5cfd99f0dc
[MATH-1240] Fix calculation of ksSum in KolmogorovSmirnovTest for zero input.
2015-06-28 11:58:19 +02:00
6d7ee38cee
[MATH-1242] Improve performance of KolmogorovSmirnov two-sample test via monte carlo simulation. Thanks to Otmar Ertl.
2015-06-28 10:45:23 +02:00
471e6b078a
[MATH-1241] Propagate input value to Gamma#digamma and Gamma#trigamma if the input is not a real value to avoid infinite recursion. Thanks to Aleksei Dievskii.
2015-06-24 15:30:35 +02:00
276e22858c
[MATH-1236] Improve performance of calculating the two-sample Kolmogorov-Smirnov test statistic. Thanks to Otmar Ertl.
2015-06-21 19:39:23 +02:00
75c2b24c68
MATH-1231
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Lifted unnecessary type restriction on constructor's "exponent" argument
of "MicrosphereInterpolator" and "MicrosphereInterpolatingFunction".
2015-06-11 23:52:53 +02:00
2990f6caad
Merge branch 'master' of
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https://luc@git-wip-us.apache.org/repos/asf/commons-math.git
Conflicts:
src/changes/changes.xml
2015-06-11 14:09:52 +02:00
8f35fcb8f7
Fixed error message for unknown parameter name in ODE.
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JIRA: MATH-1232
2015-06-11 13:50:04 +02:00
a55ae85447
Merge branch 'master' of https://git-wip-us.apache.org/repos/asf/commons-math
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Conflicts:
src/changes/changes.xml
2015-06-09 20:43:42 +02:00
96eb80efe1
[MATH-1230] Throw a DimensionMismatchException if dimension of constraints and objective function does not match in SimplexSolver.
2015-06-09 20:39:52 +02:00
12ec16006a
Updated to latest plantuml syntax.
2015-06-01 11:01:58 +02:00
5f5937fcc2
Fixed checkstyle warning.
2015-06-01 10:59:59 +02:00
8be87e032a
MATH-1229
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Set initial capacity to input array's size in order to avoid
unnecessary resizing for inputs larger than than the default
capacity.
2015-05-30 19:23:35 +02:00
441687e5a4
Document NPE.
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JIRA: MATH-1116
JIRA: MATH-1224
2015-05-19 13:46:09 +02:00
c44bfe000c
Fixed wrong event detection in case of close events pairs.
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JIRA: MATH-1226
2015-05-19 13:18:32 +02:00
0c0455fd66
Attempt to re-implement the pow function.
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The attempts are motivated by platform-specific failures, which seem to
be platform-specific, and probably due to JIT optimization bugs.
2015-05-17 16:31:12 +02:00
9b6a649f9f
updated ODE userguide documentation.
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JIRA: MATH-1225
2015-05-17 15:07:31 +02:00
15a24dc0fc
Added a fast implementation of IEEEremainder in FastMath.
2015-05-16 14:24:13 +02:00
83c61da2c9
Document NPE. JIRA: MATH-1224.
2015-05-13 12:21:38 -07:00
903f280595
Use Double.isNaN rather than x != x in FastMath.
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Thanks to Benedikt Ritter.
Github: closes #5 .
JIRA: MATH-1222
2015-05-09 22:15:52 +02:00
a675ca7802
Fix test failures for FastMath.pow by preventing JIT branch optimization.
2015-05-07 21:35:50 +02:00
51cb31ef21
Fixed equals/hashcode contract failure for Dfp.
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Thanks to Cyrille Artho.
2015-05-07 16:28:51 +02:00
e4b3ac8597
Fixed wrong splitting of huge number in extended accuracy algorithms.
2015-05-07 15:23:05 +02:00
6571233ed2
Revert "Attempt to circumvent some errors which seem to be platform-dependent."
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This reverts commit c771c0080b
2015-05-04 17:19:59 +02:00
c771c0080b
Attempt to circumvent some errors which seem to be platform-dependent.
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The Jenkins build often fails on code that seems to be perfectly
correct. Failures also do no always happen so they may depend on
platform. There were similar problems a few months ago that were
probably related to JIT bugs.
This fix simply tries to do the same thing as before, but with an
earlier detection of NaN in one case, and by comparing directly the bits
representation in another case, to avoid wrong optimizations.
2015-05-04 13:43:27 +02:00
c8cb752431
Fixed missing javadoc.
2015-05-04 11:01:09 +02:00
b313ae6888
Add userguide example for integer distributions. Fix title in real distribution overview.
2015-05-03 22:41:45 +02:00
613afdb0c3
Converters for univariate and multivariate differentiable functions.
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JIRA: MATH-1143
2015-05-03 19:18:09 +02:00
cb21480cb1
[MATH-964] Remove unused class PollardRho.
2015-05-01 15:44:47 +02:00
2ae6f996ec
[MATH-964] Remove unused class PollardRho.
2015-05-01 15:44:08 +02:00
bd5afc0b5a
[MATH-1221] Improve performance of ZipfDistribution by caching the nth generalized harmonic.
2015-05-01 14:12:44 +02:00
002276ea31
[MATH-1220] Improve performance of ZipfDistribution.sample. Thanks to Otmar Ertl.
2015-05-01 13:50:10 +02:00
5597ed7ea3
[MATH-1153] Improve performance of BetaDistribution#sample. Thanks to Sergei Lebedev.
2015-05-01 11:57:54 +02:00
35f4fbeeb6
Fixed checkstyle and findbugs warnings.
2015-04-30 18:35:35 +02:00
c769a9ded6
Typos.
2015-04-30 16:25:48 +02:00
afcfbf57b9
[MATH-853] MathRuntimeException becomes the commons base class for all other exceptions.
2015-04-26 22:11:48 +02:00
2f461bdb0f
Fix typo.
2015-04-26 21:18:57 +02:00
b494caa019
Remove spurios change.
2015-04-26 21:12:55 +02:00
a6abb8b003
[MATH-1197] Computation of 2-sample KS statistic was wrong in case of ties.
2015-04-26 20:55:17 +02:00
8ed40d5302
RNG seed in unit test.
2015-04-19 03:50:30 +02:00
e613e029fb
Merge 3.5 back into 4.0 history.
2015-04-17 21:10:07 +02:00
3a4e18ddf1
Code formatting.
2015-04-14 14:53:21 +02:00
0a799598cb
Merge branch 'master' of https://git-wip-us.apache.org/repos/asf/commons-math
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Conflicts:
src/changes/changes.xml
2015-04-13 22:14:53 +02:00
845e1d5423
[MATH-1205] Major refactoring of the descriptive statistics package.
2015-04-13 22:11:35 +02:00
c02d676118
Updated site menu for upcoming 3.5 release.
2015-04-12 19:02:10 +02:00
a6ed07c55c
Moved FastMathTestPerformance out of the main test tree.
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Is is a benchmark rather than a test.
JIRA: MATH-1195
2015-04-12 17:54:36 +02:00
fa6fcf2080
Added a way to build polyhedrons sets from vertices and facets.
2015-04-12 17:15:55 +02:00
4aa1d98adf
Added missing serial version ids.
2015-04-11 14:34:08 -07:00
b6488f0869
Added @Overrides.
2015-04-11 14:04:59 -07:00
9ec53e16d6
Dropped vestigal methods from test distributions.
2015-04-11 13:45:50 -07:00
e31fde875c
Remove deprecated classes in optim package.
2015-04-11 16:05:10 +02:00
0737cf82db
Remove deprecated classes in optim package.
2015-04-11 16:04:53 +02:00
306fa74602
Remove deprecated interfaces/classes/methods in analysis package.
2015-04-11 15:47:35 +02:00
8e4e522151
Add missing @Override tags, formatting.
2015-04-11 14:57:51 +02:00
5d549fc352
Add missing @Override tags.
2015-04-11 14:51:07 +02:00
8d210b4f84
Fixed ignored method parameters in QRDecomposition protected methods.
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JIRA: MATH-1191
2015-04-10 21:36:04 +02:00
8937821b5f
Changed javadoc as the RandomDataGenerator class.
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The class does not implement an interface anymore (the previous
interface has been deprecated in 3.X and removed in 4.0).
JIRA: MATH-1212
2015-04-10 21:06:37 +02:00
8d9ddbca5f
Fixed @Override checkstyle warnings.
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@Override was forbidden at some places in Java 5, but is now mandatory
at the same places in Java 7.
2015-04-10 17:45:37 +02:00
a06a158465
Fixed wrong intersection selection in polyhedrons sets.
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Sometimes the selected intersection point was on the wrong side of the
line (i.e. in the opposite of the direction of the line).
Thanks to Mike Zimmerman for identifying and solving the issue.
JIRA: MATH-1211
2015-04-10 16:37:18 +02:00
b8e4612d48
Added dump/parse utilities for BSP trees.
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These utilities are for test and debug purposes only.
2015-04-10 16:33:43 +02:00
6cd693a422
Fixed javadoc. JIRA: MATH-1214.
2015-04-09 17:47:34 -07:00
a7de358a05
Javadoc warnings.
2015-04-09 14:59:54 +02:00
de5d148d18
Typo.
2015-04-09 14:59:16 +02:00
0a499402d7
MATH-1206
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New API methods in "LeastSquaresProblem.Evaluation" class.
2015-04-09 14:37:42 +02:00
c768ed307d
Fixed wrong handling of a corner case.
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The problem occurs in very difficult to reproduce cases, as it is really
a corner case. When the vanishing cut-subhyperplane occurs during a
Difference operation, the fixed node still has a null cut-subhyperplane.
This was not properply handled.
JIRA: MATH-1162
2015-04-08 17:41:23 +02:00
54b2a69a63
Added missing @Override
2015-03-19 10:35:08 +01:00
a1c5a58276
Fix sonar error: remove private final field and return the DEFAULT value instead.
2015-03-18 22:41:00 +01:00
c440f668ac
MATH-1210
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Improved error reporting.
2015-03-18 16:57:16 +01:00
093e3bb2e3
Fix checkstyle warning, remove forgotten deprecated methods.
2015-03-16 21:29:21 +01:00
b7d8801c36
Add missing @Override tags, add final for member variables where applicable.
2015-03-16 21:26:05 +01:00
9e26d9933a
Add missing @Override tags, add final for member variables where applicable.
2015-03-16 21:24:39 +01:00
bfb3cf8bba
[MATH-1209] Fix link to algorithm description in PoissonDistribution#sample(). Thanks to Jonathan Ogilvie
2015-03-11 22:08:57 +01:00
da4cef0724
Use proper type for changelog entry.
2015-03-10 23:28:33 +01:00
76b7413d2b
[MATH-757] Removed broken and deprecated synchronization support in ResizableDoubleArray.
2015-03-10 23:16:03 +01:00
fbf5a51ea5
Add missing @Override tags, use final for private fields where possible.
2015-03-10 23:05:14 +01:00
7c172a091a
Remove deprecated Vector#distance(Vector) method.
2015-03-10 23:00:03 +01:00
f5532557b9
Merge branch 'master' of https://git-wip-us.apache.org/repos/asf/commons-math
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Conflicts:
src/changes/changes.xml
2015-03-10 22:46:30 +01:00
ab9c3e935e
Add missing @Override tags.
2015-03-10 22:42:03 +01:00
45df5da264
[MATH-945] Added log10 to RealFieldElement.
2015-03-10 22:38:48 +01:00
cc467caf26
Add missing @Override tags, formatting.
2015-03-10 22:30:44 +01:00
ce2badf02e
Corrected the fix for MATH-1208.
2015-03-09 12:37:57 -07:00
b148046add
Made getKernel return a constant distribution for zero variance bins. JIRA: MATH-1203.
2015-03-08 19:36:20 -07:00
c1c61ce70d
Merge branch 'master' of https://git-wip-us.apache.org/repos/asf/commons-math
2015-03-09 00:44:45 +01:00
86eb3a2fa7
MATH-1207
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Relax tolerance in unit test.
2015-03-09 00:42:35 +01:00
4aa4c6d31f
Made getKernel return a constant distribution for zero variance bins. JIRA: MATH-1203.
2015-03-08 14:10:25 -07:00
51a9539c69
Make private fields final if possible, add missing @Override tags for implemented interfaces, javadoc formatting.
2015-03-02 22:53:16 +01:00
1e7d4f0576
Remove unneeded empty lines.
2015-03-02 22:41:44 +01:00
4e08e17ec5
[MATH-958] Remove support for NaNStrategy#REMOVED in SpearmansCorrelation.
2015-03-02 22:41:18 +01:00
0a5cd11327
Remove deprecated interpolation and fitter classes.
2015-02-25 23:02:30 +01:00
d389e94bee
Remove unused imports.
2015-02-25 23:01:48 +01:00
b4669aad3f
Remove deprecated optimization package.
2015-02-25 22:34:53 +01:00
35b688b7ec
[MATH-869] NullArgumentException now extends NullPointerException.
2015-02-25 22:25:47 +01:00
c22e7fb6f9
Remove temporary output.
2015-02-25 22:20:33 +01:00
3fd9cf1753
[MATH-839] Renamed cumulativeProbability(double, double) to probability(double, double) in IntegerDistribution and RealDistribution. Thanks to Gilles.
2015-02-25 21:43:34 +01:00
0351963e6b
Add since tag for inner class.
2015-02-25 21:18:32 +01:00
d98897b11e
Revert back temporary changes.
2015-02-25 17:45:07 +01:00
ccd0fd51a5
Temp changes for analyzing test failures.
2015-02-25 10:01:02 +01:00
6b1b592887
Make method arguments final.
2015-02-25 07:56:38 +01:00
96ba5ec216
Remove deprecated contructors in UniformRealDistribution.
2015-02-24 23:38:51 +01:00
0d3545e5f6
[MATH-1039] Added logDensity and logProbability methods to RealDistribution and IntegerDistribution interfaces.
2015-02-24 23:30:55 +01:00
ece7c6fc67
[MATH-859] Remove deprecated isSupportXXXInclusive methods from RealDistribution.
2015-02-24 23:08:40 +01:00
4be09dfff2
[MATH-437] Remove deprecated KS distribution.
2015-02-24 23:07:58 +01:00
4140e01266
Fix checkstyle warnings.
2015-02-24 11:28:54 +01:00
03e65c98da
Replace removed methods by toArray().
2015-02-23 23:58:44 +01:00
6ac547ddcb
Remove deprecated methods in linear package.
2015-02-23 23:28:37 +01:00
e92a76bc1a
Remove deprecated methods in package geometry.
2015-02-23 23:21:25 +01:00
e6fe53fdae
Remove deprecated classes and methods.
2015-02-23 23:03:35 +01:00
ff4ec1a323
Add changelog entry for MATH-1155.
2015-02-23 22:44:38 +01:00
dc9fcd4140
[MATH-1155] Performance improvement for WELL class random number generators.
2015-02-23 22:39:27 +01:00
c765796382
Update minimum JDK to at least Java 7.
2015-02-23 22:01:49 +01:00
76d5be34f0
[MATH-850] Remove deprecated RandomData and RandomDataImpl classes.
2015-02-19 23:28:28 +01:00
f1b2fcd7f5
[MATH-1204] Added changelog entry, fix javadoc typos.
2015-02-19 22:20:04 +01:00
a56d4998cf
MATH-1204 bracket function gives up too early
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In UnivariateSolverUtils.bracket(...) the search ends prematurely if a =
lowerBound, which ignores some roots in the interval. Fixed by changing the
loop condition so the search continues while b < upperBound. Also added a test
case.
2015-02-19 15:16:28 -05:00
d746a54c2e
Update unit test for LocalizedFormats after removing the deprecated one.
2015-02-19 10:20:51 +01:00
6d50174baa
Remove deprecated classes in package geometry.partitioning.utilities.
2015-02-19 10:01:34 +01:00
d0c62a848c
Remove deprecated methods in ListPopulation.
2015-02-19 10:01:01 +01:00
2e462ec48b
Remove deprecated tag as the method has been made private already.
2015-02-19 10:00:47 +01:00
261ceec84b
Remove deprecated copy method.
2015-02-19 09:54:58 +01:00
6e368658c4
Remove deprecated method medianOf3 in Percentile.
2015-02-19 09:52:49 +01:00
24e3c8632e
Remove deprecated localized format.
2015-02-19 09:50:38 +01:00
2c94388179
Remove deprecated stat.clustering package.
2015-02-19 09:25:46 +01:00
745d383af1
[MATH-1050] Remove deprecated methods ArithmeticUtils#pow(..., long).
2015-02-17 00:13:36 +01:00
5f47ad718e
[MATH-825] Method LaguerreSolver#laguerre(...) has been made private.
2015-02-16 23:57:19 +01:00
d0721feadc
[MATH-760] Made DescriptiveStatistics#windowSize private. Thanks to sebb.
2015-02-16 23:50:24 +01:00
e4e1ac23c7
Update for next development iteration: commons-math4
2015-02-16 23:37:23 +01:00
a7b4803ffe
Update for next development iteration: commons-math4
2015-02-16 23:35:42 +01:00
68e6de3519
Javadoc
2015-02-04 14:10:33 +01:00
a25b7b5846
HTML cleanup
2015-02-04 14:09:37 +01:00
98d49ae58c
Typo
2015-02-04 13:57:58 +01:00
c7fcb448c9
Javadoc
...
MATH-1201
2015-02-04 13:56:35 +01:00
859de3fcba
[MATH-1198] Add changelog entry.
2015-01-26 22:11:05 +01:00
f3e1598dfd
Fixed hidden field warning.
2015-01-26 10:21:07 +01:00
e7bf6afe50
Fixed checkstyle trailing whitespace warning.
2015-01-26 10:20:38 +01:00
eb57c2b4b1
Added missing changelog entry.
2015-01-25 20:44:56 +01:00
3d9a76877b
Merge branch 'master' of https://git-wip-us.apache.org/repos/asf/commons-math
2015-01-25 00:30:26 +00:00
f7e42d2ccf
MATH-1198 Simplify FastMath exp function
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Hopefully also fix Java 1.5 JIT bug
2015-01-25 00:26:21 +00:00
75efbfd6b2
Quadratic mean
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MATH-1199
2015-01-23 16:56:02 +01:00
38e337f5c8
Merge branch 'master' of https://git-wip-us.apache.org/repos/asf/commons-math
2015-01-23 16:53:42 +01:00
6a8ba1fecb
Quadratic mean
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MATH-1199
2015-01-23 16:46:48 +01:00
6383def7f6
Fix javadoc: the type is an interface rather than an abstract class.
2015-01-21 21:03:41 +01:00
15bdcc3be2
Add temporary check for rare test failure.
2015-01-21 00:42:16 +01:00
4e1958256e
Enable jacoco again.
2015-01-13 11:04:32 +01:00
3923fc10fe
Disable jacoco temporarily.
2015-01-13 10:58:15 +01:00
14619d3e60
Remove console output.
2015-01-13 10:40:44 +01:00
cb177b56b7
Readd console output.
2015-01-13 10:35:27 +01:00
0f36265123
Revert previous commit with debug output, fix typo.
2015-01-13 10:31:06 +01:00
c30b59103b
Temporarily ignore FastMath tests and add console output to FastMath.exp().
2015-01-13 10:05:50 +01:00
b262c2359c
Add more debug output.
2015-01-13 09:51:49 +01:00
9a9e726816
Document debug output
2015-01-13 02:00:47 +00:00
b4abfb9367
More debug
2015-01-13 01:23:51 +00:00
dc5f850d1d
Add temp debug output
2015-01-12 22:07:54 +01:00
Thomas Neidhart
Gilles
Luc Maisonobe
Phil Steitz
Evan Ward
Sebb
Thomas Neidhart