* Fix split logic of canonical into url and version in several places
Removed
- org.hl7.fhir.r4b.renderers.DataRenderer#versionFromCanonical
- org.hl7.fhir.r4b.renderers.DataRenderer#systemFromCanonical
- org.hl7.fhir.r5.renderers.DataRenderer#versionFromCanonical
- org.hl7.fhir.r5.renderers.DataRenderer#systemFromCanonical
The logic of these methods is wrong, the functionality of extracting
the version and the system URL have been swapped.
Therefore, all usages of aforementioned methods were replaced by the
use of org.hl7.fhir.utilities.CanonicalPair. This not only fixes the
problem, but also reduces duplicated functionality.
* Remove dead code from merge
* Fix spacing issues in rendering
* Empty commit, make-pipeline-go
---------
Co-authored-by: Max Bureck <max.bureck@fokus.fraunhofer.de>
## Validator Changes
* Find value sets on tx server if not tx.fhir.org
* Do not send Content-Type header with GET requests for tx servers
* Fix npe validating code system
* Support discriminator by position
* Don't check type characteristics for unknown types
## WHO I18n Project
* Fix typos in phrases, and fix up handling of apostrophes in messages without parameters
* Test and fix for single quote escapes in I18n
* Create and test transifex configuration
## Rendering Changes
* Fix contact rendering to work properly
* Fix issue resolving contained resource rendering DiagnosticReports etc
* Handle case where Contact.value has extensions instead of a string value
* Render Parameterised types
* Fix bug with LOINC Code row showing wrongly in Profile Details view
* Partial implementation of type parameters
* Fixed rendering of actor-specific obligations, added elementIds to obligation narrative rendering
* Corrected ObligationsRenderer to handle multiple actors and multiple codes. Also got obligations with elements to render properly (which means knowing whether you're on a table page or definitions page, what tab you're on, and whether the element for the obligation is in-scope for that tab (so you know whether to hyperlink or not). Had to make links on the tables point to definitions because table anchors are not unique.
## Other code changes
* split out Base.canHavePrimitiveValue() from Base.hasPrimitiveValue()
* Refactor how observation profiles are registered in order to generalise management of extra profiles
* Use validation policy to implement Observation profile rules
* Rework validation policy management in standalone validator
* Try deploying javadoc with SNAPSHOT
* Add utility to unpack the spec.internals file
* v2 in FHIR tests
* Fix bug loading language pack NPMs
***NO_CI***
## Validator Changes
* Find value sets on tx server if not tx.fhir.org
* Do not send Content-Type header with GET requests for tx servers
* Fix npe validating code system
* Support discriminator by position
* Don't check type characteristics for unknown types
## WHO I18n Project
* Fix typos in phrases, and fix up handling of apostrophes in messages without parameters
* Test and fix for single quote escapes in I18n
* Create and test transifex configuration
## Rendering Changes
* Fix contact rendering to work properly
* Fix issue resolving contained resource rendering DiagnosticReports etc
* Handle case where Contact.value has extensions instead of a string value
* Render Parameterised types
* Fix bug with LOINC Code row showing wrongly in Profile Details view
* Partial implementation of type parameters
* Fixed rendering of actor-specific obligations, added elementIds to obligation narrative rendering
* Corrected ObligationsRenderer to handle multiple actors and multiple codes. Also got obligations with elements to render properly (which means knowing whether you're on a table page or definitions page, what tab you're on, and whether the element for the obligation is in-scope for that tab (so you know whether to hyperlink or not). Had to make links on the tables point to definitions because table anchors are not unique.
## Other code changes
* split out Base.canHavePrimitiveValue() from Base.hasPrimitiveValue()
* Refactor how observation profiles are registered in order to generalise management of extra profiles
* Use validation policy to implement Observation profile rules
* Rework validation policy management in standalone validator
* Try deploying javadoc with SNAPSHOT
* Add utility to unpack the spec.internals file
* v2 in FHIR tests
* Fix bug loading language pack NPMs
***NO_CI***
## Validator Changes
* Fix issue validating codes with + in them
* Fix (well, hack) R4 vital signs issue with component units
## WHO I18n Project
* QA on i18n constants - remove spurious entries, add anything missing
* Remove test case for i18n coverage
* Generate properties translation files without blank entries
* Add transifex configuration
* Fix up .po file generation so that POEdit is supported, and remove duplicate constants (#1592)
* Most strings translated to Dutch, unchecked.
* Add utility to infer locale from region code
## Other code changes
* Remove Accept-Charset header
* Fix typos around CODESYSTEM_CONTENT_COMPLETE
***NO_CI***
## Validator Changes
* remove "LOINC 2711-0 Oxygen saturation in Venous blood" from the list in the validator that checks whether an observation is a vital sign
## WHO I18n Project
* fix value set summary line display
* update the source of truth translation files
## Other code changes
* Handle more than one expectation extensions in CapabilityStatement
* Fix NPEs in Liquid renderer
***NO_CI***
## Validator Changes
* Fix bug processing extension with explicit type slicing
* Fix wrong language code from java locale
* Don't accidently hit other terminology servers for code systems handled natively by tx.fhir.org
* Validate Additional Bindings (provisional - usage context is todo)
* Improved system specific checking of value set filters - particularly LOINC and SNOMED CT, and update LOINC validation to the latest understanding of LOINC filters
## WHO I18n Project
* Add importing translations to native resources
* Finish Migrating text phrases to i18n framework
* Fix bugs with loading translations (#1592)
## Security
* Move all network access to go through ManagedWebAccess
* More security documentation
## Other code changes
* Put jurisdiction in npm package.json
* Add testing ontoserver to test suite
* Fix NPE testing Ontoserver
* fix tx tester calling run ok when a filter is applied and tests fail
* Fix name of preferred when rendering AdditionalBindings
* Add AdditionalBinding version conversion in profiles
* Fix SNOWMED spelling
* Fix rendering of multiple imports in value sets
***NO_CI***
## Validator Changes
* Fix bug where some #refs are not resolved to the root of the resource in FHIRPath slicing evaluation
* Fix bug passing wrong type to tx server when using inferSystem
* Fix bug processing version of CodeSystem.supplements incorrectly
* Don't process wrong parent when processing snapshot of element with profiled type that is not reprofiled
* Fix typo in OID message
* Fix handling value set exclude filters
* Allow code system declared properties to be self-referential
## I18n changes
* More comprehensive internationalization phrase coverage reporting on project page
* Move many rendering phrases into i18n framework
## Rendering Changes
* Fix issue with unknown element rendering fixed value for Attachment
* Fix bug calculating value set expansion size for multiple imports
* Fix bug using wrong message for value sets that are too costly to expand
* Fix extension urls not being linked in tree view
* rendering improvements and remove static use of describeSystem
* Fix NPE rendering profile comparisons
* Fix bug where slicing and grouping gets mixed up rendering profile tree
## Other code changes
* Wrap general exception for IWorkerContext (Catch missed exception from HAPI)
* Shim interfaces and classes to support clinical reasoning project updates.
* Fix duplicate txServer getters and setters
* Use extension class on Exception to force try-catch blocks on checkCodeOnServer calls (#1609)
* rework OID handling for better consistency
* handle time outs doing vsac import (starlink obstructions)
***NO_CI***
dotasek
oliveregger
Grahame Grieve
Grahame Grieve
dotasek
Lloyd McKenzie
markiantorno
Vassil Peytchev
Vassil Peytchev
MattCordell