0fd5a44b5e
Fixed #622 Extension lost on ID datatype or extension of type primitive during parsing
2017-07-24 13:43:55 +02:00
ecac0ffb5f
Add junit test
2017-07-14 12:51:19 +02:00
f7d4296046
Tweak to #683
2017-07-14 06:16:41 -04:00
ef3f7202dc
Merge pull request #683 from CarthageKing/bugfix-issue634
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Correctly serialize STU3 ConceptMap and ActivityDefinition element order
2017-07-14 06:14:05 -04:00
1a6b3ea867
Work on #682 - Allow fewtching structure definitions by relative URL
2017-07-12 17:05:43 -04:00
0dacf8d82a
Add test for #682
2017-07-12 15:39:33 -04:00
65cc41e376
Allow patch to proceed with AuthorizationInterceptor
2017-07-12 11:14:14 -04:00
11aa1c5a9e
fix for #659
2017-07-10 18:10:31 -05:00
9aaa49dd94
add test to show issue #659
2017-07-10 14:35:06 -05:00
a8e248036e
Fix STU3 validation: find correct extension profile, use custom datatype profile, allow to disable terminology checks
2017-07-10 12:38:33 +02:00
d26fba161e
remove '[x]' from paths in @ChildOrder annotation because they mess up
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'forcedOrder' resolution in
BaseRuntimeElementCompositeDefinition.scanCompositeElementForChildren()
method
2017-07-03 16:06:52 -05:00
c9fcef0372
Clean up handling of searches nested in batch and transaction
2017-06-30 16:20:32 -04:00
5789cd2a46
Merge branch 'master' of github.com:jamesagnew/hapi-fhir
2017-06-19 06:18:58 -04:00
e6cb973f5f
Add test
2017-06-17 08:29:30 -04:00
b474a1f2ef
Merge branch 'master' of github.com:jamesagnew/hapi-fhir
2017-06-16 10:00:27 -04:00
507cac3127
Respect prefer header on transaction processing
2017-06-16 09:52:12 -04:00
7588a2ecff
Modify patch for #655 so that it fixes #604 without causing us to allow
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invalid values
2017-06-09 16:30:20 -04:00
872d72629c
#604:allow MINUTE precision for datetimes
2017-06-09 15:21:53 -04:00
c2e5fa3f18
Fix #667 - When using the AuthorizationInterceptor with the JPA server, when a client is updating a resource from A to B, the user now needs to have write permission for both A and B
2017-06-09 11:48:17 -04:00
14edc79ac1
Version bump to 2.6-SNAPSHOT
2017-06-09 07:28:29 -04:00
8b5209ff67
Version bump to 2.5
2017-06-08 06:34:44 -04:00
c04146a76a
Revert "Allow MINUTE precision for datetimes. Closes #604"
2017-06-07 21:42:52 -04:00
1b557b05f0
Merge pull request #655 from ohr/master
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Allow MINUTE precision for datetimes. Closes #604
2017-06-07 21:30:33 -04:00
7c6bb01a8b
Don't allow JPA server to save duplicate or empty tags, and fix #664 by
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preventing multiple threads from loading structure definitions for
validation at the same time
2017-06-06 16:44:13 -04:00
6168f4ab32
FIx JDK7 dep
2017-05-26 21:35:40 -04:00
7d659c88e5
Validator incorrectly rejected references where only an identifier was
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populated
2017-05-26 21:32:12 -04:00
aafde2eceb
#604:allow MINUTE precision for datetimes
2017-05-26 15:27:58 +02:00
6cf3d865f0
Fix test
2017-05-25 16:06:44 -04:00
b96932a5c5
Fix dependency on new version of commons-codec
2017-05-25 15:24:47 -04:00
5bdd10c7ab
Include patient in $everything even if there are no other resources
2017-05-24 14:24:01 -04:00
45041830bc
Server now respects the If-Modified-Since header for read operations
2017-05-17 14:57:05 -04:00
a92d80d860
Correctly encode extensions on the root of a resource with type
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reference
2017-05-17 12:40:10 -04:00
7f2faae85e
Fix #563 : JSON Parser gave a very unhelpful error message (Unknown attribute 'value' found during parse) when a scalar value was found in a spot where an object is expected. This has been corrected to include much more information
2017-05-15 18:06:55 -04:00
83c8036eda
Fix broken test
2017-05-02 09:30:26 -04:00
11948a27d6
Ignore test that doesn't pass yet
2017-05-02 09:22:04 -04:00
1af36db7f7
Add unit test only
2017-05-02 09:20:45 -04:00
bb9cd7c198
Add configuration property to DSTU3 FhirInstanceValidator to allow client code to change unknown extension handling behaviour.
2017-04-23 19:28:45 -04:00
716fa56b8f
Merge branch 'jpa_perf_enhancements'
2017-04-21 06:30:22 -04:00
cbc652d226
Version bump to 2.5-SNAPSHOT
2017-04-20 16:13:15 -04:00
f01a1cb1e9
Fix #627 - Accidental rename of some codesystem files to text during
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sync
2017-04-20 06:04:09 -04:00
9d3d15ce6f
Version bump to 2.4
2017-04-19 21:38:36 -04:00
64fb9cfa68
Merge branch 'dstu3_latest_structs'
2017-04-18 22:12:53 -04:00
077676fd03
Bring DSTU3 structs up to FHIR R3
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Squashed commit of the following:
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2017-04-18 07:48:38 -04:00
1df2de0667
Working
2017-04-18 07:12:45 -04:00
9a51323e03
Updates to STU3
2017-04-17 22:18:24 -04:00
40aebba0a7
Fix regression caused by #610
2017-04-17 18:30:26 -04:00
6a5d0f95ae
Add double-check for #610
2017-04-17 18:10:57 -04:00
9201692c70
Merge pull request #610 from dangerousben/init-race-condition
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Fix FhirContext initialisation race condition.
2017-04-17 18:02:06 -04:00
c66e147ec8
Merge pull request #613 from SRiviere/jaxrs-sever-evolution
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Changing with stackTrace paramter without server restart
2017-04-17 17:56:33 -04:00
282e02801a
Merge pull request #624 from CarthageKing/feature-make-bundle-fullurl-override-configurable
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Feature make bundle fullurl override configurable
2017-04-17 17:46:45 -04:00
217d9f8176
More perf work
2017-04-16 14:46:15 -04:00
913fd422a1
Merge branch 'master' into jpa_perf_enhancements
2017-04-14 11:30:19 -04:00
15cc766000
Fix some compile issues
2017-04-14 11:27:37 -04:00
125f9b4fed
JsonParser tests for OverrideResourceIdWithBundleEntryFullUrl
2017-04-13 13:37:02 -05:00
b890bf3c75
XmlParser tests for OverrideResourceIdWithBundleEntryFullUrl
2017-04-13 12:09:31 -05:00
23b7de5dd8
More perf work
2017-04-12 18:28:10 -04:00
e99495a83f
Adding Unit tests to reproduce : Extension of Id Datatype and Extension of primitive extension lost during parsing/encoding #622
2017-04-12 10:00:32 +02:00
6ab1cb4c2e
Fix compile issues from new version of errorprone
2017-04-03 14:43:59 -04:00
42819dba77
Fix FhirContext initialisation race condition.
2017-03-28 17:24:48 +01:00
40848b1beb
Version bump to 2.4-SNAPSHOT
2017-03-18 12:24:39 -04:00
e18ab206d7
Version bump to 2.3
2017-03-17 21:21:59 -04:00
b59dd77bfc
Fix compile error
2017-03-17 21:10:50 -04:00
8758b6f3da
Updating to 1.9.0 structures
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Squashed commit of the following:
commit 81edf46fe02a88851693f958e60855edfe69c04c
Author: James Agnew <jamesagnew@gmail.com>
Date: Fri Mar 17 21:05:22 2017 -0400
Work on converter
commit 3342d987008892dd3a75dddd251fe599c31c5a6c
Author: James <jamesagnew@gmail.com>
Date: Fri Mar 17 08:40:37 2017 -0400
Site updates
commit 7dcb63904ece1fcb59a09dc268e8382ac0b75535
Author: James <jamesagnew@gmail.com>
Date: Fri Mar 17 08:36:39 2017 -0400
STU3 structs working!
commit c5aec809e3f19f3fedf0aaaeab8cdd7924c144a2
Author: James <jamesagnew@gmail.com>
Date: Fri Mar 17 07:05:54 2017 -0400
Format test
commit 5033090010e8c93644505bccaa5e41ccbd756485
Author: James <jamesagnew@gmail.com>
Date: Fri Mar 17 07:03:39 2017 -0400
Merge tests for STU3
commit de40a516bfa4d2ab7f5e28e2d95815fde68bd10a
Merge: d5a5a60 899ed25
2017-03-17 21:06:12 -04:00
45e4bd92ee
Merge branch 'master' into jaxrs-sever-evolution
2017-03-16 22:04:55 -04:00
5282110f02
Tests for #142
2017-03-16 22:00:04 -04:00
01d102accc
Correct handling of contained resources in a response for annotation
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client
2017-03-01 17:23:31 -05:00
f1828d1ca8
Fix handling of filters on valueset expansions
2017-02-10 11:05:59 -05:00
c3447c3b4d
Remove substitution string to use relative url, Fix client parser and custom extension.
2017-02-08 11:14:19 +01:00
cb8492d353
Fix occasionally failing test
2017-02-07 20:10:06 -05:00
a665aed85d
Merge branch 'master' of github.com:jamesagnew/hapi-fhir
2017-02-07 07:01:59 -05:00
b7f165019d
Tweak re-indexing
2017-02-07 07:00:51 -05:00
c836a8905e
Add test for #551
2017-02-06 11:48:19 -05:00
3bf6555d61
Merge branch 'master' of https://github.com/jamesagnew/hapi-fhir into jaxrs-sever-evolution
2017-02-06 11:34:31 +01:00
7149d2e053
Merge branch 'custom_jpa_search_params'
2017-02-04 16:34:05 -05:00
dd0e47afc3
Make projects import cleanly into eclipse
2017-02-04 16:31:18 -05:00
3f8a8cd8aa
Merge pull request #548 from sekaijin/cleanup
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Cleanup
2017-02-04 16:02:50 -05:00
b4a362b8ee
Work in progress
2017-02-01 05:55:35 -05:00
b66aa9761e
Allow parsing of RSQuot
2017-01-29 15:49:10 -05:00
a150a96089
dependencies convergence
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correct dependencies convergence
correct version use ${project.version}
2017-01-29 19:22:28 +01:00
23784c1619
remove .settings .project .classpath file of eclipse
2017-01-28 17:13:47 +01:00
dabb3ea2c5
Merge branch 'master' of https://github.com/jamesagnew/hapi-fhir into jaxrs-sever-evolution
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# Conflicts:
# hapi-fhir-structures-dstu3/src/test/java/ca/uhn/fhir/parser/JsonParserDstu3Test.java
2017-01-27 10:16:43 +01:00
12598b4e3b
Correctly handle declared extensions with multiple possible types
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Squashed commit of the following:
commit d6ea0552b7e5876f7d867e573c2299234b4a0c1c2eb780a690
2017-01-26 11:07:52 -05:00
589804d974
Add test
2017-01-24 13:57:15 -05:00
344e324929
Fix #544
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Squashed commit of the following:
commit 1ab9b58e9f5c752cdace127b76884a599bbe236c#544
2017-01-24 10:47:24 -05:00
d1542e98c5
JPA server was not correctly validating and expanding SCT codes
2017-01-19 17:37:43 -05:00
64e3435a8e
Merge branch 'master' of github.com:jamesagnew/hapi-fhir
2017-01-19 15:50:48 -05:00
e342d211d1
Add some logging and a test
2017-01-19 15:50:41 -05:00
13646168f0
Use the profile of the datatype if available, intead of the default hl7.org url
2017-01-19 14:55:42 +01:00
cac44c736c
Add the possibility to use the serverBaseUrl to generate the url of extension, if %BASE_SERVER_URL% is found
2017-01-19 14:54:17 +01:00
06f9d86bf1
Fix bad dependency
2017-01-18 22:26:10 -05:00
b80897d16c
Add warnign to DateType
2017-01-18 22:12:48 -05:00
322051a383
Fix failing tests
2017-01-14 07:55:42 -06:00
dbc6abc658
Fix #504 - Error if custom type has illegal extensions
2017-01-13 21:46:16 -06:00
fa1ad5ba85
Fix #519 - Issues with JPA capabilitystatement related to the _id param
2017-01-13 21:19:19 -06:00
f9aa8c3ba4
Add test for #531
2017-01-13 11:35:15 -05:00
b448e13edd
Version bump to 2.3
2016-12-20 19:01:31 -05:00
0ec61533a8
Publish 2.2
2016-12-20 19:00:37 -05:00
750d6d4655
Switch public server to use CapabilityStatement for metadata return type
2016-12-20 15:35:54 -05:00
18e47c2130
More validator tests
2016-12-20 09:30:46 -05:00
964919d880
Improve parsing
2016-12-19 14:03:11 -05:00
88117f8d6e
Port in changes from RI
2016-12-12 07:32:53 -05:00
e30d478bf6
Add suggested test for #523
2016-12-12 07:25:10 -05:00
ab17ee68a3
Revert IFhirVersion method signature changes for #520
2016-12-11 18:55:59 -05:00
a2b24d4d07
Fix compile error
2016-12-11 18:27:10 -05:00
2bca44eb1e
Merge pull request #523 from CarthageKing/master
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ensure ElementDefinition properties with longer names are processed first in order to find the property that most matches the given nodeName
2016-12-11 18:12:46 -05:00
9cb014724b
Add validator for DSTU2.1
2016-12-11 17:39:05 -05:00
901a85880c
Update STU3 definitions and being in STU2.1 defs too
2016-12-10 19:51:25 -05:00
b0d656e5d9
Refactor fix for #520 a bit so that version in DSTU3 is always pulled
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from the model
2016-12-10 14:40:27 -05:00
ee63bbea74
Fix #516 - Handle STU3 invalid enum values with an appropriate exception
2016-12-10 14:14:22 -05:00
0def3d5a72
Merge pull request #525 from aehrc/feature/parser_exception_handling
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#516 Report invalid values for enums through parser error handler
2016-12-10 07:39:36 -05:00
5149e581db
Fix #521 - Wrong or missing ID body in update should be an error
2016-12-08 08:31:52 -05:00
a9a3507544
#516 Report invalid values for enums through parser error handler
2016-12-06 10:32:23 +10:00
7a203fa7d5
ensure ElementDefinition properties with longer names are processed
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first in order to find the property that most matches the given nodeName
2016-12-02 21:42:09 -06:00
a9d7b8d636
Add test and credit for #518
2016-11-25 18:28:18 -05:00
81773de261
Fix #276 - Prevent contained resources being encoded as duplicates
2016-11-25 17:18:57 -05:00
69871bb8c2
Improve testing on CorsInterceptor
2016-11-24 19:25:37 -05:00
233e979963
Fix build
2016-11-22 06:33:20 -05:00
888f42a032
Introduce new CORS interceptor and switch examples to use it
2016-11-21 18:30:51 +01:00
03935be97f
Work on common FluentPath interface
2016-11-21 15:52:17 +01:00
5846ce4518
Make the parser configurable so that when parsing an invalid empty value (e.g. {"status":""} parser will either throw a meaningful exception or log a warning depending on the configured error handler.
2016-11-21 14:48:44 +01:00
bf35f7e4b2
Fix #495 - Auto-detect DSTU3 mode when those resources are on classpath
2016-11-21 13:44:54 +01:00
ba896e2553
Clean up CORS
2016-11-21 13:37:59 +01:00
72a62817aa
Improve detection for #477
2016-11-15 05:54:56 -05:00
4252415e9c
Fix #477 - Gracefully handle unexpected elements starting with _
2016-11-15 05:44:45 -05:00
2d7592f7a8
Version bump to 2.2-SNAPSHOT
2016-11-11 22:39:45 -05:00
2dd26b6367
Version bump to 2.1
2016-11-11 15:16:53 -05:00
a03805a6d4
Clean up patch client
2016-11-11 15:08:16 -05:00
a5d5d3e031
Bump FHR version
2016-11-06 17:34:13 -05:00
8c53ad24f7
Clean up authorization interceptor tests
2016-11-03 08:10:54 -04:00
3a5a771de7
Fix #484 - Correctly parse resources containing an empty div tag as the narrative
2016-11-03 07:51:11 -04:00
f5bec16cb4
Fix tests for #472
2016-10-26 14:10:43 -04:00
a67171e231
Fix #472 - Wrong header being returned (Content-Location instead of
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Location) on STU3 server
2016-10-26 12:12:19 -04:00
f80bf98dcd
Fix #327 - Correctly serialize JSON extension with a reference to a
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contained resource
2016-10-14 16:36:29 -04:00
e56c75e80c
Switch Android library to use OkHttp by default
2016-10-14 16:15:27 -04:00
deae820ebe
Fix up comnpile issue
2016-10-12 15:29:40 -04:00
97cd78e6bf
Fix #454 - Chinese characters were not being correctly normalized
2016-10-12 12:50:56 -04:00
11d3ae9447
Fix #411 - Searching by POST with urlencoded parameters doesn't work if
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interceptors are accessing the parameters and there is are also
parameters on the URL
2016-10-06 13:23:32 -04:00
f5eda76388
Use new STU3 mimetypes by default
2016-10-06 12:17:59 -04:00
1fd881d8f8
Return an error if a parameter is called with a chain even though it
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doesn't support chaining
2016-10-04 17:02:13 -04:00
26cd316343
Fix #414 : Parser should not choke with a NullPointerException if it
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encounters an extension without a URL
2016-09-30 17:35:29 -04:00
8b80d932da
Fix #443 - XhtmlNode.equalsDeep() did not work
2016-09-29 15:00:01 -04:00
5da1d22d02
Docs
2016-09-28 17:04:55 -04:00
8a9a031a8d
Fix uploading CLI DSTU2 examples
2016-09-28 16:25:01 -04:00
090f079442
Try to fix race conditions in tests
2016-09-26 12:56:37 -04:00
cb31e706c7
Add test for #411
2016-09-26 10:50:04 -04:00
714adcd4be
Merge branch 'master' of github.com:jamesagnew/hapi-fhir
2016-09-22 21:55:11 -04:00
3428aa40f3
Logging changes
2016-09-22 21:55:05 -04:00
3d73aad275
Fix unit tests
2016-09-21 16:58:57 -04:00
ae97165a0a
Add interceptor method on server which will be called after all other
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processing
2016-09-18 16:08:16 -04:00
b20a5e6b90
Bundles for history did not validate
2016-09-18 10:28:24 -04:00
40286f49c2
Merge branch 'patch' of github.com:jamesagnew/hapi-fhir into patch
2016-09-17 23:40:54 -04:00
1343badba4
Working on patch
2016-09-17 13:40:03 -04:00
364c18e06e
Use more compatible Accept header in STU3 client. Also fixes missing
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Woodstox library in android builds per #450 )
2016-09-16 23:46:06 -04:00
f92c5a7232
Fix #446 - Don't give child resources the ID of the parent
2016-09-16 15:01:14 -04:00
12790d385c
Fix #445 - Server was using the wrong mimetype for conf statement
2016-09-16 13:25:03 -04:00
a2ffc6af05
Fix #444 - Correct handling of parsing milliseconds in dates before 1970
2016-09-09 18:18:28 -04:00
d41b412dee
Fix #440 - Don't depend on Saxon
2016-09-08 15:56:15 -04:00
202a1ea885
Fix web testing UI regression
2016-09-06 17:59:04 -04:00
98e0753b93
Properly add include resources
2016-08-30 16:38:09 -04:00
906bcfb803
Version bump to 2.1
2016-08-30 10:55:55 -04:00
d27aad487e
Bump to 2.0 release
2016-08-30 10:50:04 -04:00
333aa0afde
Correctly update versions on transactipn update
2016-08-28 22:56:59 -04:00
ddc0abe4ed
Update to final STU3 ballot definitions
2016-08-26 07:55:10 -04:00
a1105fac1e
Merge branch 'master' of github.com:jamesagnew/hapi-fhir
2016-08-25 18:27:32 -04:00
17940b8a24
Improve performance when parsing contained resources
2016-08-25 17:41:33 -04:00
acdbdc0be7
Fix #426 - Extension with datatype of ID failed to parse
2016-08-25 07:32:37 -04:00
c4d302df8d
Upgrade to Thymeleaf 3
2016-08-23 19:11:49 -04:00
82da79cd5f
Add a new test
2016-08-23 13:49:31 -04:00
cc6c32f987
Fix tests
2016-08-22 09:43:01 -04:00
7f15520db8
Don't include Location header in server responses for DSTU3 servers
2016-08-21 11:39:44 -07:00
da8abca1ff
Add custom extension example
2016-08-21 10:24:42 -07:00
379abb8e47
Don't strip urn: prefixes from references when encoding
2016-08-16 11:23:07 -07:00
eee168ced6
Add support for conditional operations to AuthorizationInterceptor
2016-08-15 13:35:50 -04:00
b0d19c3a65
Fix #423 - Encode custom types with custom type fields correctly
2016-08-14 13:05:16 -04:00
8354f4b565
Use correct accept header
2016-08-05 18:39:44 -04:00
74950a4efc
Fix regression when parsing contained resources
2016-08-05 18:01:44 -04:00
a3f4864bd6
Merge branch 'master' of github.com:jamesagnew/hapi-fhir
2016-08-05 12:37:06 -04:00
3e7cd153fd
Update DSTU3 definitions to latest
2016-08-05 12:36:41 -04:00
545b359697
Fix #406 - Allow arbitrary authentication realm
2016-08-01 21:36:50 -04:00
dd8b1cd979
Use corrrect types from client
2016-07-27 18:15:09 -04:00
7dbd5a21ca
Fix tests
2016-07-24 09:20:54 -04:00
a9b29d5088
Merge branch 'master' of github.com:jamesagnew/hapi-fhir
2016-07-23 18:51:08 -04:00
350e82b6cf
Fix #403 - Allow references to keep versions when encoding
2016-07-23 18:48:00 -04:00
748c13d0dc
Remove bad dependency
2016-07-22 18:33:16 -04:00
7bea8431f7
Add interceptor for rejecting TRACE and other invalid verbs
2016-07-19 19:16:09 -04:00
5073692eda
Always include SUBSETTED tag when _elements is used on server
2016-07-18 07:05:11 -04:00
196c11bfa2
Use new style mimetypes but keep supportuing the old ones as well
2016-07-17 18:35:06 -04:00
ef1c81e241
Fix #150 - Don't encode null fluent client values
2016-07-14 07:18:48 -04:00
0b69367b11
Merge branch 'master' of github.com:jamesagnew/hapi-fhir
2016-07-13 09:22:19 -04:00
5b46e9655a
Fix compile errors
2016-07-13 07:59:08 -04:00
fa37afb61f
Merge branch 'master' of github.com:jamesagnew/hapi-fhir
2016-07-12 21:44:52 -04:00
ed941a116b
Update to use GSON
2016-07-12 21:44:40 -04:00
c550681aeb
Update defs to 1.5.0 versions
2016-07-12 18:29:10 -04:00
c3e9f618eb
Version bump to 2.0-SNAPSHOT
2016-07-12 11:12:07 -04:00
acaf2135c5
Finalize 1.6 release
2016-07-06 07:29:20 -04:00
74feb38085
Fix test regression
2016-07-05 17:30:14 -04:00
d63e289cbe
Validation fixes
2016-07-05 16:56:06 -04:00
9226e43090
Fix tests
2016-07-05 09:57:55 -04:00
a8585c881d
Fix #396 - Make tests timezone independent
2016-07-04 13:48:05 -04:00
32bdd14639
Work on term service
2016-07-02 17:14:36 -04:00
Sebastien Riviere
James
michael.i.calderero
christian ohr
Ben Spencer
sekaijin
Michael Lawley