leif stawnyczy
a38b791141
issue-2901 added db access method for existence and setting the version to 1 if createplaceholders is true and object does not exist in db
2021-08-31 10:12:40 -04:00
leif stawnyczy
e7c6ce920d
issue-2901 checkin to test
2021-08-30 10:29:59 -04:00
leif stawnyczy
99cd865174
test
2021-08-26 08:47:45 -04:00
leif stawnyczy
646592b1b7
issue-2901 some refactoring
2021-08-25 15:56:55 -04:00
leif stawnyczy
b51c722755
stashing minor refactors
2021-08-25 10:41:58 -04:00
Tadgh
ee9c630228
Merge branch 'master' into issue-2901-npe-in-bundle-transaction
2021-08-23 12:05:31 -04:00
James Agnew
3ebb374059
Avoid redundant resource type selector in _id query ( #2909 )
...
* Fixed
* Add more tests
* Test fixes
2021-08-23 09:04:51 -04:00
Frank Tao
4c2ae513d8
Process bundle batch in parallel ( #2905 )
...
* Process batch in parallel
* Added a test case
* Added more test cases
* Default the bundle batch to single thread.
* Tried transaction before multi-thread.
* Updated the test cases
* Update based on review comments and add changelog
* Updated the changelog
* Restore QueueCapacity
2021-08-20 21:14:08 -04:00
Tadgh
c2e3401185
Move display name
2021-08-19 17:25:51 -04:00
Tadgh
3556299332
Add another failing Test
2021-08-19 17:25:15 -04:00
Tadgh
19d181989c
Add another failing test
2021-08-19 14:52:48 -04:00
jamesagnew
bb0552d0db
Changelog tweak
2021-08-19 12:59:51 -04:00
James Agnew
85517c47e2
Include includes on revincludes ( #2902 )
...
* Include includes on revincludes
2021-08-19 12:31:29 -04:00
Tadgh
07937e4431
Start with failing test
2021-08-19 10:35:14 -04:00
Tadgh
17af21e351
Merge pull request #2886 from hapifhir/remove-examples
...
Remove examples
2021-08-18 11:10:21 -04:00
Tadgh
7ee22a44c1
Merge pull request #2893 from hapifhir/issue-2883-unable-to-load-OpenAPI-docs
...
Issue 2883 unable to load open api docs
2021-08-16 15:59:57 -04:00
katie_smilecdr
b2a91eb92d
[2883] Add unit test
2021-08-16 14:32:49 -04:00
katie_smilecdr
f97e703180
Merge branch 'master' into issue-2883-unable-to-load-OpenAPI-docs
2021-08-16 14:28:27 -04:00
akawalsky
c8c0e1080c
Update Search operation description ( #2892 )
2021-08-16 12:28:19 -04:00
katie_smilecdr
4baca0a282
[2883] Add changelog
2021-08-16 11:28:30 -04:00
katie_smilecdr
62026d4caf
[2883] Resolve threads
2021-08-16 10:56:13 -04:00
katie_smilecdr
36d2a8f3ce
[2883] update swagger url/ add unit test
2021-08-13 13:54:27 -04:00
Frank Tao
4920f0a15d
Don't create designation of all components are empty ( #2891 )
...
* Don't create designation of all components are empty
* Fixed typo
2021-08-13 11:01:50 -04:00
Tadgh
8145a2ecb2
Tidy pom
2021-08-12 10:05:13 -04:00
Tadgh
1c81cb8688
Remove example projets
2021-08-12 09:13:06 -04:00
katie_smilecdr
dfb8ec4680
[2883] remove slash before api-docs
2021-08-11 16:56:34 -04:00
jmarchionatto
e355e96457
Merge pull request #2882 from hapifhir/issue-2881-loinc-terminology-upload-doesnt-load-concepts-when-current-versionfalse
...
Save version collections also when version is not made current.
2021-08-11 14:28:38 -04:00
juan.marchionatto
fb855620da
Save version collections also when version is not made current.
...
Add test covering bug.
2021-08-11 12:49:54 -04:00
Tadgh
29545d9adc
Merge pull request #2879 from hapifhir/mail_cleanup
...
fix SimpleJavaMail configuration username and password handling
2021-08-10 10:48:56 -04:00
Vadim Karantayer
f68040aae9
fix SimpleJavaMail configuration username and password handling
2021-08-10 10:45:30 -04:00
Tadgh
3edb59475c
Merge pull request #2877 from hapifhir/2876-npe-mdm-resource-util
...
NPE in MdmResourceUtil
2021-08-10 08:13:19 -04:00
Tadgh
97f88202eb
Fix Changelog typo
2021-08-10 08:12:54 -04:00
Tadgh
1dfaf73066
Merge branch 'master' into 2876-npe-mdm-resource-util
2021-08-09 19:21:58 -04:00
Tadgh
bfd9dffdbe
Allow jira field in changelog
2021-08-09 19:09:40 -04:00
Tadgh
d5fe1eeef7
Move test out of IT
2021-08-09 16:13:47 -04:00
Tadgh
416a52c679
Add changelog, fix code
2021-08-09 16:02:19 -04:00
VK-SMILECDR
1e0f843d6c
2852 - Simplify java mail code ( #2874 )
...
* testing
* [2852] adding SimpleJavaEmail
* [2852] refactor email sender code
* [2852] dependency cleanup
* [2852] add missing dependency
* [2852] add missing spring framework test dependency
* [2852] add change log
* [2852] add change log
* Update hapi-fhir-docs/src/main/resources/ca/uhn/hapi/fhir/changelog/5_5_0/2852-simplify-java-mail-code.yaml
Co-authored-by: Tadgh <tadgh@cs.toronto.edu>
* [2852] minor test code cleanup
* [2852] add more tests
Co-authored-by: Tadgh <tadgh@cs.toronto.edu>
2021-08-09 15:59:47 -04:00
Tadgh
a7f0929405
Merge pull request #2875 from hapifhir/bump-version-5-6-0
...
Bump version to 5.6.0-PRE1-SNAPSHOT
2021-08-09 10:19:32 -04:00
Tadgh
fa2b4ea0d7
Add version number
2021-08-06 14:08:10 -04:00
Tadgh
4fadc62066
Bump Hapi Version
2021-08-06 13:44:04 -04:00
Frank Tao
3c598e2ff8
Fix loinc designation issue with FormalName ( #2865 )
...
* Fix loinc designation issue with FormalName
* Changed Loinc designation name to 'FullySpecifiedName'
2021-08-06 10:59:01 -04:00
Kevin Dougan SmileCDR
35d3e3689b
2829 - Add DSTU3 Support To UploadTerminologyCommand ( #2832 )
2021-08-05 13:07:50 -04:00
michaelabuckley
67682a86fb
Merge pull request #2862 from hapifhir/mb-20210804-combo-index-ioob
...
Hack to fix a weird IOOB error we can't reproduce.
2021-08-04 16:24:47 -04:00
Michael Buckley
d85a4e5ec2
Hack to fix a weird IOOB error we can't reproduce.
2021-08-04 16:08:38 -04:00
jmarchionatto
66e1f10f5f
Merge pull request #2821 from hapifhir/issue-2786-upload-terminology-command-add-explicit-current-version-control
...
Issue 2786 upload terminology command add explicit current version control
2021-08-03 16:55:49 -04:00
juan.marchionatto
cb68c59fb5
Remove validation in code which will never reached for the conditions.
2021-08-03 15:39:02 -04:00
juan.marchionatto
45549d2bb9
Fix broken ITs.
...
Add error message for non-snapshot upload with current version = false combination.
2021-08-03 14:11:14 -04:00
juan.marchionatto
1ff1954cba
Merge branch 'master' into issue-2786-upload-terminology-command-add-explicit-current-version-control
2021-07-30 11:20:23 -04:00
juan.marchionatto
4e8b1719f3
Add test for fixed use case
2021-07-30 10:48:10 -04:00
Ken Stevens
f5dfc3a5ed
New reindex spring batch operation ( #2845 )
...
* first sweep to add new $reindex job
* first cut done. next up integration test.
* start roughing out reindex everything
* Failing test
* test passes
* add BundleUtil helper method
* rough in processEverything
* rough in processEverything
* fix mock test
* merge master
* Make BaseJpaTest.mySrd lenient.
* fix test
* reindex everything works with FIXMEs
* reindex everything more tests
* moar tests
* moar tests
* fix test
* fix test
* fix regression and fix test
* fix test cycle
* fixme
* fix test
* test provider layer
* reindex everything partition aware
* yay last fixme!
* run reindex in partitioned threads
* add fixmes for areas that require extra testing
* added transaction and log message
* manual integration testing
* changelog
* reindex all partitions
* bump hapi version
* fix test
* moar test
* pre-review cleanup
* fix javadoc
* review feedback
* review feedback
* review feedback
* Update hapi-fhir-docs/src/main/resources/ca/uhn/hapi/fhir/changelog/5_5_0/2845-reindex-operation.yaml
Co-authored-by: michaelabuckley <michaelabuckley@gmail.com>
* review feedback
* review feedback
* Update hapi-fhir-jpaserver-base/src/test/java/ca/uhn/fhir/jpa/delete/job/ReindexJobTest.java
Co-authored-by: michaelabuckley <michaelabuckley@gmail.com>
* Update hapi-fhir-jpaserver-base/src/test/java/ca/uhn/fhir/jpa/delete/job/ReindexJobTest.java
Co-authored-by: michaelabuckley <michaelabuckley@gmail.com>
* Update hapi-fhir-jpaserver-base/src/test/java/ca/uhn/fhir/jpa/provider/r4/MultitenantBatchOperationR4Test.java
Co-authored-by: michaelabuckley <michaelabuckley@gmail.com>
* Update hapi-fhir-jpaserver-base/src/test/java/ca/uhn/fhir/jpa/provider/r4/MultitenantBatchOperationR4Test.java
Co-authored-by: michaelabuckley <michaelabuckley@gmail.com>
* Update hapi-fhir-jpaserver-searchparam/src/main/java/ca/uhn/fhir/jpa/searchparam/ResourceSearch.java
Co-authored-by: michaelabuckley <michaelabuckley@gmail.com>
* Update hapi-fhir-server/src/main/java/ca/uhn/fhir/rest/api/server/storage/IDeleteExpungeJobSubmitter.java
Co-authored-by: michaelabuckley <michaelabuckley@gmail.com>
Co-authored-by: michaelabuckley <michaelabuckley@gmail.com>
2021-07-29 19:18:49 -04:00
