets
2016-03-27 08:59:39 -04:00
b2f11e0bfc
Fix #317 - Allow search params to be used when doing REST operations
2016-03-26 13:44:54 -04:00
20081a419d
Fix #320 - Don't generate binding enums for example binding fields on
...
resources
2016-03-25 20:15:01 +01:00
6ffb1c8c56
Fix #312 - Don't fail if extension list contains a null
2016-03-25 19:27:18 +01:00
f49130baf8
Add unit tests and documentation to the JAX-RS client implementation
2016-03-25 19:17:41 +01:00
f9fa6265df
Correctly handle JPA search by token with system but no code
2016-03-25 16:20:43 +01:00
de3cd6fdf6
Credit for #321
2016-03-25 11:42:40 +01:00
c6f06548fc
Fix #315 - Use custom types for searches and other client operations
...
when requested
2016-03-24 11:09:41 +01:00
1adfc4b4d9
Fix #315 - Allow declaring of custom types for specific profiles
2016-03-22 11:46:08 +01:00
82c6d82444
Sere up Binary resources as binary content even if the browser puts
...
application/xml in the Accept header
2016-03-18 18:38:44 +01:00
3922ff026e
Merge branch 'master' of github.com:jamesagnew/hapi-fhir
2016-03-16 17:42:54 -04:00
9aa7eea274
Add mode to parser to force it to not encode certain elements when serializing
2016-03-16 07:53:21 -04:00
2ae2cbba23
Roll back site plugin to 3.4. What a nightmare.
2016-03-16 07:01:20 -04:00
9c8d9db7e6
Use separate index columns
2016-03-15 10:35:24 -04:00
00ced6a652
Improve performance of _lastUpdated queries in JPA server
2016-03-14 06:31:45 -04:00
6ddf91d9e2
Correctly handle extended operation in annotation based client where the
...
response is a raw resource and not a Parameters resource
2016-03-12 15:10:02 -05:00
452316aed7
Fix #313 - Do not treat OPTIONS [base]/foo as a request for server's
...
conformance statement. Thanks to Michael Lawley for reporting!
2016-03-12 14:53:20 -05:00
ce253bed70
Properly deserialize bound codes
2016-03-12 13:23:55 -05:00
232afee955
Improved error messages for #305
2016-03-11 07:56:00 -05:00
ed92f64e52
Fix #305 - Don't allow update resource body IDs to be missing or incorrect
2016-03-10 07:44:05 -05:00
3897167518
Return correct bundle type on $everything operation
2016-03-09 23:11:40 -05:00
6f79f6c5e2
Keep the complete resource history in the history table, including the
...
current version
2016-03-09 15:34:49 -05:00
3bfcb57783
Page JPA search results to the database
2016-03-07 07:23:44 -05:00
fb882f899e
Changelog tweak
2016-03-06 12:04:54 -05:00
99a4b2c29e
Refactor JPA SearchBuilder
2016-03-05 20:46:04 -05:00
eba3ca8e59
Improve documentation per Issue #309
2016-03-02 22:44:09 -05:00
0ea8457a00
Fix VRead in web testing UI
2016-03-02 22:35:17 -05:00
b147083f5a
Fix #308 - Remove unneded warning on parsing declared extension
2016-03-02 22:18:33 -05:00
94f50686bc
Fix #304 - Better error message if wrong generic type is used
2016-03-02 07:06:17 -05:00
3fd9f9518a
Handle unexpected extensions when parsing using IParserErrorHandler
2016-03-02 06:52:46 -05:00
c44b23f493
Fix #280 - Don't leave web testing UI buttons disabled when you return to a page via the back button
2016-03-01 07:15:02 -05:00
496d866f48
Fix #274 - Primitive elements with no value but an extension were sometimes not encoded correctly in XML, and sometimes not parsed correctly in JSON.
2016-02-28 22:15:43 -05:00
a0260b9ea9
Note for #299
2016-02-28 19:40:48 -05:00
c7d3f39457
Fix #296 - Handle :missing qualifier on QuantityParam
2016-02-28 18:32:43 -05:00
c14a1330b4
Fix #302 - Don't crash server when adding profiles
2016-02-28 16:07:28 -05:00
524b16b1e8
Fix header generation for clients
2016-02-28 15:44:10 -05:00
1da5855c9c
Add Eclipse files to git
2016-02-28 14:02:29 -05:00
f1e1ee9ff9
Merge JAX-RS client fixes
2016-02-28 13:34:57 -05:00
7fdbee6f21
Merge branch 'master' of github.com:jamesagnew/hapi-fhir
2016-02-26 18:20:32 -05:00
d383b402d1
Correct handling of Binary resources in client and server where the
...
binary contains embedded FHIR content
2016-02-25 14:31:26 -08:00
4a26064cd6
In the client, the create/update operations on a Binary resource (which
...
use the raw binary's content type as opposed to the FHIR content type)
were not including any request headers (Content-Type, User-Agent, etc.) Thanks to Peter Van Houte of Agfa Healthcare for reporting!
2016-02-25 12:54:52 -08:00
d11cbab15c
Don't add WWW-Authenticate header to response on AuthenticationException
2016-02-25 11:03:04 -08:00
1ba0ae3960
Support inline match URL references, per Simone's requast for the next
...
connectathon
2016-02-23 13:12:30 -08:00
6ce4056f7a
Fix #298 - Don't handle /metadata for methods other than GET
2016-02-19 06:40:07 -05:00
43bdfc0345
Fix #297 - Resource not populated in ActionRequestDetails for validate method
2016-02-19 06:21:05 -05:00
4975d212fa
Add userdata map to interceptors which can be passed around
2016-02-17 08:05:55 -05:00
c1141eb18f
Reorganize how search param prefixes are handled and modelled based on new DSTU2 style prefixes
2016-02-15 10:05:39 -05:00
551ec3ab16
Add credit for #293
2016-02-08 22:04:30 -05:00
961cde41bd
Merge branch 'master' of github.com:jamesagnew/hapi-fhir
2016-02-08 14:22:20 -05:00
f21851099c
Version bump
2016-02-08 13:59:09 -05:00
d93c54c0aa
Version bump to 1.5
2016-02-06 14:18:56 -05:00
606dc7b643
Merge branch 'master' of github.com:jamesagnew/hapi-fhir
2016-02-04 22:29:54 -05:00
9da031e2cc
Site updates for 1.4
2016-02-04 22:29:44 -05:00
68b816dce7
Prepare for 1.4 release
2016-02-03 16:56:32 -05:00
2e612eed4d
Merge branch 'master' of github.com:jamesagnew/hapi-fhir
2016-02-03 14:09:13 -05:00
715ab0e269
Credit for #289
2016-02-03 14:08:52 -05:00
9449df7df1
Prepare for 1.4 release
2016-02-03 08:35:05 -05:00
32daeb6f58
Switch DSTU2.1 to DSTU3 per FMB's decision
2016-02-01 08:55:58 -05:00
914f615b8e
Merge branch 'master' of github.com:jamesagnew/hapi-fhir
2016-01-28 11:35:16 -05:00
ecc48317f2
Version bump dependencies
2016-01-28 08:31:19 -05:00
0f07cac496
Fix #286 - Resource chains not added to conformance statement
2016-01-28 07:31:37 -05:00
1bc35f1ba3
Support modifiers on token parameters
2016-01-27 07:05:41 -05:00
7ed14d538a
Remove warning
2016-01-24 14:53:40 -05:00
98dfceb90a
Link to Bill's new example
2016-01-21 21:52:01 -05:00
133660a9ae
Credit for #288
2016-01-21 21:45:57 -05:00
1ba03f4a9b
Fix #283 - Remove servlet 3.0 dependency where possible
2016-01-20 08:11:03 -05:00
d290110126
Fix validation
2016-01-15 18:02:20 -05:00
589059256f
Correct issues uncovered during connectathon
2016-01-11 07:42:13 -05:00
b717c1f0c3
Update docs
2016-01-08 07:32:17 -05:00
e7adebe8d7
Fix #278 - Add alternate configuration as suggested by Karl Davis. Thanks for the contribution!
2016-01-07 21:37:04 -05:00
0c8c414784
Try to get travis working
2016-01-07 11:17:54 -05:00
b7aa4e15b9
Merge branch 'master' of github.com:jamesagnew/hapi-fhir
2016-01-05 08:31:24 -05:00
59da230702
Improving validation documentation
2016-01-05 07:20:54 -05:00
7005cd52d9
Performance tweaks to the validator and get the DSTU2.1 endpoint working
...
with validation
2016-01-04 17:57:00 -05:00
685bd9345b
Add request/response validator interceptors
2016-01-03 21:52:11 -05:00
ccc71c3bd3
Tests should be passing now
2016-01-03 00:19:16 -05:00
5789db8743
Remove dependency on cobertura at compile time
2016-01-02 10:55:52 -05:00
9e110506f7
Merge branch 'master' of github.com:jamesagnew/hapi-fhir
2015-12-16 12:04:54 -05:00
9c37c3b2a0
Use ResponseHighlighterInterceptor in the JPA example project
2015-12-16 12:03:58 -05:00
a623003a56
Fix #240 - Support target resource type in server _include and _revinclude values
2015-12-14 21:50:35 -05:00
d95bd269c0
Correctly encode value[x] field names when the datatype is a profiled type such as markdown
2015-12-14 21:04:27 -05:00
97d6d09663
Work on #240 - Not yet working in JPA
2015-12-14 08:17:33 -05:00
bc9d1712d4
Credit for #265
2015-12-01 18:13:34 -05:00
4398040451
Add count(int) method to fluent client search
2015-12-01 10:22:50 -05:00
fcdf80c6a7
Only do one pass of validation during a JPA transaction
2015-11-29 16:48:57 -05:00
07078e4ce3
Add GZip support to client and server for client-to-server uploads
2015-11-29 15:03:28 -05:00
d47e0e5e77
Add DSTU2.1 resources
2015-11-29 11:43:09 -05:00
45502ba5ff
Credit for #251
2015-11-27 15:03:05 -05:00
e6b47855e6
Merge branch 'master' of git://github.com/petervanhoute/hapi-fhir into petervanhoute-master
2015-11-27 14:59:53 -05:00
e78fcf91c5
Credit for #259
2015-11-26 07:03:01 -05:00
94f309114b
- add site-documentation for jaxrs base
...
- set example for operation on instance level
- remove not thrown exceptions
2015-11-25 15:34:41 +01:00
26e2e2527d
Site updates
2015-11-23 18:14:56 -05:00
c78be081ef
Add CLI test
2015-11-20 10:30:10 +01:00
c12dc82a37
Site updates for 1.3 release
2015-11-15 19:56:57 -05:00
8e24077bcf
Credit for #254
2015-11-15 12:46:42 -05:00
326db08f0e
Merge branch 'master' of github.com:jamesagnew/hapi-fhir
2015-11-14 13:01:52 -05:00
f2ac8a4767
Define Enums for child concepts
2015-11-09 12:54:42 -05:00
e7e820ee52
Merge branch 'master' of github.com:jamesagnew/hapi-fhir
2015-11-08 11:14:22 -05:00
35a6b4dbf0
Fix #253 - Process JPA entries in the correct order
2015-11-08 09:36:04 -05:00
65c4250ed3
Update android distribution
2015-11-06 18:53:54 -05:00
6fd5aecec7
Fix #250 - Honour Accept: text/xml and Accept: text/json
2015-11-05 07:32:33 -05:00
23b35661ea
Bump a few dependency versions
2015-10-31 17:48:25 -04:00
a6d4de1f3e
Add support in JPA for _content and _text for $everything operation
2015-10-31 17:09:32 -04:00
d3685e72ba
Fix #241 and fix #247 - Don't encode UUID IDs on resources, and preserve
...
bundle type when retrieving pages
2015-10-29 15:38:19 -04:00
01320ac1b1
Site updates
2015-10-29 09:14:23 -04:00
30ab0203a3
Refactor search capability in JPA out of resource specific module
2015-10-28 08:44:52 -04:00
65598c200e
Merge branch 'master' of github.com:jamesagnew/hapi-fhir
2015-10-28 07:39:18 -04:00
43c1212840
Revamp the interceptor framework for JPA
2015-10-27 18:34:27 -04:00
5a2ee77142
Parser (XML and JSON) shouldn't encode an ID tag in resources
...
which are part of a bundle when the resource has a UUID/OID
ID.
2015-10-26 22:47:06 -04:00
69658ab754
Merge branch 'master' of github.com:jamesagnew/hapi-fhir
2015-10-23 08:22:40 -04:00
eea406e10e
ResourceReferenceDt#loadResource(IRestfulClient) did not
...
use the client's read functionality, so it did not
handle JSON responses or use interceptors. Thanks to
JT for reporting!
2015-10-23 08:21:25 -04:00
fad59b75b9
Credit for #245
2015-10-21 12:03:36 -04:00
8d515feb6d
Fix #242 - Allow compartment and read method to coexist for server
2015-10-21 11:58:19 -04:00
d838a2bd4b
Reduce JPA uri param length from 256 to 255 to accomodate MySql
2015-10-21 10:37:56 -04:00
ae416dcd62
Improve nexted search/read handing in transactions in JPA server
2015-10-20 10:35:18 -04:00
938a251ae9
Cleanup tests for java config in JPA
2015-10-19 20:19:40 -04:00
9c0f6f993d
Finish converting Spring from XML to Java config
2015-10-17 09:39:27 -04:00
e9d18af5d9
Bump library versions
2015-10-14 18:11:52 -04:00
6d93cbcaae
Get content search working correctly
2015-10-13 09:18:34 -04:00
15b7da184e
Credit for #239
2015-10-12 20:08:11 -04:00
0ab8ee386f
Add documentation for CLI
2015-10-12 18:47:49 -04:00
b827823004
Improve efficiency of JPA queries with _lastUpdated
2015-10-12 09:32:25 -04:00
b62eb1168c
Allow server operations to work at the type level
2015-10-06 11:45:49 -04:00
0958ab6f16
Refactor $everything operations on JPA so that they perform better
2015-10-05 16:49:50 -05:00
80575b5380
Generic client now allows search by URL
2015-10-05 15:30:30 -04:00
43aad1eb98
Properly support chains in JPA conditional URLs
2015-10-04 15:38:58 -04:00
48d56b4722
Fix connectathon discovered issues
2015-10-03 23:52:30 -04:00
aa32e6f0a9
Improve ValueSet operations in JPA
2015-10-02 12:37:56 -04:00
12d95bf43c
Support patient and encounter $everything operations at the type level
...
in JPA
2015-10-02 08:09:17 -04:00
0a5e6043bd
Fix #234 - Invalid entry in OSGi manifest
2015-10-01 18:37:00 -04:00
119a4f36d9
Add error checking and better handling for match URLs in JPA server
2015-10-01 16:54:34 -04:00
541e6cdcb1
Credit for #235
2015-10-01 11:45:33 -04:00
900c93949a
Work on subscriptions, and correct indexing of codes in JPA
2015-10-01 08:56:17 -04:00
9664174b6a
Use updated valueset definitions
2015-09-30 16:35:51 -04:00
f9e4a3e1b5
Fix #233 - elementQuantity gets incorrectly encoded as elementDuration
2015-09-29 19:41:31 -04:00
ca8c257833
Support lastupdate filtering and sorting on JPA everything operation
2015-09-29 13:24:33 -04:00
1cc6a05273
FIx validation for resources using v2 tables
2015-09-29 10:51:36 -04:00
9492744018
Work on subsciprions
2015-09-28 09:06:57 -04:00
51a046ea26
Handle sort by number, uti and token
2015-09-25 16:53:22 -04:00
1361e69177
Respect server default encoding if an Accept header is received which
...
indicates equal weight for both encodings
2015-09-24 17:52:52 -04:00
4ff7452c9b
Fix #227 - JPA server should reject resources with a reference that
...
points to an incorrectly typed
resource (e.g. points to Patient/123 but
resource 123 is actually an Observation) or points
to a resource that is not valid in the
location it is found in (e.g. points to Patient/123 but
the field supposed to reference an
Organization)
2015-09-24 14:47:04 -04:00
072c1ece87
Send Accept header on client requests, and allow string responses in
...
QuestionnaireResponse validator for questions of type OPENCHOICE
2015-09-24 13:40:07 -04:00
70eff0dc7f
Improve error message when $meta-add and $meta-delete are called with no meta element in the
...
input parameters. Also improve OperationOutcome rendering in narrative generator.
2015-09-24 08:36:25 -04:00
7e6844be56
Improve error message when JSON parser finds an object where an array is expected
2015-09-24 07:27:43 -04:00
a15ed8e944
Work on subscriptions, and correct an issue with DateRangeParam where comparators get ignored
2015-09-23 08:36:11 -04:00
f2118df9b8
FIx #225 - Support and/or in JPA on _id and _language params
2015-09-21 21:29:04 -04:00
04c2cce13f
Start working on JPA subscriptions
2015-09-21 09:08:19 -04:00
8fee057de3
Bump Spring and Hibernate versions
2015-09-20 10:18:33 -04:00
d59c0ff404
Correctly index reference paths with multiple paths, and don't store duplicate indexes in JPA
2015-09-20 08:23:03 -04:00
1dd7f4d22a
Site updates
2015-09-18 08:50:31 -04:00
b1df85eb37
Validation now working completely in JPA server
2015-09-15 08:27:49 -04:00
9b69f3a3f8
Credit for #223
2015-09-14 21:28:24 -04:00
d0bac3d419
Work on CLI tool
2015-09-13 22:06:31 -04:00
780fc871cb
It should not be possible to search for deleted resources using the _tag, _id, _profile, or _security search parameters
2015-09-13 09:42:41 -04:00
48ee2cbee8
JPA server now correctly suppresses contents of deleted resources
...
in history
2015-09-12 09:45:12 -04:00
437625505c
Add some tests and some cleanup of unused code
2015-09-09 22:41:10 -04:00
bb5816d8e9
Fix second part of #216 - Correctly encode choice elements on profiled datatypes
2015-09-08 08:01:51 -04:00
9af3fcf02d
Allow browser requetsts to force a raw response
2015-09-07 21:52:35 -04:00
7217458681
Allow storage of Conformance resources in JPA
2015-09-07 21:31:10 -04:00
08633066c6
Fix #216 - Unexpected attributes when parsing composite elements should be logged
2015-09-07 10:08:11 -04:00
abdfb50b40
Fix a few tests and don't crash on old Woodstox
2015-09-04 13:59:57 -04:00
773608f860
Validation documentation
2015-09-04 08:22:06 -04:00
f3e44eea3b
Merge branch 'master' of github.com:jamesagnew/hapi-fhir
2015-09-03 08:08:13 -04:00
8b20f3a77d
Sync to 1.0.0 FHIR definitions
2015-09-03 08:07:43 -04:00
ae177b52e8
Populate Bundle.entry.fullUrl
2015-09-02 13:42:59 -04:00
fa76071bd3
Return last updated time and version ID for instance $meta operation
2015-09-02 11:26:40 -04:00
875ad3b5f9
Correct tag handling for DSTU2
2015-09-02 07:46:52 -04:00
97e6073665
Support URI (and prepare for lat/lon search params) in JPA server, and
...
don't store duplicate tags
2015-09-01 17:02:35 -04:00
e8f5451cc9
Fix a few issues found by FindBugs
2015-09-01 07:05:27 -04:00
a9f978a8a2
Udate to latest DSTU2 definitions
2015-08-31 08:20:24 -04:00
bd13b53099
Fix #212 - Dont accept invalid IDs but do accept IDs starting with a
...
number
2015-08-28 15:36:56 -04:00
073fa47807
Add support for _include:recurse behaviour
2015-08-27 19:44:51 -04:00
5e0a8c476b
Merge branch 'master' of github.com:jamesagnew/hapi-fhir
2015-08-25 07:49:30 -04:00
d5f76f105d
Credit for #211
2015-08-25 07:49:14 -04:00
d6540a9759
Merge pull request #211 from pukkaone/tester-client-factory
...
FHIR Tester application use configured client factory
2015-08-25 07:46:17 -04:00
83a57f8e7c
Auto qualify resource IDs
2015-08-24 18:21:34 -04:00
21564528a0
Fix FHIR Tester documentation formatting
2015-08-24 15:01:47 -07:00
df4d371edc
Add profile and security params for generic search
2015-08-24 15:23:28 -04:00
60339d6f93
Fix #209 - _revinclude results from JPA server should have a Bundle.entry.search.mode of "include" and not "match". Thanks to Josh Mandel for reporting!
2015-08-23 22:25:25 -04:00
11376024fa
Fixing test related to summary and elements mode
2015-08-23 21:51:46 -04:00
ddc66d3ed0
Add support for $validate-code in JPA server
2015-08-20 14:27:19 -04:00
6941f92090
Fix #207 - Confusing error message parsing invalid contained resources
2015-08-17 20:46:56 -04:00
ac564a54d6
Documentation cleanup
2015-08-17 07:57:20 -04:00
330dbde983
Add new interceptor hook for auditing
2015-08-16 22:09:01 -04:00
2766af2693
Update definitions and correctly handle exceptions in
...
incomingRequestPreProcessed method in server interceptors
2015-08-13 16:59:10 -04:00
b36e4e5841
Merge branch 'master' into dstu2_final
2015-08-06 18:07:34 -04:00
43dd081098
Fix compile issues and keep working on android build
2015-08-06 13:13:03 -04:00
jamesagnew
petervanhoute
Chin Huang