69849dd3c5
Optimize queries in JPA
2017-06-14 08:35:41 -04:00
d59b832e74
Merge branch 'master' into minute_precision_in_searchparams
2017-06-12 11:50:01 -04:00
a50a86d9af
Fix crash in JPA server if numeric search parameter has no value
2017-06-11 09:16:48 -04:00
404037b441
Fix some compile issues
2017-06-09 19:37:11 -04:00
c2e5fa3f18
Fix #667 - When using the AuthorizationInterceptor with the JPA server, when a client is updating a resource from A to B, the user now needs to have write permission for both A and B
2017-06-09 11:48:17 -04:00
8b5209ff67
Version bump to 2.5
2017-06-08 06:34:44 -04:00
b6e9a753ca
Merge pull request #660 from HHSIDEAlab/fix-race-condition-in-if-none-exists
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Hacky but workable fix for race condition surfaced by If-None-Exists creates
2017-06-07 21:51:05 -04:00
4caa5dfa8d
Merge pull request #656 from aehrc/feature/scalable_searchbuilder
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Improve SearchBuilder query generation for code:modifier searches
2017-06-07 21:35:50 -04:00
7c6bb01a8b
Don't allow JPA server to save duplicate or empty tags, and fix #664 by
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preventing multiple threads from loading structure definitions for
validation at the same time
2017-06-06 16:44:13 -04:00
aa134fc423
Hacky but workable fix for race condition surfaced by If-None-Exists creates.
...
Some notes from other attempts I made to fix this in a less hacky way:
* Tried to @Autowire myResourceDaos from a setter (rather than using the annotation on a field), and initialize myResourceTypeToDao in that setter, instead. Couldn't get it to work: Spring started throwing odd bean dependency errors. Don't really understand why.
* Tried to move the exceptions being thrown on null getDao(Class) results into that method, but that was breaking a test case. Didn't investigate why.
2017-06-01 03:17:38 -04:00
52a5fcce17
Adding logging
2017-05-30 15:39:33 -04:00
97c83cd8f0
Merge branch 'master' of github.com:jamesagnew/hapi-fhir
2017-05-30 10:05:34 -04:00
3db4091601
Add a null check
2017-05-30 10:05:27 -04:00
6d59b0f5e0
Indexing logging
2017-05-30 10:01:33 -04:00
d0a927ae3f
use disj. of AND and IN for code:modifier searches
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Without this, OR conditions with too many disjuncts are generated which can lead to
failures in the underlying database code generation.
2017-05-29 14:57:16 +10:00
ba40f44d27
Properly index decimal datatype
2017-05-26 06:39:38 -04:00
2fa7aedf63
Fixed the resource type comparison to not use startsWith
2017-05-25 16:47:09 -07:00
b96932a5c5
Fix dependency on new version of commons-codec
2017-05-25 15:24:47 -04:00
e2b329382a
Add some logging to searches
2017-05-25 08:31:29 -04:00
32de48f392
Fix broken tests
2017-05-24 15:50:53 -04:00
5bdd10c7ab
Include patient in $everything even if there are no other resources
2017-05-24 14:24:01 -04:00
d54b62ffe4
Fix compile errors
2017-05-22 16:42:51 -04:00
1ec180628f
JPA server now has configurable properties that allow referential integrity to be disabled for both writes and deletes. This is useful in some cases where data integrity is not wanted or not possible. It can also be useful if you want to delete large amounts interconnected data quickly.
2017-05-22 15:34:44 -04:00
a834770e38
A bit more cleanup for #646
2017-05-22 08:13:00 -04:00
b71ba86a3a
Update copyright per plugin
2017-05-21 16:37:27 -04:00
a13247ad4b
Updates for #646
...
Squashed commit of the following:
commit 9d6d5e92dabb75c4eb185b061d20f487b8856795
Author: James <jamesagnew@gmail.com>
Date: Sun May 21 15:27:26 2017 -0400
Get subscriptions working
commit 6bccdd7594f0a4f802212e11cc823f7a92dd9a5c
Author: James Agnew <jamesagnew@gmail.com>
Date: Sun May 21 14:37:40 2017 -0400
Work on subscription
commit 129f4c9d0d1e6c8fa56dbc5cf78a34c1d6659705
Author: James <jamesagnew@gmail.com>
Date: Sat May 20 19:58:11 2017 -0400
Work on merging subscription
2017-05-21 15:28:08 -04:00
5ef8b70a1f
Merge branch 'master' into master
2017-05-20 18:25:02 -04:00
20c14fe8a6
Make sure we don't update unchanged resources in a transaction
2017-05-20 17:55:09 -04:00
f6ee4db598
Process :missing qualifier on date params
2017-05-19 20:36:06 -04:00
7a24bff0eb
Merge branch 'master' of github.com:jamesagnew/hapi-fhir
2017-05-19 17:15:07 -04:00
a7bb01393a
Add tests
2017-05-19 17:14:50 -04:00
2143c6906b
Merge branch 'master' of github.com:jamesagnew/hapi-fhir
2017-05-19 10:13:45 -04:00
7c48eadf38
Add tests
2017-05-19 06:50:01 -04:00
8701e3ad61
Change millis to int for stopwatch
2017-05-18 22:06:40 -04:00
9ea8e7822a
More fixes for chaining on custom search params
2017-05-18 17:16:30 -04:00
d58a9e7ed4
Further fixes to searching on a chained value
2017-05-18 10:48:05 -04:00
a92d80d860
Correctly encode extensions on the root of a resource with type
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reference
2017-05-17 12:40:10 -04:00
7bb9e5edd9
Custom search parameters could not chain an extension param
2017-05-17 10:46:22 -04:00
5ac91bfb94
Add a test for custom params
2017-05-17 08:19:11 -04:00
b2996d3550
Fix interceptor behaviour
2017-05-15 23:12:50 -04:00
d87b4f2062
Re-enable daoconfig interceptors
2017-05-15 22:11:29 -04:00
da2d7c3bc3
Clean up testpage overlay
2017-05-14 11:27:52 -04:00
5b282c3b25
Merge branch 'master' of github.com:jamesagnew/hapi-fhir
2017-05-14 06:39:37 -04:00
897c65e818
CLI and HttpClient cleanup
2017-05-14 06:39:23 -04:00
cf2d38498d
Header update
2017-05-10 02:12:22 -04:00
95659bed3a
Fix tests
2017-05-10 08:11:23 +02:00
663125fe94
Resthook subscription implementation, event driven websocket subscription implementation, Tminus subscription support, notification on delete
2017-05-09 15:08:59 -07:00
579e5da5ff
Make sure we reuse searches
2017-05-09 11:47:05 +02:00
262e39e57a
Work on term
2017-05-06 11:41:30 +02:00
ef772547c3
Fix an issue in the JPA server if a resource has been previously saved containing vocabulary that is no longer valid. This only really happened if you were using a non-final version of FHIR (e.g. using DSTU3 before it was finalized) but if you were in this situation, upgrading HAPI could cause you to have old codes that no longer exist in your database. This fix prevents these from blocking you from accesing those resources.
2017-05-06 10:51:17 +02:00
e53d747f2b
Get large searches working on Oracle
2017-05-05 15:45:45 +02:00
3780248a2f
Update JPA defs based on new unit test
2017-05-04 06:56:28 -04:00
fdd82e0b2a
Shorten column names in Search table for JPA
2017-05-04 05:51:02 -04:00
c5c6c5eff6
Fix deadlock regression in JPA 2.5-SNAPSHOT
2017-04-29 07:20:43 -04:00
f21ab8bfe6
Add synchronization to SP registry
2017-04-24 07:40:53 -04:00
93b61aac90
Force resource updates when reindexing
2017-04-23 22:20:58 -04:00
bb9cd7c198
Add configuration property to DSTU3 FhirInstanceValidator to allow client code to change unknown extension handling behaviour.
2017-04-23 19:28:45 -04:00
9c595e18f9
Ignore updates that don't actually change anything
2017-04-23 15:04:19 -04:00
841cfb8cf3
Fix test failures from search cleanup
2017-04-22 13:08:29 -04:00
fa2950dacb
Fix tests for expiring search results
2017-04-22 08:50:51 -04:00
dd5580ed2d
Search reuse merged in
2017-04-22 07:47:05 -04:00
405ac50351
Merge branch 'master' of github.com:jamesagnew/hapi-fhir
2017-04-22 06:34:36 -04:00
c311a0b3bf
Work on JPA performance
2017-04-22 06:34:24 -04:00
c09e26e28f
Clean up calls in JPA server for ID
2017-04-22 06:31:55 -04:00
716fa56b8f
Merge branch 'jpa_perf_enhancements'
2017-04-21 06:30:22 -04:00
282f90d174
Perf work
2017-04-20 05:59:10 -04:00
552bd90d59
More perf work
2017-04-19 18:08:38 -04:00
cc526f6d99
Upgrade to STU3
2017-04-18 21:58:23 -04:00
61a61cddee
More perf work
2017-04-18 21:02:25 -04:00
077676fd03
Bring DSTU3 structs up to FHIR R3
...
Squashed commit of the following:
commit 65b70d30c91df2de06679a51323e0340aebba0a7#610
2017-04-18 07:48:38 -04:00
4bf97e836a
Fix memory leak
2017-04-18 06:13:48 -04:00
7f2cf17f9f
Fix perf issue
2017-04-17 17:29:32 -04:00
5adc09ad56
perf enhancements finally working
2017-04-17 16:56:53 -04:00
fbbe792726
Perf work
2017-04-17 14:00:36 -04:00
08ec97e78a
More work on perf
2017-04-16 15:57:58 -04:00
217d9f8176
More perf work
2017-04-16 14:46:15 -04:00
62ece72e6f
More perf work
2017-04-16 12:08:23 -04:00
913fd422a1
Merge branch 'master' into jpa_perf_enhancements
2017-04-14 11:30:19 -04:00
f6acb5633b
Work on perf
2017-04-14 09:50:05 -04:00
54055f5bfb
Support extensions pointing to references for JPA custom search params
2017-04-14 07:26:49 -04:00
1039bbec97
More perf work
2017-04-14 07:25:01 -04:00
23b7de5dd8
More perf work
2017-04-12 18:28:10 -04:00
81aae2b672
More perf work
2017-04-11 06:56:17 -04:00
cba5aeb47b
More perf work
2017-04-10 17:55:50 -04:00
0a8900ee78
Perf updates possibly working?
2017-04-10 16:29:24 -04:00
aa02dd5037
More perf work
2017-04-10 08:05:25 -04:00
04468c8352
More perf work
2017-04-09 21:52:55 -04:00
e32d6bb56e
More perf work
2017-04-09 20:06:56 -04:00
bf0f1421b3
Work on perf
2017-04-09 19:13:55 -04:00
fa435fb8b2
More perf work
2017-04-09 11:48:56 -04:00
c5c154346e
More work on perf
2017-04-08 22:21:57 -04:00
801ae7cb75
NOFT test passing
2017-04-08 21:19:10 -04:00
90a4e2def2
More work on perf improvements
2017-04-08 19:46:51 -04:00
08e5681d8b
Work on perf
2017-04-08 15:12:10 -04:00
dd84fced5e
Merge branch 'master' into jpa_perf_enhancements
2017-04-08 06:54:13 -04:00
0a61096f6f
Add JPA utility method
2017-04-07 11:14:48 -04:00
8284fcab1b
More work on performance
2017-04-07 08:37:48 -04:00
660c2bde72
More work on perf
2017-04-06 22:23:20 -04:00
f48d0d677b
More work on performance
2017-04-06 12:50:36 -04:00
1581cdf9a8
Work on perf
2017-04-04 08:26:04 -04:00
James Agnew
Karl M. Davis
Michael Lawley
Jeff Chung