Commit Graph

976 Commits

Author SHA1 Message Date
Grahame Grieve 6ecf1c8f99 Fix issues with reloading package once already loaded in validator + add test case 2020-08-12 05:11:35 +10:00
Grahame Grieve 7f79342447
Merge pull request #298 from hapifhir/gg-v3-parser-test
Add test case for Json resource parsing
2020-08-11 12:42:27 +10:00
markiantorno 5fba875d8b Fix for failing ActivityDefinition-referralPrimaryCareMentalHealth.json test 2020-08-10 21:57:55 -04:00
Grahame Grieve 20a7682c96 Add support for bundle profile parameter 2020-08-11 06:40:11 +10:00
Grahame Grieve 83dc198dd1 enforce case consistency when loading test cases directly 2020-08-11 06:39:28 +10:00
Grahame Grieve 1555849e9a updates to PR 2020-08-11 05:44:13 +10:00
Grahame Grieve f8b4d73f8b prevent NPE loading old packages 2020-08-10 15:55:32 +10:00
Grahame Grieve b6b810ce29 fix for all packages release with wrong urls 2020-08-10 15:54:40 +10:00
Grahame Grieve f73147523a
Gg v5.0.20 work (#294)
* ongoing work around connection problems with tx.fhir.org

* fix for bug processing CCDA constraints (logical model constraints)

* fix for bug loading Measures from packages

* fix NPEs loading invalid packages

* Start Working on i18n for Rendering + Fix case bug rendering bundles and parameters

* Fix for problem with expansion code checking and incomplete value sets

* release notes
2020-08-06 10:51:05 -04:00
Mark Iantorno aa982232ce
I had the code written already, so let's put it in. (#293)
* I had the code written already, so let's put it in.

* renaming and moving Utilities tests class to conform to best practices.
2020-08-06 07:28:17 -04:00
Grahame Grieve 1e7eb4aa1b Work around IPS path issues 2020-08-06 07:38:54 +10:00
Grahame Grieve c70c43271a fix questionnaire rendering to create valid resources 2020-08-06 07:38:20 +10:00
Grahame Grieve 6bdde22026 no validation for CanonicalResource.url (further work needed) 2020-08-03 18:16:00 +10:00
Grahame Grieve 5299bbe16b * better validation of external references. Note: this is a potentially significant change: things that were called ok before may not be now, and things that were not ok before may become so, depending on the interplay between this and auto-load, further work may be needed here
* Support better validation of version specific profiles in meta.profile. This may also find new errors that were not previously being found
* Support auto-determination of the version of FHIR to use when using the java validator
* auto-load packages from the package server when references to profiles etc are encountered
* look for references inside other parameters in Parameters resource
2020-08-03 17:40:21 +10:00
Grahame Grieve 1888925293 upgrade version of pubpack 2020-07-31 12:52:02 +10:00
Grahame Grieve eee552cdde Fix errors in StructureDefinition validation 2020-07-30 12:03:34 +10:00
Grahame Grieve 78dd110814 fix cqfmeasures url 2020-07-28 12:45:33 +10:00
Grahame Grieve a41956e57c improve error message 2020-07-27 22:39:41 +10:00
Grahame Grieve efa72d367f rework error handling when expanding valuesets + add error check on value set imports 2020-07-27 13:08:39 +10:00
Grahame Grieve 04aef18307 utils support 2020-07-25 08:40:37 +10:00
Grahame Grieve 115fa8a497 add automatic loading of package dependencies by the context 2020-07-25 08:38:13 +10:00
Grahame Grieve 88ea3f45b4 add package url fixer 2020-07-22 12:27:24 +10:00
Grahame Grieve f6c7d294c4 fix problem validating search parameter derivation 2020-07-22 08:10:12 +10:00
Grahame Grieve 701ac1b560 fix bug when canonical resource has no URL 2020-07-22 06:59:53 +10:00
Grahame Grieve 6421226011 more improvements around lazy loading 2020-07-21 17:14:08 +10:00
Grahame Grieve c53db20879 Merge branch 'master' of https://github.com/hapifhir/org.hl7.fhir.core 2020-07-20 22:58:16 +10:00
Grahame Grieve 52267118c6 implement lazy loading - improve loading times and memory requirements in advance of the challenge of loading UTG for most use cases 2020-07-20 22:57:15 +10:00
Keith Carlson Jr 77c1890ad2
adding case for when c:\temp does not exist on windows machine (#278) 2020-07-17 15:00:10 -04:00
Grahame Grieve 9bbe5ab5c8 improve rendering of contained resources 2020-07-17 13:42:44 +10:00
Grahame Grieve f3b1f16f39 add test for pubpack - make sure that it is working 2020-07-17 09:30:58 +10:00
Grahame Grieve 70b3cb73cf new errors for html checking 2020-07-17 09:30:03 +10:00
Grahame Grieve 847858c131 Add parsing DTD entity declarations 2020-07-17 09:26:54 +10:00
Grahame Grieve 4dc78b5b3c add support for table row opacity 2020-07-16 09:19:40 +10:00
Grahame Grieve 9ccb37a0ba fix issues in MeasureReport validation 2020-07-15 16:45:21 +10:00
Grahame Grieve fa7de3a308 more FHIRPath engine into i18n framework 2020-07-14 08:16:56 +10:00
Grahame Grieve ce47093c12
Gg work (#267)
* fix for new test case about profiles restricting types

* update release notes

* fix NPEs doing ProfileComparison

* fix non-translated messages in InstanceValidator

* Fix validation issues

* update to 1.1.22 tests

* fix bug finding children in getChildList when element is a reference to another element

* fixes to QuestionnaireRenderer + add QuestionnaireResponseRenderer

* Add more informative error when no type parser provided

* fix bug where current/dev builds do not properly update the cache

* improve test error message

* set up release notes

* fix bug with CDA snapshot generation

* fix bug in type checking code

* Add support for validating against ImplementationGuide.global

* Fix bug in QuestionnaireResponse rendering

* update tests dependency

* ping build

* Add additional StructureDefinition validation

* update release notes

* fix npe rendering diagnostic reports without subjects

* don't add note on untranslatable messages

* check existing snapshots (preliminary)

* add signpost message tracking

* start working on profile generating bug

* Fix bug in snapshot - not handling case where content is sliced, base slicing detail is provided, and max slices = 1

* fix release notes
2020-07-06 20:21:40 -04:00
Grahame Grieve 92c02d2294
Add support for validating against ImplementationGuide.global (#266)
* fix for new test case about profiles restricting types

* update release notes

* fix NPEs doing ProfileComparison

* fix non-translated messages in InstanceValidator

* Fix validation issues

* update to 1.1.22 tests

* fix bug finding children in getChildList when element is a reference to another element

* fixes to QuestionnaireRenderer + add QuestionnaireResponseRenderer

* Add more informative error when no type parser provided

* fix bug where current/dev builds do not properly update the cache

* improve test error message

* set up release notes

* fix bug with CDA snapshot generation

* fix bug in type checking code

* Add support for validating against ImplementationGuide.global

* Fix bug in QuestionnaireResponse rendering

* update tests dependency

* ping build

* Add additional StructureDefinition validation

* update release notes
2020-07-03 18:25:15 -04:00
Grahame Grieve 9024a309ac
fix various bugs (#265)
* fix for new test case about profiles restricting types

* update release notes

* fix NPEs doing ProfileComparison

* fix non-translated messages in InstanceValidator

* Fix validation issues

* update to 1.1.22 tests

* fix bug finding children in getChildList when element is a reference to another element

* fixes to QuestionnaireRenderer + add QuestionnaireResponseRenderer

* Add more informative error when no type parser provided

* fix bug where current/dev builds do not properly update the cache

* improve test error message

* set up release notes
2020-06-30 20:25:38 -04:00
Grahame Grieve b08c12f2c4
update test case dependency to 1.1.22 (#263)
* fix for new test case about profiles restricting types

* update release notes

* fix NPEs doing ProfileComparison

* fix non-translated messages in InstanceValidator

* Fix validation issues

* update to 1.1.22 tests
2020-06-26 20:07:30 -04:00
Grahame Grieve 03a4224424
fix for new test case about profiles restricting types (#261)
* fix for new test case about profiles restricting types

* update release notes

* fix NPEs doing ProfileComparison

* fix non-translated messages in InstanceValidator
2020-06-26 14:46:54 -04:00
Grahame Grieve c6e424d50d Merge branch 'master' of https://github.com/hapifhir/org.hl7.fhir.core into gg-work 2020-06-26 06:05:25 +10:00
Grahame Grieve 44d7a59115 Add value set validation 2020-06-25 17:10:24 +10:00
Grahame Grieve 9dd0e06d9c fix error message for unknown package 2020-06-25 17:10:06 +10:00
Grahame Grieve e1e994704d More stability on tests + fix questionnaire renderer problem + add SearchParameter derivation validation 2020-06-25 11:24:03 +10:00
Grahame Grieve 0c7cde13e2 fix default value for warnAboutMissingMessages 2020-06-25 09:17:57 +10:00
Mark Iantorno 7bbbd7af0a
Gpg profile (#258)
* removing old pipeline files

* adding gpg profile
2020-06-24 17:27:14 -04:00
Grahame Grieve c2c10872e1 Allow to suppress the warning message about unknown messages from translation layer 2020-06-24 15:06:27 +10:00
Grahame Grieve 0e8b5f6552
various fixes for reported bugs (#252)
* fix bug in Definition mode - support ofType()

* fix bug reading old packages

* fix for invalid OperationOutome if nothing is wrong

* more fix for when no errors found
2020-06-19 16:02:56 -04:00
Grahame Grieve 8ed7b89dde Merge branch 'master' of https://github.com/hapifhir/org.hl7.fhir.core into gg-work 2020-06-20 05:47:04 +10:00
Mark Iantorno c1f5244873
Adding more verbose output for bad file path validator input (#249)
* Adding more verbose output for bad file path validator input

* Moving error output to i18n tooling. Adding tests to tooling, and addressing some issues with i18n implementation.

* Apparently the intended behavior is to not tell the user if they are localizing a string that doesn't exist.
2020-06-19 09:28:36 -04:00
Grahame Grieve 2139a54a87 fix for invalid OperationOutome if nothing is wrong 2020-06-19 11:29:54 +10:00
Grahame Grieve 07f842bffe fix bug reading old packages 2020-06-18 18:19:11 +10:00
Grahame Grieve 2128128072 Improve error message associated with slicing failure 2020-06-12 09:36:12 +10:00
Grahame Grieve 3e55b24473
Merge pull request #237 from hapifhir/gg-work
override Element extension methods to also check for modifierExtensions
2020-06-11 21:58:20 +10:00
Grahame Grieve 5f1d6e193c first release of functional Profile comparison on new framework 2020-06-11 16:40:57 +10:00
Oliver Egger ebc2a7a6ba don't escape umlaut in elem utf8 2020-06-10 19:50:52 +02:00
Grahame Grieve c26b331850 more work on profile comparison 2020-06-09 17:22:37 +10:00
Grahame Grieve 6b7aa93dc7 fix bug in XML parser for Validator 2020-06-09 17:20:35 +10:00
Grahame Grieve 17fb1462c4 fix Attachment check, and add Validator Security checks 2020-06-09 17:19:06 +10:00
Grahame Grieve 94467b270a standardise terminology client across versions 2020-06-07 08:42:14 +10:00
Grahame Grieve 79ac6dc7b8 fix for issue #187 2020-06-06 07:19:34 +10:00
Grahame Grieve b3c8cae61d Issue #189 - improve Questionnaire error message 2020-06-06 07:17:12 +10:00
Grahame Grieve fcc18a0e39
Merge pull request #214 from hapifhir/ja_20200524_npm_rework
Refactor package support to remove filesystem dependency
2020-06-04 16:04:02 +10:00
Grahame Grieve a6b924220c Change the way local test file short cut works 2020-06-04 05:03:19 +10:00
Grahame Grieve 861a0ee706 change error to warning for extension frrom different version because context might change between versions 2020-06-03 16:03:14 +10:00
jamesagnew 20fab5e047 Rework package generator 2020-06-02 18:16:08 -04:00
jamesagnew 6534a5358b Merge branch 'master' into ja_20200524_npm_rework 2020-06-02 18:02:51 -04:00
jamesagnew 56d933199c A bit of package rework 2020-06-02 18:02:25 -04:00
Grahame Grieve 7ac1b1f0e0 implement new FHIRPath functions 2020-06-03 06:52:47 +10:00
markiantorno b8a4f6ae4f putting back in check for WINDOWS os for sdc test case. I know this isn't ideal, but this will get the tests back to a passing state, and we canmake changes with the CI running 2020-06-02 11:25:59 -04:00
markiantorno 8aee1e2e6b Adding back in local file read 2020-06-02 09:40:33 -04:00
markiantorno 8a7737cac0 Merge branch 'master' of https://github.com/hapifhir/org.hl7.fhir.core into utilities_test_cases 2020-06-02 09:28:28 -04:00
jamesagnew 0d8cab0b6e A bit more rework 2020-06-02 07:45:54 -04:00
Grahame Grieve 314ca0c35c Merge branch 'master' of https://github.com/hapifhir/org.hl7.fhir.core 2020-06-02 13:52:41 +10:00
Grahame Grieve f1d901a842 Support for rendering contained resources in IG Publisher 2020-06-02 13:52:28 +10:00
markiantorno 06b2cac048 fixing tests to run on CI 2020-06-01 15:26:26 -04:00
markiantorno c17fb9b6b2 wip 2020-06-01 11:53:44 -04:00
markiantorno ea7b9de3c5 tmp directory doesn't exist on unix based machines by default. I modified the ComparisonTests to create the test file and contained directories if that file doesn't already exist so that tests will now pass again 2020-06-01 10:10:24 -04:00
jamesagnew 17411a3659 Merge branch 'master' into ja_20200524_npm_rework 2020-05-30 12:07:17 -04:00
jamesagnew 223ac04238 Merge branch 'ja_20200524_npm_rework' of github.com:hapifhir/org.hl7.fhir.core into ja_20200524_npm_rework 2020-05-30 11:08:42 -04:00
jamesagnew 9fe0688ee5 Work on rework 2020-05-30 11:08:33 -04:00
Grahame Grieve 13091bbecd ping build 2020-05-30 12:42:45 +10:00
Grahame Grieve 4af4925657 move turtle parser + tests to Utilities 2020-05-30 09:38:48 +10:00
jamesagnew 91e2d227fb Compile fixes 2020-05-28 21:07:18 -04:00
Grahame Grieve 0f0d19cd94 Add checks for illegal constratins on elements 2020-05-28 22:55:35 +10:00
Grahame Grieve f64d5c7fd5 fix problem with rendering confusion between paths around local and base specifications 2020-05-28 14:08:30 +10:00
jamesagnew c0f6366626 NPM rework 2020-05-27 05:27:44 -04:00
Grahame Grieve 998d1e0afc Release new version 5.0.4 2020-05-27 11:06:30 +10:00
Grahame Grieve c66bfec06b update dependency on pubpack 2020-05-27 09:28:55 +10:00
Grahame Grieve 4ee25ee1d0 remove spurious debugging code 2020-05-27 08:34:28 +10:00
Grahame Grieve d7788c7945 fix bug loading packages 2020-05-27 08:34:02 +10:00
Grahame Grieve 70c75fde62 fix problem with package cache corruption when different processes install the same package at the same time 2020-05-27 07:08:36 +10:00
Grahame Grieve ccb6b067b3 Release new version 5.0.3 2020-05-26 06:15:36 +10:00
jamesagnew 37f6a6ed8c Package manager 2020-05-24 18:26:03 -04:00
jamesagnew 444b612805 Start reworking NPM manager 2020-05-24 15:02:37 -04:00
Grahame Grieve ad82386a9c More questionnaire rendering improvements 2020-05-23 08:16:03 +10:00
Grahame Grieve 786aa001c5 fix misleading error message + uppate for new release of tests 2020-05-22 08:17:36 +10:00
Grahame Grieve 130caef348 Add support for Attachment validation + max size and max decimal places validation 2020-05-21 13:22:21 +10:00
Grahame Grieve e2c955a8f4 fix bug generating tables - cells with only imgs that are refs - and add convenience methods 2020-05-20 18:48:01 +10:00
Grahame Grieve 12b0046ebc get current core pacakge from current build 2020-05-18 06:21:13 +10:00
Grahame Grieve 58fe151f79 fix message about missing date 2020-05-18 06:19:12 +10:00
Grahame Grieve 14d0c126e1 Package validator 2020-05-13 19:51:32 +10:00
Grahame Grieve d688f9254d * fix fatal NPE validating bundles when resource is missing
* fix tests for R5 changes
2020-05-13 09:45:29 +10:00
Grahame Grieve 463a557402 Release new version 4.2.30 2020-05-12 11:54:28 +10:00
Grahame Grieve edea997312 Clean up license 2020-05-12 08:55:27 +10:00
Grahame Grieve 5f74bea327 move tests & do new release 2020-05-10 09:18:54 +10:00
Grahame Grieve d203b17c7d update to use new secondary package server 2020-05-10 08:15:40 +10:00
Grahame Grieve 3afd2a9c32 Merge branch 'master' of https://github.com/hapifhir/org.hl7.fhir.core 2020-05-08 12:01:08 +10:00
Grahame Grieve eb9de04d2d Start building conformance resource comparison code 2020-05-08 11:58:02 +10:00
markiantorno ef660d59db Merge branch 'master' of https://github.com/hapifhir/org.hl7.fhir.core into azure_pipelines_setup 2020-05-06 11:26:36 -04:00
Grahame Grieve 17ef340972 Release new version 4.2.25 2020-05-06 11:16:01 +10:00
markiantorno 7a8f84fc6c cleaning up port addresses for gui tests 2020-05-02 10:00:03 -04:00
Grahame Grieve 4245839a69 Release new version 4.2.25 2020-05-02 11:15:32 +10:00
Grahame Grieve 868fbb5f95 Release new version 4.2.25 2020-05-02 10:53:58 +10:00
Grahame Grieve d5bb555151 fix for issue #188 + fix for transition of ConceptMap enumeration 2020-05-02 06:56:29 +10:00
markiantorno 89f98bb960 I cast you out unclean spirit. 2020-04-29 16:55:40 -04:00
Grahame Grieve a2b1f1125f fix typo 2020-04-29 14:50:02 +10:00
Grahame Grieve d5fff86e8e get all tests passing. 2020-04-28 11:14:54 +10:00
Grahame Grieve 34e4da4f39 fix bug in data: generator 2020-04-27 14:26:52 +10:00
Grahame Grieve 2e759604c1 cache immutable downloads locally 2020-04-26 15:16:00 +10:00
Grahame Grieve c829de2f86
Merge branch 'master' into testing_updates 2020-04-24 07:20:35 +10:00
markiantorno 7673400a13 Merge branch 'master' of https://github.com/hapifhir/org.hl7.fhir.core into testing_updates 2020-04-23 10:51:49 -04:00
markiantorno 9c83540c2f Merge branch 'master' of https://github.com/hapifhir/org.hl7.fhir.core into validator_gui 2020-04-23 10:47:00 -04:00
Grahame Grieve 4316c81f7e reorganize generation code for terminology resources 2020-04-23 17:31:58 +10:00
Grahame Grieve 4cbf328e54 support validation against code system fragments 2020-04-22 16:43:32 +10:00
markiantorno 3dc429c56c Merge branch 'master' of https://github.com/hapifhir/org.hl7.fhir.core into fix_for_OS_agnostic_utilities_tests 2020-04-21 11:49:39 -04:00
markiantorno c81922a615 Fixing utilities test so it runs on all OS 2020-04-21 11:47:49 -04:00
Grahame Grieve d6f267781f fix error in Accept header fetching packages 2020-04-21 13:56:09 +10:00
Grahame Grieve ec517834b0 Merge branch 'master' of https://github.com/hapifhir/org.hl7.fhir.core 2020-04-17 10:58:54 +10:00
Grahame Grieve 4d30314a3d Improve URL validation + fix NPE in Measure validation 2020-04-17 10:58:06 +10:00
Grahame Grieve 549abaa799 more informative error message for package failure 2020-04-17 10:56:20 +10:00
markiantorno d3733b3409 Merge branch 'master' of https://github.com/hapifhir/org.hl7.fhir.core into validator_gui 2020-04-16 20:28:25 -04:00
markiantorno 8c3e03399e wip 2020-04-16 10:17:33 -04:00
John Grimes 952e6c6e6b Make XhtmlNode$Location serializable
Addresses jamesagnew/hapi-fhir#1422.
2020-04-12 11:38:29 +10:00
Grahame Grieve fa9c1cae1d bug fixes for list narrative generation 2020-04-12 08:22:29 +10:00
Grahame Grieve c08bbc02e4 Improved rendering of filtered messages and group messages by type in qa.html 2020-04-11 19:29:52 +10:00
Grahame Grieve 8431a12195 Pass too-costly note on when including value sets + Improve rendering of value set version dependencies 2020-04-11 19:28:12 +10:00
Grahame Grieve a261ad0f75 improve error message for randon text in xml format 2020-04-09 10:28:08 +10:00
Grahame Grieve f1594bc133 beef up the Context interface to support package related tracking, and use that to manage UTG resource contention 2020-04-09 10:26:39 +10:00
Grahame Grieve 35074ca0b2 fix bug in ConceptMap rendering for unmapped codes 2020-04-07 14:49:55 +10:00
Grahame Grieve b179c482e7 complete CQL based Measure Validation 2020-04-07 07:27:59 +10:00
Grahame Grieve 971b59b7af fix more bugs in CSV reader 2020-04-07 07:27:19 +10:00
Grahame Grieve 210cc0affc alias id() for Npmpackage.name() 2020-04-06 11:26:24 +10:00
Grahame Grieve 3e49000188 fix bug in CSV reader (read past end of line) 2020-04-06 10:11:00 +10:00
Grahame Grieve 42461e6162 Add resource type to messages for clarity + fix typos in messages 2020-04-05 20:35:22 +10:00
Grahame Grieve a3be26f356 Add loadByCanonical to NpmPackage 2020-04-05 20:34:18 +10:00
Grahame Grieve 101fbe3126 more work on Measure/MeasureReport validation 2020-04-03 12:16:33 +11:00
Grahame Grieve ab581fdf86 further modularise validator and add Measure Validation 2020-04-02 11:05:55 +11:00
Grahame Grieve 1da57be1c0 support comments in json source when configured to do so 2020-04-02 11:00:42 +11:00
Grahame Grieve 753d3bd971 fix problems fetching packages 2020-03-31 10:15:49 +11:00
Grahame Grieve 232f1ff8ff Start building support for measure validation 2020-03-31 10:14:12 +11:00
Grahame Grieve 1ad34c7a50 delete package if it's half installed 2020-03-28 06:10:02 +11:00
Grahame Grieve ac72dff882 More validation of URL charaters in XHTML ```a``` and ```img``` 2020-03-26 06:47:53 +11:00
Grahame Grieve af97232036 Merge branch 'master' of https://github.com/hapifhir/org.hl7.fhir.core 2020-03-19 06:23:13 +11:00
Grahame Grieve a7cf428fef Validate XML header and syntax issues 2020-03-19 06:17:03 +11:00
jamesagnew c2e4e38c0b Fix typo in message 2020-03-17 08:21:35 -04:00
Grahame Grieve c46d4dd779 fix bugs around XML version + add ICD-11 generator 2020-03-17 11:10:50 +11:00
patrick-werner 5f7a6efe60 NPE fix 2020-03-13 19:24:55 +01:00
patrick-werner fe4b4acc3f Merge branch 'i18nUtilities' into i18n_fixes 2020-03-13 18:45:26 +01:00
patrick-werner a44d1c3582 added german translations for new properties
removed unused property, added html message part as property in InstanceValidator
minor fixes
2020-03-13 18:45:12 +01:00
patrick-werner 109b80ed6f start movin i18n code Contexts -> utilities 2020-03-13 09:53:59 +01:00
patrick-werner df8682428a readding all the i18n work 2020-03-13 08:49:05 +01:00
Grahame Grieve 1757e27caf check version before checking cache if no version specified when loading a package 2020-03-13 12:57:24 +11:00
Grahame Grieve f5434bab0d add missing constant 2020-03-13 12:54:11 +11:00
patrick-werner 86711ac16f readding all the i18n work 2020-03-12 23:26:05 +01:00
Grahame Grieve 65fd77ed76 Fix version issue in validation engine + handle loading latest version of a package 2020-03-03 21:27:37 +11:00
Grahame Grieve 657d61dd7e
Merge pull request #147 from ahdis/oliveregger_who_at_curl
adjust atc who url
2020-03-03 08:40:24 +11:00
Grahame Grieve bab1fe063d Merge branch 'master' of https://github.com/hapifhir/org.hl7.fhir.core 2020-03-03 07:42:05 +11:00
Grahame Grieve d6018f26c8 fix minor bugs loading packages 2020-03-03 07:38:52 +11:00
Oliver Egger 3684fbb8c9 adjust atc who url 2020-03-02 18:40:13 +01:00
James Agnew 9178945241 Correct copy-paste error in ValidationOptions 2020-03-01 21:38:36 -05:00
Grahame Grieve f5e2d3405d Add convenience write methods 2020-03-02 09:02:52 +11:00
Grahame Grieve 7f4a0f60fc Allow "-" in package names + fix bug scanning root folder 2020-03-02 09:02:02 +11:00
Grahame Grieve 2edc09d297 calculate URL when possible 2020-02-25 08:10:57 +11:00
Grahame Grieve 99a266b0d6 fix bug with template inheritance 2020-02-24 16:06:28 +11:00
Grahame Grieve da2a59cf1a fix package subsystem for challenge with hl7.fhir.au.base setup 2020-02-22 08:01:01 +11:00
Grahame Grieve 550aeffb9a handle null when reading JsonString 2020-02-22 07:59:42 +11:00
Grahame Grieve af850879fd Fix cibuild url lookup issue 2020-02-20 09:20:47 +11:00
Grahame Grieve 3f10fc3430 quality work inside NpmPackage loader 2020-02-20 09:20:11 +11:00
Grahame Grieve fe1afa7b4c Release new version 4.2.1 2020-02-19 12:06:21 +11:00
Grahame Grieve d535bbaacb Use packages.fhir.org 2020-02-18 14:31:09 +11:00
Grahame Grieve 6589d87ac0 utility enhancements for template version release process 2020-02-17 22:29:09 +11:00
Grahame Grieve f4197bde87 Fix problem loading xml:lang when using xpp to parser xhtml 2020-02-14 10:08:25 +11:00
Grahame Grieve 582a2699a5 Add PackageServer Client and tests 2020-02-12 17:53:28 +11:00
Grahame Grieve 6ea5016da5 fix JsonUtils to handle null 2020-02-12 17:45:32 +11:00
Grahame Grieve 4708fcb49e add support for file: in package version (per NPM spec) 2020-02-09 08:14:30 +11:00
Grahame Grieve 398dbb003c fix IHE template 2020-02-07 12:10:32 +11:00
Grahame Grieve c0976dd365 add support for [user] in path 2020-02-07 10:30:17 +11:00
Grahame Grieve b95a05045e Improve error message when package can't be accessed 2020-02-07 10:29:16 +11:00
Grahame Grieve df9e11c40a fix bug in validator on search params with no references + fix bug in cache manager on github urls 2020-02-02 22:52:43 +11:00
Grahame Grieve 5d1cf89db5 add more package maintenance features 2020-01-31 08:19:51 +11:00
Grahame Grieve c7f3a47ec9 better rendering of slicing logic 2020-01-30 11:05:54 +11:00
Grahame Grieve 1c3061dbf7 track slice validation for users to resolve slicing issues 2020-01-29 13:39:49 +11:00
Grahame Grieve 377aaed23c Merge branch 'master' of https://github.com/hapifhir/org.hl7.fhir.core 2020-01-11 06:25:03 +11:00
Grahame Grieve f7613cacb9 fix R5 package handling 2020-01-11 06:24:30 +11:00
Grahame Grieve ef085a847e fix how CodeableConcept is validated, and add Tx interaction logging by validator 2020-01-11 06:22:16 +11:00
James Agnew cf82025c0d Correctly handle narratives where the XHTML namespace is bound to a dumb
prefix
2020-01-07 13:36:33 -05:00
James Agnew 746e249346 Don't preserve XML instruction declarations inside JSON narrative blocks 2020-01-07 10:59:30 -05:00
James Agnew d3cf93cf04 Work on https://github.com/jamesagnew/hapi-fhir/issues/1658 - Make sure
we preserve lang attribute on narrative div
2020-01-07 09:53:43 -05:00
Grahame Grieve 094b73af04 4.2.0 release 2019-12-31 14:31:28 +11:00
Grahame Grieve 91cf756386 fix bugs in v1.4 validation 2019-12-30 10:25:05 +11:00
Grahame Grieve 5e27541288 rebuild R5 generated code for changes to abstract types. 2019-12-30 10:24:14 +11:00
Grahame Grieve 6e0df466f7 fix SimpleDateFormat to not be locale dependent 2019-12-19 22:39:46 +11:00
Grahame Grieve c5c4059ed4 fix problem parsing dates 2019-12-19 12:58:32 +11:00
Grahame Grieve 8d2da0b701 fix broken links in IGs 2019-12-19 10:50:54 +11:00
Grahame Grieve 52eebdb56e support for xver extension package 2019-12-19 10:48:16 +11:00
Grahame Grieve b99e667dd6 get active tables working 2019-12-16 07:26:47 +11:00
Grahame Grieve 415193a792 Start working on active tables, fix testing bug 2019-12-14 07:54:48 +11:00
Grahame Grieve ba4628eb28 fix OID translation case 2019-12-13 22:05:49 +11:00
Grahame Grieve 674432a8ad Release new version 2019-12-13 11:29:49 +11:00
Grahame Grieve 4287b1ae68 fix NPE in IG publisher 2019-12-13 09:25:07 +11:00
Grahame Grieve ea7f3a7957 refactor validation options, and improve codeableConcept validation, and improve code system rendering 2019-12-12 10:33:22 +11:00
Grahame Grieve be2867e68a fix bug loading npm package for template 2019-12-11 18:11:43 +11:00
Grahame Grieve 1d751a4c75 add describeDuration 2019-12-09 17:32:52 +11:00
Grahame Grieve 4aeb9f0bcc fix up version display on validator 2019-12-09 17:29:12 +11:00
Grahame Grieve c62848a886 fix bug with NpmPackage ignoring files in root of package 2019-12-07 06:55:30 +11:00
Grahame Grieve 0cbb586dd1 add support for integer64 2019-12-07 06:54:16 +11:00
Grahame Grieve f4011e96ad fix bug unpacking files 2019-12-06 08:55:30 +11:00
Grahame Grieve 8b0266e23b fix bug in NpmPackage 2019-12-06 07:45:19 +11:00
Grahame Grieve 0894226f52 more debugging 2019-12-05 17:43:55 +11:00
Grahame Grieve f008d6050f Add debugging code 2019-12-05 16:59:09 +11:00
Grahame Grieve ea06dacda7 more packaging fixes 2019-12-05 12:31:25 +11:00
Grahame Grieve 364e47beec fix NpmPackage to handle nested diretories and files in the root directory 2019-12-05 11:44:02 +11:00
Grahame Grieve cc66ce9f34 fix bug finding example resource 2019-12-05 07:44:53 +11:00
Grahame Grieve 73f4b9f507 fix bugs downloading packages 2019-12-05 05:09:48 +11:00
Grahame Grieve 5c9729123a rework NPM cache manager 2019-12-05 04:13:39 +11:00
Grahame Grieve 4f048776ba add more log statements 2019-12-04 11:10:52 +11:00
Grahame Grieve 6115cd21b6 fix snapshot generation for new tests 2019-12-03 12:31:55 +11:00
Grahame Grieve fe9dc1919b Release new version 2019-11-29 18:14:33 +11:00
Grahame Grieve 60703efdd4 updates for packages changes 2019-11-26 18:56:52 +11:00
Grahame Grieve f08e903fbc
Merge pull request #109 from lmckenzi/Enable_appending_in_packages
Enable packages containing instructions to append files
2019-11-21 20:17:19 +13:00
Lloyd McKenzie 57b6027431 Enable packages containing instructions to append files 2019-11-20 23:27:01 +01:00
Grahame Grieve f9c8b65083 package name / version validation 2019-11-20 20:44:33 +11:00
Grahame Grieve 9531c6f901 improve error messages from cache 2019-11-19 19:52:13 +11:00
Grahame Grieve 2221590d4d Improve error message, and add more tests 2019-11-19 14:39:29 +11:00
Grahame Grieve 3d24088171
Merge pull request #99 from ahdis/oliveregger_cdanarrative_xhtmlnsfordiv
add xhtml namespace to div for CDA section narrative
2019-11-19 08:47:55 +13:00
Grahame Grieve 24acb2e3ed
Merge pull request #102 from ahdis/oliveregger_cdastylecodetoxhtml
CDA styleCode to xhtml conversion
2019-11-19 08:44:29 +13:00
Grahame Grieve d1b95a60cb
Merge pull request #108 from ahdis/oliveregger_cda_narrative_tfoot
cda narrative support tfoot
2019-11-19 08:38:33 +13:00
Grahame Grieve 0dfc060665 fix bug in NpmPackage loader 2019-11-19 06:37:18 +11:00
Grahame Grieve e5986a31fb fix to package infrastructure 2019-11-17 19:07:16 +11:00
Grahame Grieve 8ce2a8f760 more package quality work 2019-11-17 03:11:34 +11:00
Oliver Egger 4a05ed8e48 cda narrative support tfoot 2019-11-13 23:54:28 +01:00
Grahame Grieve 62815fe2b5 More work on package processing robustness 2019-11-13 09:41:54 +11:00
Grahame Grieve 3de429ae6a Release new version 2019-11-13 07:49:12 +11:00
Grahame Grieve 5b042f76a1 Add debugging 2019-11-13 07:14:11 +11:00
Grahame Grieve 4b173cbfb3 check in new resource manager 2019-11-12 19:40:42 +11:00
Grahame Grieve 5fe2552a08 fix version bug generating snapshot 2019-11-12 09:07:54 +11:00
Oliver Egger dab4c084a8 CDA styleCode to xhtml conversion 2019-11-11 14:51:32 +01:00
Grahame Grieve e45aae4867 fix package dependency loading bug + package saving bug 2019-11-12 00:17:07 +11:00
Oliver Egger 4dde732718 add xhtml ns to div 2019-11-11 13:54:22 +01:00
Grahame Grieve 52b80cf71c load dependency Packages, and load content from URL correctly 2019-11-11 14:20:52 +11:00
Grahame Grieve 1d193e7c87 rework version loading when validating 2019-11-10 21:07:34 +11:00
Grahame Grieve 3ae115c62d support for legacy simplifier packages 2019-11-10 21:04:21 +11:00
Grahame Grieve 0fcb97aa2f validation documentation improvements, and batch loading 2019-11-09 07:54:16 +11:00
Grahame Grieve 02791ae21f update MIMIC code and reverse testing change (maven said no) 2019-11-07 20:57:16 +11:00
Grahame Grieve 7099f904f5 more work on cache management 2019-11-07 12:04:24 +11:00
Grahame Grieve be76704609 add saving packages 2019-11-05 14:53:48 +11:00
Grahame Grieve 399e86300d more version support 2019-11-01 21:18:44 +11:00
Grahame Grieve 52187af17a Fix for R3 and R4 technical corrections and getting IGs publishing and passing (and fix version markers) 2019-11-01 11:21:06 +11:00
Grahame Grieve 888356999e Update to support new packages, new NPM specification 2019-10-31 21:54:10 +11:00
Grahame Grieve efd20a22fe move test cases to fhir-test-cases repository 2019-10-28 18:06:41 +11:00
Grahame Grieve 08eb187b79 Merge branch 'master' of https://github.com/hapifhir/org.hl7.fhir.core 2019-10-28 10:06:02 +11:00
James Agnew 34cf0628d1 Fix https://github.com/jamesagnew/hapi-fhir/issues/1549 - Account for
latest HAPI FHIR API interfaces
2019-10-27 17:44:22 -04:00
Grahame Grieve 9b0324fb98 better error message loading packages 2019-10-25 10:22:45 +11:00
Grahame Grieve 958791d1cd more Mimic work 2019-10-25 08:19:59 +11:00
James Agnew ecfdf43034 Fix https://github.com/jamesagnew/hapi-fhir/issues/1488 - We should not
use HTML encoding on entities when serializing narratives
2019-10-21 11:10:59 -04:00
James Agnew 2f380704de Fix precision and validator issues 2019-10-18 10:47:20 -04:00
Oliver Egger 220a668e68 processRenderMultiMedia add src attribute 2019-10-14 22:36:16 +02:00
Grahame Grieve 85a1256b24 fix issues importing markdown into heirarchical tables 2019-10-02 14:49:57 +10:00
Grahame Grieve 024d6dc935 embed anchors at end of narrative for JSON & XML 2019-09-14 21:42:56 +10:00
Grahame Grieve 7bd5d85611 better error message 2019-09-11 22:22:05 +10:00
James Agnew 215fdae37f Include the wrapper element when writing GraphQL responses 2019-09-06 10:29:31 -04:00
Grahame Grieve 9024eea94a fix bug in cache management 2019-09-06 13:47:55 +10:00
Grahame Grieve 527e8d02b4 manage package currency 2019-09-06 12:11:16 +10:00
Grahame Grieve 34a3dfb43e work on API comparison 2019-08-29 18:11:33 +10:00
Grahame Grieve b80c6e6af6 improvements to profile rendering 2019-08-23 14:54:12 +10:00
James Agnew ecfd55c368 Backport GraphQL support to DSTU3 2019-08-12 10:55:34 -04:00
James Agnew c1728a481d Refactor R4 infrastructure to use the new common
TerminologyServiceOptions, and tweak the validation of enableWhen to
handle a few edge cases correctly.
2019-08-06 18:27:45 -04:00
Grahame Grieve c57f578f03 Move TerminologyServiceOptions to Utilities. 2019-08-06 07:33:48 +10:00
Grahame Grieve ff6ca3f864 finish testing isDecimal 2019-08-05 15:42:34 +10:00
Grahame Grieve 4ffa343395 add -debug parameter to validator, and add additional (failing) validator tests, and update R4 code 2019-08-04 07:34:13 +10:00
Grahame Grieve 7552eb6f73 Fix up processing of error messages 2019-08-02 15:34:56 +10:00
Grahame Grieve bf39445d87 presentation improvements for profiles table view 2019-08-02 10:51:02 +10:00
Grahame Grieve f5b5737398 fix validation tests 2019-07-30 16:50:54 +10:00
Grahame Grieve fe219985b4 fix decimal validation + fix profile slicing validation 2019-07-30 16:22:54 +10:00
Grahame Grieve f9a06ae2b8 fix integer validation issue 2019-07-30 11:40:34 +10:00
Grahame Grieve a0c245dfdc fix IG publication errors 2019-07-30 10:24:47 +10:00
Grahame Grieve bc776064f5 Fix for sparse differentials 2019-07-29 14:10:38 +10:00
Grahame Grieve be4266a41a update snapshot generation tests 2019-07-19 23:19:24 +10:00
James Agnew c470bb21ce Add hasValue() method to XhtmlNode 2019-07-17 18:50:22 -04:00
James Agnew e265477c6e Header updates 2019-07-14 09:27:45 -04:00
James Agnew 0acb99744b
Changes needed to move HAPI FHIR to using this project directly (#61)
* Work on porting HAPI FHIR to core

* Ongoing work on HAPI FHIR merge
2019-07-14 08:55:21 -04:00
Grahame Grieve 881fdc9284 fix bug in csv processor for BOM + search interversion generator 2019-07-11 08:08:22 +10:00
Grahame Grieve f583649f87 fix generation of error locations using FHIRPath or XPath properly 2019-07-05 20:23:58 +10:00
Grahame Grieve 3c8b3ec97c fix sturcture definition rendering issues 2019-06-25 16:27:56 +10:00
Grahame Grieve 3fc19f92bf add to JsonUtil 2019-06-19 14:08:40 +10:00
Grahame Grieve 5e6755e422 fix bug converting search parameters 2019-06-19 06:40:36 +10:00
Grahame Grieve c3a0958c94 issue 34 - npe reading npm without canonical 2019-06-11 07:26:55 +10:00
Grahame Grieve 027104b2b4 HAPI updates and validation message enhancements 2019-06-11 05:05:01 +10:00
Grahame Grieve 2bdd175591 Release new version 2019-06-08 06:19:01 +10:00
Vadim Peretokin 313cd032c7 Handle StructureDefitinition having no 'path' 2019-06-02 15:03:16 +02:00
Grahame Grieve 8b01f1df19 validation chagnes 2019-05-31 10:21:01 +10:00
Grahame Grieve 590a4d48b1 add debugging for terminology cache issue 2019-05-30 13:29:25 +10:00
Grahame Grieve 24b6305b15 more validator tests + release new utilities 2019-05-23 13:39:21 +10:00
Grahame Grieve 50c88dc1c1 Commit merge method 2019-05-21 07:39:01 +10:00
Grahame Grieve 25de65431e add sorting utility method 2019-05-13 13:32:25 +10:00
Grahame Grieve 2d946790d7 generated patterns + improved package cache errors 2019-05-10 00:08:18 +10:00
Grahame Grieve 2ab02e2e0b fix validation problem for current version 2019-04-25 10:13:28 +10:00
Grahame Grieve 9b0d702ba2 updates for ongoing work in IG publisher + Implementation Guide relax codes on .definition.parameter.code 2019-04-24 06:14:26 +10:00
Grahame Grieve 0a96fa9f37 return File from createDirectory 2019-04-16 23:26:08 +10:00
Grahame Grieve 7ae0db763a easier JSON parsing 2019-04-15 21:45:44 +10:00
Grahame Grieve 87b191fc5d more IG maintenance work 2019-04-14 07:59:17 +10:00
Grahame Grieve d3ef2d7624 NPMPackage direct loading, + refactor JSON parser Location 2019-04-10 11:02:06 +10:00
Grahame Grieve c8c815aa44 more debugging for questionnaire validation 2019-03-18 13:29:36 +11:00
Grahame Grieve 5ce917a34c fixes for errors generating IGs 2019-03-14 17:18:15 +11:00
Grahame Grieve 5653da8a27 add test for multiple discriminators, and fix validator 2019-03-05 16:59:04 +11:00
Grahame Grieve 5a1dfba236 Improve error message when running transforms 2019-03-04 13:17:30 +11:00
Grahame Grieve 5691333e98 GF#18121 - fix so relative links in source markdown don't generate broken linke in IGs 2019-03-04 11:53:14 +11:00
Grahame Grieve 445c90ff9a test 2019-02-24 21:31:47 +11:00
James Agnew caf7cea4c6 Get validator CLI working 2019-01-31 15:51:34 -05:00
Grahame Grieve 8a9987b88f rename package cache operations for clarity + new release 2019-02-01 06:11:01 +11:00
Grahame Grieve 364ed14c2a rename package cache operations for clarity + upgrade for version release 2019-02-01 06:09:03 +11:00
James Agnew 0c9fe20522
Get this test working (#4) 2019-01-31 13:41:05 -05:00
James Agnew bd899957b0 Rename the keep files 2019-01-13 16:37:16 -06:00
James Agnew cbde1cf488 Add keeps for empty folders 2019-01-13 16:20:50 -06:00
James Agnew 806ab9fac8 Externalized code now committed 2019-01-13 14:33:14 -06:00