3f8a8cd8aa
Merge pull request #548 from sekaijin/cleanup
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Cleanup
2017-02-04 16:02:50 -05:00
c85c2269a1
Work on custom params
2017-02-04 14:41:11 -05:00
97ff79d730
Work on custom params
2017-02-02 20:37:58 -05:00
3191c907a3
Work on JPA
2017-02-02 06:23:28 -05:00
b4a362b8ee
Work in progress
2017-02-01 05:55:35 -05:00
ea1ebb245e
Merge pull request #547 from daliboz/master
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Fix #546 CapturingInterceptor will now buffer response
2017-01-31 07:20:01 -05:00
11f1f4f6ee
Deprecate getAllPopulatedChildElementsOfType
2017-01-31 06:53:04 -05:00
ce80007f8d
Bump spring version and refactor examples
2017-01-29 22:55:22 -05:00
788792e004
Merge pull request #538 from CarthageKing/feature-parameterutil-fix
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Ensure ParameterUtil.splitParameterString correctly parses consecutive unescaped delimiter
2017-01-29 17:53:39 -05:00
0223b5341c
Merge pull request #489 from jkiddo/master
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Added new independant overlay build for example usage and lenient handling
2017-01-29 17:50:20 -05:00
b66aa9761e
Allow parsing of RSQuot
2017-01-29 15:49:10 -05:00
a150a96089
dependencies convergence
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correct dependencies convergence
correct version use ${project.version}
2017-01-29 19:22:28 +01:00
23784c1619
remove .settings .project .classpath file of eclipse
2017-01-28 17:13:47 +01:00
c1e6f82385
Fix #546 CapturingInterceptor will now buffer response if the entity is not repeatable.
2017-01-27 17:45:53 -06:00
dabb3ea2c5
Merge branch 'master' of https://github.com/jamesagnew/hapi-fhir into jaxrs-sever-evolution
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# Conflicts:
# hapi-fhir-structures-dstu3/src/test/java/ca/uhn/fhir/parser/JsonParserDstu3Test.java
2017-01-27 10:16:43 +01:00
12598b4e3b
Correctly handle declared extensions with multiple possible types
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Squashed commit of the following:
commit d6ea0552b7e5876f7d867e573c2299234b4a0c1c2eb780a690
2017-01-26 11:07:52 -05:00
8e444fab93
Javadocs
2017-01-25 05:56:22 -05:00
8e0a904997
Add adapter for IServerOperationInterceptor
2017-01-24 13:34:30 -05:00
344e324929
Fix #544
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Squashed commit of the following:
commit 1ab9b58e9f5c752cdace127b76884a599bbe236c#544
2017-01-24 10:47:24 -05:00
3ff29370e6
Merge branch 'master' of github.com:jamesagnew/hapi-fhir
2017-01-21 18:03:58 -05:00
d616d20511
Send correct status code from ResponseHighliterInterceptor
2017-01-21 18:03:41 -05:00
cac44c736c
Add the possibility to use the serverBaseUrl to generate the url of extension, if %BASE_SERVER_URL% is found
2017-01-19 14:54:17 +01:00
c9e11f64aa
Merge branch 'master' into master
2017-01-19 09:03:43 +00:00
59d29c45b3
Feature Request: Add client support for $process-message special operation #407
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Changed client to send messages to a processing server:
Object response = client
.operation()
.onServer()
.processMessage()
.setResponseUrlParam("http://myserver/fhir ")
.setMessageBundle(msgBundle)
.execute();
2017-01-18 19:33:56 +00:00
b59c24ab7c
return 404 instead of 400 when the FHIR resource/endpoint is not
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recognized/not supported
2017-01-17 20:37:43 -06:00
22f796fa7c
Allow history operation at type level with authorizationinterceptor
2017-01-16 18:41:39 -06:00
322051a383
Fix failing tests
2017-01-14 07:55:42 -06:00
dbc6abc658
Fix #504 - Error if custom type has illegal extensions
2017-01-13 21:46:16 -06:00
fa1ad5ba85
Fix #519 - Issues with JPA capabilitystatement related to the _id param
2017-01-13 21:19:19 -06:00
a6a1416888
Place empty values when splitting a parameter with a certain char and
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here are at least two unescaped and consecutive variants of the given
char in the string.
This ensures that for example a QuantityParam with a param value of
"5.5||mg" the "mg" will not be treated as the 'system' but be treated
correctly as the 'unit' of the parameter object.
2017-01-12 14:21:30 -06:00
3b41d85952
Server interceptor methods were being called twice unnecessarily by the JPA server, and the DaoConfig interceptor registration framework was not actually useful. Thanks to GitHub user @mattiuusitalo for reporting! Fixes #532
2017-01-11 20:57:39 -05:00
c7767937fc
License version bumps
2017-01-09 17:48:42 -05:00
e05b0e5d8a
Add test for localizer and add some docs
2016-12-30 08:53:42 -05:00
118c2c4238
Dependency changes
2016-12-25 12:49:07 -05:00
b448e13edd
Version bump to 2.3
2016-12-20 19:01:31 -05:00
0ec61533a8
Publish 2.2
2016-12-20 19:00:37 -05:00
750d6d4655
Switch public server to use CapabilityStatement for metadata return type
2016-12-20 15:35:54 -05:00
964919d880
Improve parsing
2016-12-19 14:03:11 -05:00
7838d511d0
Fix typo in IHttpResponse
2016-12-19 11:29:05 -05:00
4eb2e017f8
Fix #528 - Allow reads by compartment in authorizationinterceptor
2016-12-13 18:30:47 -05:00
ab17ee68a3
Revert IFhirVersion method signature changes for #520
2016-12-11 18:55:59 -05:00
e678908087
Licenses
2016-12-11 18:04:59 -05:00
9cb014724b
Add validator for DSTU2.1
2016-12-11 17:39:05 -05:00
901a85880c
Update STU3 definitions and being in STU2.1 defs too
2016-12-10 19:51:25 -05:00
b0d656e5d9
Refactor fix for #520 a bit so that version in DSTU3 is always pulled
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from the model
2016-12-10 14:40:27 -05:00
47ea6c3426
Merge pull request #520 from aehrc/feature/legacyContentTypeFHIR140
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Ensure that older DSTU3 versions use the legacy mime types
2016-12-10 14:18:15 -05:00
ee63bbea74
Fix #516 - Handle STU3 invalid enum values with an appropriate exception
2016-12-10 14:14:22 -05:00
1fba4ff265
Test refactor
2016-12-10 08:47:28 -05:00
0def3d5a72
Merge pull request #525 from aehrc/feature/parser_exception_handling
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#516 Report invalid values for enums through parser error handler
2016-12-10 07:39:36 -05:00
5149e581db
Fix #521 - Wrong or missing ID body in update should be an error
2016-12-08 08:31:52 -05:00
a9a3507544
#516 Report invalid values for enums through parser error handler
2016-12-06 10:32:23 +10:00
fd26f074e5
Merge branch 'master' of github.com:jamesagnew/hapi-fhir
2016-12-04 21:09:48 -05:00
ccfe74ba38
Add license headers
2016-12-04 21:09:28 -05:00
8846477b7b
Ensure that older DSTU3 versions (ie Baltimore / May2016 / 1.4.0) use the legacy mime types
2016-11-30 12:03:02 +10:00
fc55c2cae8
Merge pull request #518 from aehrc/master
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#517 Add fallback for for pre-CapabilityStatement STU3 client
2016-11-25 18:00:36 -05:00
81773de261
Fix #276 - Prevent contained resources being encoded as duplicates
2016-11-25 17:18:57 -05:00
fcf8894d11
silly missing bracket
2016-11-25 13:14:48 +10:00
f6ae22c59c
#517 Add fallback for for pre-CapabilityStatement STU3 client
2016-11-25 12:05:59 +10:00
69871bb8c2
Improve testing on CorsInterceptor
2016-11-24 19:25:37 -05:00
888f42a032
Introduce new CORS interceptor and switch examples to use it
2016-11-21 18:30:51 +01:00
03935be97f
Work on common FluentPath interface
2016-11-21 15:52:17 +01:00
5846ce4518
Make the parser configurable so that when parsing an invalid empty value (e.g. {"status":""} parser will either throw a meaningful exception or log a warning depending on the configured error handler.
2016-11-21 14:48:44 +01:00
bf35f7e4b2
Fix #495 - Auto-detect DSTU3 mode when those resources are on classpath
2016-11-21 13:44:54 +01:00
f710094c93
Merge branch 'master' of https://github.com/jamesagnew/hapi-fhir
2016-11-15 13:42:07 +01:00
6aba4610e6
Added initial lenient handling
2016-11-15 13:41:13 +01:00
72a62817aa
Improve detection for #477
2016-11-15 05:54:56 -05:00
4252415e9c
Fix #477 - Gracefully handle unexpected elements starting with _
2016-11-15 05:44:45 -05:00
8676489792
Don't incorrectly block transactions
2016-11-11 23:52:16 -05:00
2d7592f7a8
Version bump to 2.2-SNAPSHOT
2016-11-11 22:39:45 -05:00
047ca6a308
license header
2016-11-11 20:17:06 -05:00
2dd26b6367
Version bump to 2.1
2016-11-11 15:16:53 -05:00
a03805a6d4
Clean up patch client
2016-11-11 15:08:16 -05:00
846aecfe89
Merging #470
2016-11-11 10:45:53 -05:00
01afc49863
Documentation
2016-11-11 10:43:03 -05:00
a5d5d3e031
Bump FHR version
2016-11-06 17:34:13 -05:00
af8ae69ee4
AuthorizationInterceptor enhancements
2016-11-04 07:43:22 -04:00
f838b80373
Work on authorization interceptor
2016-11-04 06:53:26 -04:00
6cb502266c
More cleanup for auth interceptor
2016-11-03 08:27:14 -04:00
8c53ad24f7
Clean up authorization interceptor tests
2016-11-03 08:10:54 -04:00
3a5a771de7
Fix #484 - Correctly parse resources containing an empty div tag as the narrative
2016-11-03 07:51:11 -04:00
e7e0bf8d54
Fix regression in AutohrizationInterceptor
2016-10-26 21:55:08 -04:00
f5bec16cb4
Fix tests for #472
2016-10-26 14:10:43 -04:00
a67171e231
Fix #472 - Wrong header being returned (Content-Location instead of
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Location) on STU3 server
2016-10-26 12:12:19 -04:00
2a7fa4d8a5
Make authorizationinterceptor stricter
2016-10-22 18:00:55 -04:00
173d40496d
Merge pull request #455 from hnnesv/dstu1-atom-entry-author
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DSTU1: Add entry author to encoded xml bundle
2016-10-20 11:28:59 -04:00
913fd32c2b
Support JSON-like resource structures ( #469 )
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* rebuild on 2.1 code and add more test coverage
* additional test coverage
2016-10-19 10:40:38 -04:00
3d686e9383
Fix #464 - Pretty print by default in ResponseHighlighterInterceptor
2016-10-18 14:58:28 -04:00
f80bf98dcd
Fix #327 - Correctly serialize JSON extension with a reference to a
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contained resource
2016-10-14 16:36:29 -04:00
e56c75e80c
Switch Android library to use OkHttp by default
2016-10-14 16:15:27 -04:00
deae820ebe
Fix up comnpile issue
2016-10-12 15:29:40 -04:00
f47597d2ec
Rename client param method
2016-10-12 14:51:47 -04:00
8c455d41b6
Rename method from #451
2016-10-12 14:47:51 -04:00
09af42200c
License headers
2016-10-11 05:30:22 -04:00
b37a1edaae
Fix offset error when returning multiple pages in JPA search
2016-10-07 17:42:02 -04:00
0093403860
Merge branch 'master' of github.com:jamesagnew/hapi-fhir
2016-10-07 11:31:12 -04:00
2c4139dc82
Allow fluent client to handle return types other than Parameters when
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invoking operations
2016-10-07 11:29:53 -04:00
11d3ae9447
Fix #411 - Searching by POST with urlencoded parameters doesn't work if
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interceptors are accessing the parameters and there is are also
parameters on the URL
2016-10-06 13:23:32 -04:00
f5eda76388
Use new STU3 mimetypes by default
2016-10-06 12:17:59 -04:00
a4975887b8
Merge branch 'master' of github.com:jamesagnew/hapi-fhir
2016-10-06 06:28:06 -04:00
2a5c26b08b
Dependency bump
2016-10-05 05:17:07 -04:00
61d6f1ba8d
Second attempt to fix #459
2016-10-04 17:55:28 -04:00
012090b719
Fix #459 - Race condition in unit tests
2016-10-04 17:15:51 -04:00
1fd881d8f8
Return an error if a parameter is called with a chain even though it
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doesn't support chaining
2016-10-04 17:02:13 -04:00
26cd316343
Fix #414 : Parser should not choke with a NullPointerException if it
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encounters an extension without a URL
2016-09-30 17:35:29 -04:00
ff4755fbf3
Fix #441 : Correctly handle search with chains across a field with choice
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type
2016-09-30 14:03:20 -04:00
eba136d706
Correctly handle custom types in programatic access to JPA
2016-09-27 14:22:48 -04:00
92e6b6d884
DSTU1 Atom: Add entry author to encoded xml bundle
2016-09-23 13:06:21 +02:00
3d73aad275
Fix unit tests
2016-09-21 16:58:57 -04:00
ae97165a0a
Add interceptor method on server which will be called after all other
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processing
2016-09-18 16:08:16 -04:00
40286f49c2
Merge branch 'patch' of github.com:jamesagnew/hapi-fhir into patch
2016-09-17 23:40:54 -04:00
6e97936eca
More work on patch
2016-09-17 16:55:21 -04:00
58185d199b
Updated GenericClient to call MethodUtil updated signature
2016-09-17 14:24:18 -04:00
ad447126f2
Merge in patch changes
2016-09-17 13:55:12 -04:00
e50a34b540
Merge branch 'patch' of github.com:jamesagnew/hapi-fhir into patch
2016-09-17 13:41:17 -04:00
1343badba4
Working on patch
2016-09-17 13:40:03 -04:00
5ebc3ef513
initial patch scaffolding
2016-09-17 13:36:56 -04:00
364c18e06e
Use more compatible Accept header in STU3 client. Also fixes missing
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Woodstox library in android builds per #450 )
2016-09-16 23:46:06 -04:00
e2f03a9a26
Fixed issue with adding profile information to an unmodifiable list ( #448 )
2016-09-16 15:02:22 -04:00
f92c5a7232
Fix #446 - Don't give child resources the ID of the parent
2016-09-16 15:01:14 -04:00
1db9f726f9
Localizer update
2016-09-15 09:05:49 -04:00
a2ffc6af05
Fix #444 - Correct handling of parsing milliseconds in dates before 1970
2016-09-09 18:18:28 -04:00
ed7e6929a7
Add gitignore
2016-09-09 08:32:45 -04:00
6357c38180
Support _has param in conditional URLs in JPA
2016-09-08 13:14:15 -04:00
202a1ea885
Fix web testing UI regression
2016-09-06 17:59:04 -04:00
6b9f8ec487
Fix unit tests
2016-08-30 18:27:57 -04:00
98e0753b93
Properly add include resources
2016-08-30 16:38:09 -04:00
906bcfb803
Version bump to 2.1
2016-08-30 10:55:55 -04:00
d27aad487e
Bump to 2.0 release
2016-08-30 10:50:04 -04:00
d36e0013c0
Add version constant for dstu2.1
2016-08-29 07:33:29 -04:00
333aa0afde
Correctly update versions on transactipn update
2016-08-28 22:56:59 -04:00
a1105fac1e
Merge branch 'master' of github.com:jamesagnew/hapi-fhir
2016-08-25 18:27:32 -04:00
17940b8a24
Improve performance when parsing contained resources
2016-08-25 17:41:33 -04:00
3c65b64ed7
Fix changelog typos
2016-08-25 08:16:27 -04:00
acdbdc0be7
Fix #426 - Extension with datatype of ID failed to parse
2016-08-25 07:32:37 -04:00
9d3bd1ada4
Don't add an empty narrative if no template exists
2016-08-24 13:06:08 -04:00
9f5d672133
Improve error handling in narrative generator
2016-08-24 06:09:55 -04:00
c4d302df8d
Upgrade to Thymeleaf 3
2016-08-23 19:11:49 -04:00
1ca39a9e71
Fix tests
2016-08-23 07:49:18 -04:00
aa16a46b74
Fix #428 - Fix NPE when encoding extension
2016-08-23 07:23:07 -04:00
0e7405cef2
Better error message when localizer can't find key
2016-08-22 21:33:07 -04:00
cc6c32f987
Fix tests
2016-08-22 09:43:01 -04:00
e07b5299ac
Merge branch 'master' of github.com:jamesagnew/hapi-fhir
2016-08-22 09:19:22 -04:00
35a890db34
Merge branch 'master' of github.com:jamesagnew/hapi-fhir
2016-08-22 07:42:02 -04:00
7f15520db8
Don't include Location header in server responses for DSTU3 servers
2016-08-21 11:39:44 -07:00
379abb8e47
Don't strip urn: prefixes from references when encoding
2016-08-16 11:23:07 -07:00
eee168ced6
Add support for conditional operations to AuthorizationInterceptor
2016-08-15 13:35:50 -04:00
b0d19c3a65
Fix #423 - Encode custom types with custom type fields correctly
2016-08-14 13:05:16 -04:00
8354f4b565
Use correct accept header
2016-08-05 18:39:44 -04:00
74950a4efc
Fix regression when parsing contained resources
2016-08-05 18:01:44 -04:00
4ff25b093f
Add license headers
2016-08-05 15:50:53 -04:00
545b359697
Fix #406 - Allow arbitrary authentication realm
2016-08-01 21:36:50 -04:00
dd8b1cd979
Use corrrect types from client
2016-07-27 18:15:09 -04:00
41b58108f2
Bump version dependencies and return 200 for conditional delete with no matches
2016-07-25 08:46:02 -04:00
fd4979f56a
Fix compile issues
2016-07-24 11:11:27 -04:00
294e467811
Fix #409 - Tag#setCode did not work
2016-07-24 09:28:22 -04:00
7dbd5a21ca
Fix tests
2016-07-24 09:20:54 -04:00
a9b29d5088
Merge branch 'master' of github.com:jamesagnew/hapi-fhir
2016-07-23 18:51:08 -04:00
350e82b6cf
Fix #403 - Allow references to keep versions when encoding
2016-07-23 18:48:00 -04:00
748c13d0dc
Remove bad dependency
2016-07-22 18:33:16 -04:00
7bea8431f7
Add interceptor for rejecting TRACE and other invalid verbs
2016-07-19 19:16:09 -04:00
94128e2e6d
Fix tests
2016-07-18 13:50:08 -04:00
5073692eda
Always include SUBSETTED tag when _elements is used on server
2016-07-18 07:05:11 -04:00
196c11bfa2
Use new style mimetypes but keep supportuing the old ones as well
2016-07-17 18:35:06 -04:00
ef1c81e241
Fix #150 - Don't encode null fluent client values
2016-07-14 07:18:48 -04:00
f6601cc347
Add example for terminology uiploading
2016-07-13 09:40:50 -04:00
fa37afb61f
Merge branch 'master' of github.com:jamesagnew/hapi-fhir
2016-07-12 21:44:52 -04:00
ed941a116b
Update to use GSON
2016-07-12 21:44:40 -04:00
c3e9f618eb
Version bump to 2.0-SNAPSHOT
2016-07-12 11:12:07 -04:00
8156abf803
More prep for 1.6
2016-07-06 08:19:27 -04:00
acaf2135c5
Finalize 1.6 release
2016-07-06 07:29:20 -04:00
a8585c881d
Fix #396 - Make tests timezone independent
2016-07-04 13:48:05 -04:00
a3af502ee2
Add test for #391
2016-07-03 10:23:48 -04:00
32bdd14639
Work on term service
2016-07-02 17:14:36 -04:00
4a49e5b7f9
Merge branch 'master' of github.com:jamesagnew/hapi-fhir
2016-07-01 14:31:25 -04:00
b8f1f39ead
Add tests and get :below queries working for built-in code systems
2016-07-01 08:51:47 -04:00
7ef48413c4
Term service enhancements
2016-06-30 17:45:41 -04:00
38d30eef49
Respect order for order=REPLACE_PARENT
2016-06-29 10:26:36 -04:00
9b6f548970
Work on term service, and allow child classes when serializing
2016-06-29 08:08:42 -04:00
b587e3695b
Add client integration test
2016-06-27 13:43:12 -04:00
c28a2c40f0
Fix #394 - Don't use a method from Commons-Lang3 3.3
2016-06-27 06:19:22 -04:00
c2dbcc7ff0
Merge branch 'master' of github.com:jamesagnew/hapi-fhir
2016-06-26 23:12:26 -04:00
fae4344c36
Add documentation around security interceptor
2016-06-25 11:27:55 -04:00
556058a7b7
Tests passing
2016-06-25 10:55:31 -04:00
db0a208927
Work on terminology importing
2016-06-24 18:40:44 -04:00
b84150ff5e
Randomly set locale after each test in order to make sure we aren't
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dependent on a specific environment
2016-06-21 09:53:24 -04:00
f4c6f09f08
Fix tests
2016-06-20 07:52:44 -04:00
2e8c20dc83
More work on terminology services, and add support to operations to AuthorizationInterceptor
2016-06-20 07:19:08 -04:00
36505c60d8
More work on term service importing
2016-06-19 10:35:27 -04:00
a7cbb5c022
More test coverage
2016-06-18 13:32:45 -04:00
b3d8d453de
Improve test coverage and clean up UnclassifiedServerFailureException processing
2016-06-18 10:37:43 -04:00
785ce1deb9
Remove some dead code and improve test coverage
2016-06-17 07:40:17 -04:00
dcecde5db9
Improve test coverage
2016-06-16 22:52:10 -04:00
c9f85111ab
Add some tests to GenericClient
2016-06-16 07:42:06 -04:00
1683cf8cef
Switch to jacoco
2016-06-15 17:34:50 -04:00
e2f1beef2c
Fix some tests
2016-06-14 22:03:24 -04:00
f3dcc3e893
Add lots of tests
2016-06-14 17:57:08 -04:00
dba470f8d6
Add some tests
2016-06-14 07:24:03 -05:00
aac914df22
Refactor OperationParameter to try and improve test coverage
2016-06-14 07:11:47 -05:00
1166a2ee67
Work on support for _at parameter in history operation
2016-06-13 07:31:25 -05:00
69572f7b3a
More tests for #381
2016-06-11 13:04:58 -05:00
23840ecb7a
Fix some tests
2016-06-11 06:43:27 -05:00
035ed27dab
Fix #380 - Correct cardinality for OperationDefinitions
2016-06-10 17:15:16 -05:00
189038ad08
Fix #267
2016-06-10 10:49:51 -05:00
6c9707b86e
More work on #381
2016-06-10 10:16:10 -05:00
6eca6e5efe
Update ResponseHighlighterInterceptor to emit raw content for
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_format=xml and _format=json
2016-06-10 10:15:41 -05:00
4cfabfe4a6
Rework tests for #381
2016-06-10 09:29:30 -05:00
a3484f84c1
Work on #381 - Still need to apply these changes to STU3 type
2016-06-09 21:48:53 -04:00
cf1ea276c9
Fix #362 - Dead code in OperationParameter
2016-06-08 14:49:36 -07:00
7123205a83
Fix build
2016-06-07 10:04:37 -07:00
7e57aed5d6
Significant performance enhancements for context startup
2016-06-06 11:15:11 -07:00
99568a4b30
Clean up client fluent param types and add some test coverage
2016-06-05 11:33:43 -04:00
87eabe6bf8
More work on terminology server
2016-06-05 09:40:06 -04:00
d966190f9e
Fix #371 - STU3 server and client should use new sort parameter style
2016-06-04 12:34:44 -04:00
9a42ec16f7
Update license files# Please enter the commit message for your changes. Lines starting
2016-06-02 21:25:05 -04:00
8a933cd2c2
Remove some cruft from the model
2016-06-01 09:18:38 -04:00
25f8d8d22d
Merge branch 'master' of github.com:jamesagnew/hapi-fhir
2016-06-01 09:11:06 -04:00
1b8843aa5e
More work on terminology service
2016-06-01 09:10:47 -04:00
39a96f0258
Fix #374 - Include ETag and Last-Modified headers in response
2016-05-31 13:44:21 -04:00
f45ad117fe
Improve error messages for invalid validate request
2016-05-29 22:23:30 -04:00
eb3b656a5f
Syn RI - Build still failing :(
2016-05-28 12:53:59 -04:00
eae96983e8
Merge branch 'master' of github.com:jamesagnew/hapi-fhir
2016-05-28 10:37:27 -04:00
e1e6a0d5b0
Sync model with RI latest version
2016-05-28 10:35:08 -04:00
b4de3aa5dd
Merge branch 'master' of github.com:jamesagnew/hapi-fhir
2016-05-27 10:27:27 -04:00
9ed1bb94f9
Remove some unused code
2016-05-26 21:42:03 -04:00
a5debc07a3
DateTime parser incorrectly parsed times where more than 3 digits of
...
precision were provided on the seconds
after the decimal point
2016-05-25 19:20:51 -04:00
efe9cd1dd1
Work on term svc
2016-05-24 06:34:06 -04:00
ee031667c5
Fix #369 - FhirTerser cloneInto method fails if target contains extension
2016-05-23 09:20:40 -04:00
de65184afb
Fix tests
2016-05-21 20:52:37 -04:00
20b6994cc8
Fix #364 - Allow serializing custom types that contain custom datatypes
2016-05-21 14:35:10 -04:00
3d8776f6ed
Fix #363 - Allow remote references in JPA resources
2016-05-21 12:58:04 -04:00
6c3446dee1
Fix build
2016-05-17 11:30:57 -04:00
ddb35d0faa
Merge branch 'term_svc' of github.com:jamesagnew/hapi-fhir into term_svc
2016-05-17 09:05:47 -04:00
78fa6eaeaf
More work on terminology service
2016-05-17 09:05:37 -04:00
7942d69d5d
Accept conditional updates with _id as parameter
2016-05-16 19:11:25 -04:00
c7d191dc38
Fix all tests
2016-05-14 16:59:31 -04:00
d5e2170595
Don't discard _count from parameters when method has @Count
2016-05-13 19:13:39 -04:00
563f4e4c46
Treat date eq params correctly
2016-05-13 18:49:41 -04:00
84a7856c19
Treat missing ID in resource body as warning
2016-05-13 18:04:07 -04:00
abd8bc2f14
Work on term svc
2016-05-13 17:40:56 -04:00
c94f4bb19b
Work on term services
2016-05-11 06:30:45 -04:00
3e77d3e37e
Add _has support (this is an experimental parameter being tested)
2016-05-10 11:47:30 -04:00
81cb769d18
Allow operation names to be escaped in URL
2016-05-07 19:28:36 -04:00
af2b702aa4
Fixes from Montreal connectathon
2016-05-07 14:24:33 -04:00
2cf79d2767
Wrong comment, unable to set type in new versions
2016-05-05 15:23:50 +03:00
03e90b90c0
Merge pull request #359 from subhrajyotim/master
...
Fix: Add null check in JsonParser, Relax property handling introduced in Jaxp 1.5
2016-05-05 07:09:06 -04:00
ad9ff20f8e
Merge pull request #355 from euvitudo/jaxrsserver-with-dstu3
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Updated jaxrsserver base and example for DSTU3
2016-05-05 06:58:17 -04:00
82c1e687fd
Fix NPE in LoggingInterceptor
2016-05-04 11:48:50 -04:00
ff562a3f00
Fix #360 - Correctly parse spaces in URL parameters
2016-05-04 10:09:02 -04:00
b4d3a7bb74
Don't highlight AJAX requests
2016-05-04 06:59:28 -04:00
284f0f14b0
Fix: Add null check in JsonParser, Relax property handling introduced in Jaxp 1.5 for some compatibility with existing 1.4 version
2016-05-04 15:24:36 +05:30
244cad6224
Allow validator exceptions to be ignored via confoguration
2016-05-03 21:58:09 -04:00
cce0ce6b8e
Add parser for URL parameters to avoid Servlets using ISO-8859-1 instead of UTF-8
2016-05-03 08:58:56 -04:00
804149205a
Work on getting tests passing
2016-05-02 11:42:55 -04:00
c90795ccef
Merge branch 'master' of github.com:jamesagnew/hapi-fhir
2016-05-02 09:03:48 -04:00
27ec35338a
Update to latest structure defs and validator
2016-05-01 21:31:14 -04:00
e3e81ff202
Fix #352 - Client should auto download resource if server ignores prefer header
2016-05-01 09:30:12 -04:00
31d16fca03
Updated jaxrsserver base and example for DSTU3
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Added support for specifying DSTU3 in the constructors, where the default is DSTU2, to maintain backwards compatibility.
Updated interface usage to IBase... (e.g., IResource -> IBaseResource), which is compatible with DSTU3.
Added tests specifically for DSTU3; kept the existing tests as DSTU2.
Provided examples for DSTU3.
2016-04-29 12:50:15 -06:00
2d81612cd8
Fix #350 - Correct serialization for custom types which have fields
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replacing other fields
2016-04-28 13:25:20 -04:00
8b3dd4234c
Fix tests
2016-04-25 08:01:16 -04:00
3fce4cb087
Fix #344 - make getResourceDefinition(String) and getElementDefnition(String) case insensitive
2016-04-25 07:19:31 -04:00
d45a9b67dc
Allow forced IDs to be reused between resource types
2016-04-24 19:24:55 -04:00
514da88787
Improve performance in parser when parsing large bundles
2016-04-23 13:54:16 -04:00
3eb805fb0a
Respect _format=application/xml+fhir
2016-04-23 12:17:27 -04:00
941091dbf7
Deprecate fluent search without an explicit bundle type declaration
2016-04-23 10:15:13 -04:00
d76e0008ac
Fix #342 - The HTTP 400 if request fail to parse
2016-04-22 07:19:57 -04:00
38e80531bb
Bump version to 1.6-SNAPSHOT
2016-04-22 07:05:05 -04:00
dd3f1dd33c
Fix #345 - ResponseValidatingInterceptor throws an exception with response has no content
2016-04-22 07:04:14 -04:00
fcf0604e98
Site doc updates
2016-04-21 07:15:01 -04:00
2c665d1b39
Merge branch 'master' of github.com:jamesagnew/hapi-fhir
2016-04-19 21:58:37 -04:00
81fa46820a
Correctly support _summary=search option
2016-04-19 21:58:20 -04:00
3a0de6e6f8
Fix #339 - Disable XXE XML parsing vulnerability
2016-04-19 07:55:24 -04:00
153c3ac5aa
Merge branch 'master' of github.com:jamesagnew/hapi-fhir
2016-04-18 10:07:22 -04:00
54f89073fe
Add option to validation uploader to specify FHIR version
2016-04-18 10:07:09 -04:00
f3a41570d3
Try to get tests workign on Travis.. yet again
2016-04-17 19:25:11 -04:00
846e216c04
Fix tests
2016-04-17 12:58:36 -04:00
5a818a38e8
FIx tests
2016-04-17 10:49:16 -04:00
1af65ff5a8
Fix #335 (also fixes #336 ) - Correctly parse and serialize IDs on elements within a resource
2016-04-17 10:12:34 -04:00
3f2b5fdeb7
Get security interceptor working
2016-04-16 10:22:43 -04:00
533c0c87ab
Fix tests
2016-04-14 09:14:32 -04:00
72640dc720
Correct encoding order for DSTU2 resources
2016-04-14 07:53:37 -04:00
8a37ed3b59
Merge branch 'master' of github.com:jamesagnew/hapi-fhir
2016-04-14 06:38:08 -04:00
0780b7e472
Add tests
2016-04-14 06:36:29 -04:00
a090f5481f
Try to get cobertura working
2016-04-13 10:33:58 -04:00
072ec29f13
Fix build error
2016-04-11 10:52:27 -04:00
d7c683f6b9
Merge branch 'master' of github.com:jamesagnew/hapi-fhir
2016-04-11 09:08:34 -04:00
2f37015d57
Clean up parsers so that elements are always encoded according to their order in the structures that contain them
2016-04-11 08:36:12 -04:00
88157fe1a6
Test data uploader fixes
2016-04-08 16:31:42 -04:00
5cd13bc73f
Improve error logging when the wrong version structure is passed into a parser
2016-04-07 13:55:38 -04:00
39fc134482
Fix #326 - Correctly serialize DSTU3 references in JsonParser. Thanks to
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@fw060 for the patch!
2016-04-05 16:33:29 -04:00
079f966086
Parser enhancements when parsing bundles
2016-04-05 08:59:24 -04:00
891dddff1e
Work on auth interceptor
2016-04-04 06:21:49 -04:00
45390ebc89
Don't parse 1974-12-25+10:00 as this is not a valid FHIR time
2016-04-03 18:45:08 -04:00
20e04a7c80
Merge branch 'dstu3_structs'
2016-04-03 18:16:02 -04:00
18b3d0df65
Update to DSTU3 Montreal definitions
2016-04-03 18:14:31 -04:00
6d0dcc0213
More work on auth module
2016-04-02 08:59:01 -04:00
c345209ce4
Fix #318 - Apply setDefaultTypeForProfile to contained resources
2016-04-01 17:10:49 -04:00
21b42acc94
Update licenses
2016-03-29 13:01:51 -04:00
46ba27ec8f
Work on security interceptor
2016-03-28 20:51:27 -04:00
b2f11e0bfc
Fix #317 - Allow search params to be used when doing REST operations
2016-03-26 13:44:54 -04:00
6ffb1c8c56
Fix #312 - Don't fail if extension list contains a null
2016-03-25 19:27:18 +01:00
f49130baf8
Add unit tests and documentation to the JAX-RS client implementation
2016-03-25 19:17:41 +01:00
f9fa6265df
Correctly handle JPA search by token with system but no code
2016-03-25 16:20:43 +01:00
c6f06548fc
Fix #315 - Use custom types for searches and other client operations
...
when requested
2016-03-24 11:09:41 +01:00
1adfc4b4d9
Fix #315 - Allow declaring of custom types for specific profiles
2016-03-22 11:46:08 +01:00
ab4deb406c
Allow runtime query of bound enum type
2016-03-18 19:41:43 +01:00
82c6d82444
Sere up Binary resources as binary content even if the browser puts
...
application/xml in the Accept header
2016-03-18 18:38:44 +01:00
9aa7eea274
Add mode to parser to force it to not encode certain elements when serializing
2016-03-16 07:53:21 -04:00
00ced6a652
Improve performance of _lastUpdated queries in JPA server
2016-03-14 06:31:45 -04:00
6ddf91d9e2
Correctly handle extended operation in annotation based client where the
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response is a raw resource and not a Parameters resource
2016-03-12 15:10:02 -05:00
452316aed7
Fix #313 - Do not treat OPTIONS [base]/foo as a request for server's
...
conformance statement. Thanks to Michael Lawley for reporting!
2016-03-12 14:53:20 -05:00
ce253bed70
Properly deserialize bound codes
2016-03-12 13:23:55 -05:00
232afee955
Improved error messages for #305
2016-03-11 07:56:00 -05:00
ed92f64e52
Fix #305 - Don't allow update resource body IDs to be missing or incorrect
2016-03-10 07:44:05 -05:00
3897167518
Return correct bundle type on $everything operation
2016-03-09 23:11:40 -05:00
8de41ca8b4
Attempting to reduce memory usage during tests
2016-03-06 14:38:18 -05:00
99a4b2c29e
Refactor JPA SearchBuilder
2016-03-05 20:46:04 -05:00
b147083f5a
Fix #308 - Remove unneded warning on parsing declared extension
2016-03-02 22:18:33 -05:00
970bc3ed89
One more test for #304
2016-03-02 07:29:09 -05:00
94f50686bc
Fix #304 - Better error message if wrong generic type is used
2016-03-02 07:06:17 -05:00
3fd9f9518a
Handle unexpected extensions when parsing using IParserErrorHandler
2016-03-02 06:52:46 -05:00
496d866f48
Fix #274 - Primitive elements with no value but an extension were sometimes not encoded correctly in XML, and sometimes not parsed correctly in JSON.
2016-02-28 22:15:43 -05:00
66ec863bde
Fix build
2016-02-28 21:19:39 -05:00
ed5bffba9e
Fix #299 - Don't crash if the client receives extensions in Bundle.entry.search
2016-02-28 19:38:54 -05:00
c7d3f39457
Fix #296 - Handle :missing qualifier on QuantityParam
2016-02-28 18:32:43 -05:00
d8c571dfdc
Just some cleanup
2016-02-28 18:25:20 -05:00
c14a1330b4
Fix #302 - Don't crash server when adding profiles
2016-02-28 16:07:28 -05:00
524b16b1e8
Fix header generation for clients
2016-02-28 15:44:10 -05:00
1da5855c9c
Add Eclipse files to git
2016-02-28 14:02:29 -05:00
f1e1ee9ff9
Merge JAX-RS client fixes
2016-02-28 13:34:57 -05:00
69450c7dab
Merge branch 'master' into jaxrs-client
2016-02-27 09:48:36 -05:00
7fdbee6f21
Merge branch 'master' of github.com:jamesagnew/hapi-fhir
2016-02-26 18:20:32 -05:00
39f6420066
Start working on compartment support
2016-02-26 18:16:35 -05:00
d383b402d1
Correct handling of Binary resources in client and server where the
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binary contains embedded FHIR content
2016-02-25 14:31:26 -08:00
4a26064cd6
In the client, the create/update operations on a Binary resource (which
...
use the raw binary's content type as opposed to the FHIR content type)
were not including any request headers (Content-Type, User-Agent, etc.) Thanks to Peter Van Houte of Agfa Healthcare for reporting!
2016-02-25 12:54:52 -08:00
d11cbab15c
Don't add WWW-Authenticate header to response on AuthenticationException
2016-02-25 11:03:04 -08:00
d64cf57b0d
Inclusion of jaxrs-client : complete removal of the dependencies for jaxrsserver project to apache httpclient and httpcore and only rely on jax-rs
2016-02-25 13:38:31 +01:00
f8ea639af9
Merge remote-tracking branch 'remotes/petervanhoute/jax-rs-client': inclusion of jaxrs client by addition of interfaces around the apache client classes
2016-02-24 18:04:49 +01:00
1ba0ae3960
Support inline match URL references, per Simone's requast for the next
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connectathon
2016-02-23 13:12:30 -08:00
fd2eaff12d
Fix javadoc
2016-02-19 06:53:23 -05:00
6ce4056f7a
Fix #298 - Don't handle /metadata for methods other than GET
2016-02-19 06:40:07 -05:00
43bdfc0345
Fix #297 - Resource not populated in ActionRequestDetails for validate method
2016-02-19 06:21:05 -05:00
4975d212fa
Add userdata map to interceptors which can be passed around
2016-02-17 08:05:55 -05:00
9b304748ad
Work on terminology service
2016-02-16 21:29:00 -05:00
c1141eb18f
Reorganize how search param prefixes are handled and modelled based on new DSTU2 style prefixes
2016-02-15 10:05:39 -05:00
23f9292b50
Add support for comments in XML and JSON parsing/encoding
2016-02-08 22:05:17 -05:00
961cde41bd
Merge branch 'master' of github.com:jamesagnew/hapi-fhir
2016-02-08 14:22:20 -05:00
f21851099c
Version bump
2016-02-08 13:59:09 -05:00
d93c54c0aa
Version bump to 1.5
2016-02-06 14:18:56 -05:00
0ff111be87
Fix #291 - Don't fail the server for untyped list returns
2016-02-06 14:18:04 -05:00
f9e4398c89
fix pom
2016-02-05 14:59:10 +01:00
68b816dce7
Prepare for 1.4 release
2016-02-03 16:56:32 -05:00
e0e52f96c6
Version bump to 1.4 (finally!)
2016-02-03 15:25:32 -05:00
def7fc93e0
Merge pull request #289 from petromykhailysyn/master
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ServletContextPath can start with servletPath, it should be taken into consideration
2016-02-03 14:06:18 -05:00
93d9011691
Fail server if conditional param is not of type String
2016-02-02 07:11:18 -05:00
32daeb6f58
Switch DSTU2.1 to DSTU3 per FMB's decision
2016-02-01 08:55:58 -05:00
914f615b8e
Merge branch 'master' of github.com:jamesagnew/hapi-fhir
2016-01-28 11:35:16 -05:00
ecc48317f2
Version bump dependencies
2016-01-28 08:31:19 -05:00
00f0ea4a0b
Merge branch 'master' of github.com:jamesagnew/hapi-fhir
2016-01-27 08:36:10 -05:00
1bc35f1ba3
Support modifiers on token parameters
2016-01-27 07:05:41 -05:00
a7313023f7
Revert "If servletContextPath is not root (application is deployed not to the root) we should take it into consideration while determinating server base."
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This reverts commit 0e3bb5a797
2016-01-26 17:02:24 +02:00
83823aad35
ServletContextPath can start with servletPath, now it's taking into consideration while determinate contextIndex.
2016-01-26 16:29:16 +02:00
7ed14d538a
Remove warning
2016-01-24 14:53:40 -05:00
0e3bb5a797
If servletContextPath is not root (application is deployed not to the root) we should take it into consideration while determinating server base.
2016-01-22 10:42:36 +02:00
0f835b5e55
Exposing http client request pool max parameters on restful client factory:
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* added setters on restful client factory to allow changing max total connections and max connections per route for pooling http connection manager
* added defaults for max total connections and max connections per route on restful client factory interface
2016-01-20 11:50:49 -05:00
1ba03f4a9b
Fix #283 - Remove servlet 3.0 dependency where possible
2016-01-20 08:11:03 -05:00
944afc2785
Add better constructors for date types
2016-01-20 07:40:57 -05:00
f9960b22d5
Clean up validation
2016-01-15 18:44:28 -05:00
d290110126
Fix validation
2016-01-15 18:02:20 -05:00
589059256f
Correct issues uncovered during connectathon
2016-01-11 07:42:13 -05:00
8dadc77420
create jax-rs client
2016-01-08 12:01:56 +01:00
b6d3a003d3
move client api-classes into api package
2016-01-08 11:47:00 +01:00
1271c36d1b
create a jax-rs client
2016-01-08 10:50:04 +01:00
c1afb4f54d
Get overlay working for DSTU2.1
2016-01-07 15:04:56 -05:00
0c8c414784
Try to get travis working
2016-01-07 11:17:54 -05:00
479da24cfb
Bump license files
2016-01-07 08:50:07 -05:00
a54cb06c03
More travis cleanup
2016-01-06 14:02:20 -05:00
56620eebfb
Clean up testpage-overlay to work with DSTU2.1
2016-01-06 08:49:24 -05:00
2e434650ea
Fixed to testpage overlay for DSTU2.1
2016-01-05 17:02:37 -05:00
b7aa4e15b9
Merge branch 'master' of github.com:jamesagnew/hapi-fhir
2016-01-05 08:31:24 -05:00
59da230702
Improving validation documentation
2016-01-05 07:20:54 -05:00
7005cd52d9
Performance tweaks to the validator and get the DSTU2.1 endpoint working
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with validation
2016-01-04 17:57:00 -05:00
685bd9345b
Add request/response validator interceptors
2016-01-03 21:52:11 -05:00
5789db8743
Remove dependency on cobertura at compile time
2016-01-02 10:55:52 -05:00
c8365ab566
Fix build
2016-01-01 23:18:44 -05:00
718a26671f
DSTU2.1 structures working
2016-01-01 16:59:19 -05:00
056900f324
Lots more work on DSTU2.1 structures
2015-12-30 11:27:12 -06:00
7692e5d714
More work on DSTU2.1 structs
2015-12-22 09:32:06 -05:00
2469aa3725
Lots of DSTU2.1 structure work
2015-12-20 23:35:47 -05:00
aaf85f2323
Lots of work on DSTU2.1 structures
2015-12-20 09:29:52 -05:00
6ac62a5b46
Merge branch 'master' into hl7org_dstu21
2015-12-15 20:33:31 -05:00
3005c9a766
Still working on unit tests
2015-12-15 09:11:01 -05:00
22ff1db183
Work on tests
2015-12-15 07:14:21 -05:00
2b0a800d98
travis....
2015-12-14 22:44:05 -05:00
c8535b72b6
More travis
2015-12-14 22:34:53 -05:00
0bf5172de6
More travis work
2015-12-14 22:28:03 -05:00
b2a9836cda
More logging to try and figure out the travis failures
2015-12-14 22:12:54 -05:00
a623003a56
Fix #240 - Support target resource type in server _include and _revinclude values
2015-12-14 21:50:35 -05:00
d95bd269c0
Correctly encode value[x] field names when the datatype is a profiled type such as markdown
2015-12-14 21:04:27 -05:00
2eaa1eddae
Fix compile
2015-12-14 18:22:21 -05:00
9ef0498775
Merge branch 'master' of github.com:jamesagnew/hapi-fhir
2015-12-14 10:56:33 -05:00
97d6d09663
Work on #240 - Not yet working in JPA
2015-12-14 08:17:33 -05:00
68bb244328
Lots of work on new structures
2015-12-13 22:44:41 -05:00
117f9eb977
Merge branch 'master' of github.com:jamesagnew/hapi-fhir
2015-12-10 08:24:30 -05:00
85ec9d9264
Work on 2.1 structures
2015-12-10 08:24:12 -05:00
0a0daedcfd
Still not working DSTU2.1
2015-12-09 22:49:02 -05:00
67eb06665e
Work on test indexing
2015-12-03 22:41:37 -05:00
8ed9ca83af
Fix build
2015-12-03 21:52:40 -05:00
547b5290a4
Update resource defs
2015-12-01 18:35:24 -05:00
4398040451
Add count(int) method to fluent client search
2015-12-01 10:22:50 -05:00
07078e4ce3
Add GZip support to client and server for client-to-server uploads
2015-11-29 15:03:28 -05:00
d47e0e5e77
Add DSTU2.1 resources
2015-11-29 11:43:09 -05:00
e6b47855e6
Merge branch 'master' of git://github.com/petervanhoute/hapi-fhir into petervanhoute-master
2015-11-27 14:59:53 -05:00
00be143207
Merge branch 'master' of github.com:jamesagnew/hapi-fhir
2015-11-26 07:03:14 -05:00
a046afe1d0
Merge pull request #259 from nrpeterson/boundcodeableconcept-serialization
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Add serializability for BoundCodeableConceptDt
2015-11-26 06:59:14 -05:00
14e326c2bd
Merge branch 'master' of github.com:jamesagnew/hapi-fhir
2015-11-26 06:57:08 -05:00
9c9ffe1fb7
Remove dependency on JDK 7
2015-11-26 06:56:52 -05:00
1fe3bb9ff0
Updates from DevDays
2015-11-23 06:13:02 -05:00
13b3601843
Make IBoundCodeableConcept and IValueSetEnumBinder extend java.io.serializable; add a test to verify that MaritalStatusCodesEnum in DSTU2 is now serializable.
2015-11-20 12:15:31 -08:00
c78be081ef
Add CLI test
2015-11-20 10:30:10 +01:00
2f12c9ed01
Bump version to 1.4-SNAPSHOT
2015-11-15 20:11:05 -05:00
f9f33f059b
Version bump to 1.3
2015-11-15 12:53:02 -05:00
6fd5aecec7
Fix #250 - Honour Accept: text/xml and Accept: text/json
2015-11-05 07:32:33 -05:00
3fc7a16735
Fulltext searching works
2015-11-02 08:12:36 -05:00
63db1b646f
test in weblogic: fix interceptor + stateless on abstract
2015-10-30 11:35:11 +01:00
2cc88d76eb
Cleasn up JPA interceptors
2015-10-29 16:44:51 -04:00
d3685e72ba
Fix #241 and fix #247 - Don't encode UUID IDs on resources, and preserve
...
bundle type when retrieving pages
2015-10-29 15:38:19 -04:00
367163c46a
fix return url
2015-10-29 15:55:37 +01:00
a262bf64d0
fix paging
2015-10-29 15:54:09 +01:00
65598c200e
Merge branch 'master' of github.com:jamesagnew/hapi-fhir
2015-10-28 07:39:18 -04:00
5a2ee77142
Parser (XML and JSON) shouldn't encode an ID tag in resources
...
which are part of a bundle when the resource has a UUID/OID
ID.
2015-10-26 22:47:06 -04:00
69658ab754
Merge branch 'master' of github.com:jamesagnew/hapi-fhir
2015-10-23 08:22:40 -04:00
eea406e10e
ResourceReferenceDt#loadResource(IRestfulClient) did not
...
use the client's read functionality, so it did not
handle JSON responses or use interceptors. Thanks to
JT for reporting!
2015-10-23 08:21:25 -04:00
e93f7542a5
Remove unused check
2015-10-23 07:22:15 -04:00
8d515feb6d
Fix #242 - Allow compartment and read method to coexist for server
2015-10-21 11:58:19 -04:00
5edd290013
More work on JPA server transactions
2015-10-20 10:52:29 -04:00
ae416dcd62
Improve nexted search/read handing in transactions in JPA server
2015-10-20 10:35:18 -04:00
6729ea0479
Work on support for transaction searches with paging in JPA
2015-10-19 20:21:06 -04:00
e9d18af5d9
Bump library versions
2015-10-14 18:11:52 -04:00
0430eb1626
Merge branch 'master' of github.com:jamesagnew/hapi-fhir
2015-10-13 12:13:43 -04:00
6d93cbcaae
Get content search working correctly
2015-10-13 09:18:34 -04:00
a2bf374470
Merge pull request #239 from botunge/master
...
Make dependencies truly optionel and clean up android pom.
2015-10-12 20:06:24 -04:00
81a90ecca8
Temporarily restore file
2015-10-12 20:05:21 -04:00
cb886c2975
Remove unused BeanUtils
2015-10-12 19:54:23 -04:00
b827823004
Improve efficiency of JPA queries with _lastUpdated
2015-10-12 09:32:25 -04:00
16989435b0
Don't export a _format on paging links if the request didn't have one
2015-10-09 17:42:45 -04:00
588016e406
Merge branch 'master' into fulltext
2015-10-09 09:15:48 -04:00
4dbd180cf6
Clean up testing
2015-10-08 17:38:14 -04:00
1afaea81d6
rename jax-rs classes + add unit tests to example project
2015-10-08 09:08:22 +02:00
7f910974a2
create seperate response and server interfaces and classes for servlets and jaxrs
2015-10-07 17:11:16 +02:00
ad868038a8
Work on Lucene searching
2015-10-07 09:01:32 -04:00
9fef4f6bab
Allow valueset operations to work against type in JPA
2015-10-06 18:53:09 -04:00
828a7966c7
some more test
2015-10-06 22:13:18 +02:00
7ad5d6bba8
Move dependency on java.util.jar and java.beans to optional dependency
...
Move some more dependencies to optionel dependencies and write more test
for different base methods.
2015-10-06 22:13:15 +02:00
b62eb1168c
Allow server operations to work at the type level
2015-10-06 11:45:49 -04:00
80575b5380
Generic client now allows search by URL
2015-10-05 15:30:30 -04:00
91afb99b7b
make sure hapi fhir base creates sources jar
...
In order to streamline build of android jar with dependencies all
dependencies should publish a sources jar also.
2015-10-05 21:18:59 +02:00
43aad1eb98
Properly support chains in JPA conditional URLs
2015-10-04 15:38:58 -04:00
e040ef3f43
Merge remote-tracking branch 'upstream/master'
2015-10-04 21:07:46 +02:00
64b70d412a
move schematron validator to sub package
2015-10-04 21:05:55 +02:00
f4f57fd480
Make dependencies truly optionel + clean up / minimize android build
...
both Phloc and Schematron was not truly optionel since they was referred
from different files. So the references has been moved to a factory and
ObjectUtil extended for some of the missing methods, where Schematron
was used. Android pom file is cleaned so that all artifcates are build
using the same base configuration and then schematron, phloc and some
server components have been removed from artifact to minimize android
artifacts.
2015-10-04 21:05:30 +02:00
48d56b4722
Fix connectathon discovered issues
2015-10-03 23:52:30 -04:00
c666b9c196
Fix compile issues
2015-10-03 16:11:47 -04:00
e7e8f8dd81
Use correct status codes for failed deletes, and support multi delete in
...
JPA
2015-10-02 18:18:54 -04:00
aa32e6f0a9
Improve ValueSet operations in JPA
2015-10-02 12:37:56 -04:00
b4df6f9612
add server using jaxrs
2015-10-02 11:27:21 +02:00
9560ab8dd2
Remove server code from android client and make android client smaller
2015-10-02 00:13:19 +02:00
119a4f36d9
Add error checking and better handling for match URLs in JPA server
2015-10-01 16:54:34 -04:00
900c93949a
Work on subscriptions, and correct indexing of codes in JPA
2015-10-01 08:56:17 -04:00
f9e4a3e1b5
Fix #233 - elementQuantity gets incorrectly encoded as elementDuration
2015-09-29 19:41:31 -04:00
ca8c257833
Support lastupdate filtering and sorting on JPA everything operation
2015-09-29 13:24:33 -04:00
1cc6a05273
FIx validation for resources using v2 tables
2015-09-29 10:51:36 -04:00
9492744018
Work on subsciprions
2015-09-28 09:06:57 -04:00
51a046ea26
Handle sort by number, uti and token
2015-09-25 16:53:22 -04:00
1361e69177
Respect server default encoding if an Accept header is received which
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indicates equal weight for both encodings
2015-09-24 17:52:52 -04:00
072c1ece87
Send Accept header on client requests, and allow string responses in
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QuestionnaireResponse validator for questions of type OPENCHOICE
2015-09-24 13:40:07 -04:00
bd4d7e276f
Fix tests
2015-09-24 10:10:05 -04:00
70eff0dc7f
Improve error message when $meta-add and $meta-delete are called with no meta element in the
...
input parameters. Also improve OperationOutcome rendering in narrative generator.
2015-09-24 08:36:25 -04:00
7e6844be56
Improve error message when JSON parser finds an object where an array is expected
2015-09-24 07:27:43 -04:00
a15ed8e944
Work on subscriptions, and correct an issue with DateRangeParam where comparators get ignored
2015-09-23 08:36:11 -04:00
ec8b3b68f6
Work on subscription
2015-09-22 08:06:23 -04:00
04c2cce13f
Start working on JPA subscriptions
2015-09-21 09:08:19 -04:00
70e942e9f8
Version bump to 1.3-SNAPSHOT
2015-09-19 11:00:57 -04:00
00bf8231ba
Upgrade coveralls plugin
2015-09-16 14:02:56 -04:00
31934ff582
Version bump to 1.2
2015-09-16 07:09:03 -04:00
73121e222c
Add tests
2015-09-15 14:11:55 -04:00
3f7e4374b7
Merge branch 'master' of github.com:jamesagnew/hapi-fhir
2015-09-15 09:09:29 -04:00
d0bac3d419
Work on CLI tool
2015-09-13 22:06:31 -04:00
780fc871cb
It should not be possible to search for deleted resources using the _tag, _id, _profile, or _security search parameters
2015-09-13 09:42:41 -04:00
48ee2cbee8
JPA server now correctly suppresses contents of deleted resources
...
in history
2015-09-12 09:45:12 -04:00
8c9e4ff39a
Adjust the checkstyle location to play nice on Win
...
Removed the file:// prefix on the checkstyle config location, this is
needed for the site build to work on Windows. I've tested this on Linux,
though not as thouroughly.
2015-09-12 16:46:29 +12:00
847b382ee8
Add tests
2015-09-10 07:51:13 -04:00
8120ab2228
Merge branch 'master' of github.com:jamesagnew/hapi-fhir
2015-09-09 22:46:48 -04:00
437625505c
Add some tests and some cleanup of unused code
2015-09-09 22:41:10 -04:00
1961042d11
Remove useless warning
2015-09-09 16:16:18 -04:00
2a3088f2e2
Add tests
2015-09-09 16:08:21 -04:00
aa8334a99a
Merge remote-tracking branch 'upstream/master' into osgi-pull-request
2015-09-09 08:41:45 -04:00
9de81a1bd8
Providers can bedynamicaly registered at runtime
2015-09-09 07:01:15 -04:00
daedf63c46
Decouple RestfulService and ServerConformanceProvider to avoid cycle in
...
Spring wiring
2015-09-09 07:01:03 -04:00
c534fb9604
Hopefully tests should pass now - Not using profile datatypes in encoded
...
choice names has been a pain!
2015-09-08 14:00:11 -04:00
69596abdc9
Once more fixing the build
2015-09-08 10:31:47 -04:00
a733ad0949
Fix build
2015-09-08 08:58:23 -04:00
403fe28bd8
FIx build
2015-09-08 08:32:33 -04:00
bb5816d8e9
Fix second part of #216 - Correctly encode choice elements on profiled datatypes
2015-09-08 08:01:51 -04:00
9af3fcf02d
Allow browser requetsts to force a raw response
2015-09-07 21:52:35 -04:00
08633066c6
Fix #216 - Unexpected attributes when parsing composite elements should be logged
2015-09-07 10:08:11 -04:00
abdfb50b40
Fix a few tests and don't crash on old Woodstox
2015-09-04 13:59:57 -04:00
773608f860
Validation documentation
2015-09-04 08:22:06 -04:00
8b20f3a77d
Sync to 1.0.0 FHIR definitions
2015-09-03 08:07:43 -04:00
97e6073665
Support URI (and prepare for lat/lon search params) in JPA server, and
...
don't store duplicate tags
2015-09-01 17:02:35 -04:00
bac4c4a2e9
Fix #214 - added totalResults to the hash of valid dstu1 keywords
2015-09-01 09:58:25 -04:00
f04147dcfd
Fix compile problem
2015-09-01 07:07:45 -04:00
e8f5451cc9
Fix a few issues found by FindBugs
2015-09-01 07:05:27 -04:00
08b19f55ad
Merge pull request #213 from SingingTree/javadocs_reference_github
...
Update Javadocs to reference Github docs
2015-08-31 16:18:38 -04:00
a9f978a8a2
Udate to latest DSTU2 definitions
2015-08-31 08:20:24 -04:00
eb7b405419
Update Javadocs to reference Github docs
...
Several Javadoc comments still reference the old Sourceforge based
documentation. These have been updated to point to the Github based
documentation where relevant, or removed in one case where the Github docs
do not appear to have such a section.
2015-08-31 18:46:05 +12:00
98a0d5a07a
Delete old deprecated classes
2015-08-28 18:19:16 -04:00
eaa2519696
iAdd some tests
2015-08-28 18:00:32 -04:00
110abf7cb2
Switch from Cobertura to JaCoCo
2015-08-28 17:06:56 -04:00
bd13b53099
Fix #212 - Dont accept invalid IDs but do accept IDs starting with a
...
number
2015-08-28 15:36:56 -04:00
073fa47807
Add support for _include:recurse behaviour
2015-08-27 19:44:51 -04:00
1577859340
Fix build
2015-08-24 18:46:07 -04:00
2733812535
Fix build
2015-08-24 18:39:49 -04:00
11c5ab7892
More auto qualify resource references
2015-08-24 18:33:28 -04:00
83a57f8e7c
Auto qualify resource IDs
2015-08-24 18:21:34 -04:00
a5a18b9a14
DateTimeDt now returns an instance of itself when the TimeZone is set.
2015-08-24 16:48:00 -04:00
df4d371edc
Add profile and security params for generic search
2015-08-24 15:23:28 -04:00
bec43b3fdc
Fix tests
2015-08-24 08:29:02 -04:00
60339d6f93
Fix #209 - _revinclude results from JPA server should have a Bundle.entry.search.mode of "include" and not "match". Thanks to Josh Mandel for reporting!
2015-08-23 22:25:25 -04:00
11376024fa
Fixing test related to summary and elements mode
2015-08-23 21:51:46 -04:00
44ac164eca
Work on #125 - Support _summary and _elements
2015-08-23 13:29:57 -04:00
7645c240f4
Get instance validator working across FHIR versions
2015-08-20 15:27:24 -04:00
ddc66d3ed0
Add support for $validate-code in JPA server
2015-08-20 14:27:19 -04:00
11f5aeebd9
Clean up the build and hopefully close #206
2015-08-19 11:49:00 -04:00
6941f92090
Fix #207 - Confusing error message parsing invalid contained resources
2015-08-17 20:46:56 -04:00
c2fba2ce21
More work on interceptors
2015-08-17 18:35:51 -04:00
bb1e8b9ddd
Last commit broke cobertura
2015-08-17 15:54:00 -04:00
ac564a54d6
Documentation cleanup
2015-08-17 07:57:20 -04:00
330dbde983
Add new interceptor hook for auditing
2015-08-16 22:09:01 -04:00
89a7750bf4
Start working on action interceptor framework
2015-08-14 17:05:07 -04:00
c859c9da91
Add withId(long) to fluent client read() method
2015-08-14 15:43:35 -04:00
2766af2693
Update definitions and correctly handle exceptions in
...
incomingRequestPreProcessed method in server interceptors
2015-08-13 16:59:10 -04:00
b28dba3540
Merge branch 'dstu2_final' of github.com:jamesagnew/hapi-fhir into dstu2_final
2015-08-09 17:20:30 -04:00
12735a1446
Handle contact search params better
2015-08-09 17:17:53 -04:00
24634880db
Update for QA version of DSTU2
2015-08-09 11:18:04 -04:00
b36e4e5841
Merge branch 'master' into dstu2_final
2015-08-06 18:07:34 -04:00
c838d651dd
Fix fluent client search call so that it can be mocked with Mockito
2015-08-06 18:06:32 -04:00
43dd081098
Fix compile issues and keep working on android build
2015-08-06 13:13:03 -04:00
af9c8faf89
Don't crash if resrouce references being parsed have unexpected child
...
elements
2015-08-06 10:50:36 -04:00
137a2cf7ec
Enhancements to Android build
2015-08-06 10:15:58 -04:00
63defc2f30
Merge branch 'master' into dstu2_final
2015-08-05 13:29:20 -04:00
fd91ce76ce
Fix #192 - Correctly unescape search parameters in the server when they
...
have a trailing comma or an escaped backslash
2015-08-05 12:57:04 -04:00
5b09a3d2b6
Add trasnaction BATCH support to JPA
2015-07-31 09:29:25 -04:00
d9d192cc04
Merge branch 'master' into dstu2_final
2015-07-30 22:34:45 -04:00
ab2129d651
Implements support for _tag in JPA server and client
2015-07-30 07:47:37 -04:00
75798cf9fe
Use HttpServletRequest.getContextPath to get the context path
2015-07-27 11:19:29 -04:00
e457366ffa
Start work on upgrading DSTU2 to QA version
2015-07-25 11:56:47 -04:00
f1d7fb7b8a
Cleanup
2015-07-21 11:46:16 -04:00
f2bf199ac7
Fix build and sync RI
2015-07-21 10:58:02 -04:00
56a4c1b04b
Add serialization support and fix build regression
2015-07-21 09:45:53 -04:00
48917684fd
Finish off #152
2015-07-21 08:28:40 -04:00
99e92d8fca
Operations in server generated conformance statement should only appear once per name, since the name needs to be unique.
2015-07-19 19:17:39 -04:00
a774a654ce
Property document OperationDefinitions generated automatically by server
2015-07-19 11:10:46 -04:00
a35d20b999
Fix #158 - Don't encode empty tags
2015-07-18 17:35:54 -04:00
5a450227b2
Fix unit test issues
2015-07-18 17:05:10 -04:00
3bff020c54
Add exception pre processing method to server interceptors
2015-07-18 16:31:32 -04:00
626f4677e7
Fix #198 - Sorting should only sort on the individual parameter searched on, not all params of the same type
2015-07-18 15:29:24 -04:00
57ee1fe220
Fix unit tests failing due to OperationDefinition changes
2015-07-18 14:43:59 -04:00
41283d4ed4
Add $get-resource-counts operation to JPA server
2015-07-17 18:28:47 -04:00
ddbe79cb86
For #126 - Don't use BoundCodeableConcept for empty enums
2015-07-17 08:34:44 -04:00
3bdf846a3d
Improve error messages in JPA server
2015-07-16 22:47:41 -04:00
2fc0d4c7a2
Clean up exception handling in server, and add QuestionnaireAnswers validation for JPA server
2015-07-16 20:16:51 -04:00
3bba0c0425
Add validation module for QuestionnaireAnswers
2015-07-15 17:28:12 -04:00
818c40498c
Site updates
2015-07-15 08:37:56 -04:00
901c5c29cf
Version bunp for 1.2
2015-07-14 18:08:06 -04:00
3fa7c54526
Tag 1.1 release
2015-07-13 10:31:02 -04:00
350028be73
Implement meta operations in client
2015-07-10 17:36:55 -04:00
c22aa14d29
Clean up the validation framework and integrate the QuestionnaireAnswers
...
validator
2015-07-10 16:05:40 -04:00
d5b99c2c10
Fix broken build
2015-07-08 22:27:49 -04:00
3bfecb27a8
Update RI structures
2015-07-08 17:57:53 -04:00
373859c36c
Fix regression
2015-07-07 18:18:11 -04:00
ad0c51f600
Rename DAO classes per request from Ismael Sarmento Jr
2015-07-07 17:41:59 -04:00
d20b7e2c94
A few cleanups to allow example resources to commit cleanly
2015-07-07 17:27:10 -04:00
0f76ba81e1
Fix #196 - Support deep chained parameters in JPA. Also add support for
...
Prefer header.
2015-07-07 10:41:07 -04:00
8a86ad5e76
Wide sweeping changes to get RI structures working in server mode
2015-07-05 17:14:15 -04:00
8b65a9aedf
Indicate support for conditional create/update/delete in DSTU2 server conformance statement
2015-06-25 22:22:19 -04:00
af33664e7c
Support _count on JPA search in transaction
2015-06-25 10:32:03 -04:00
75f5b47762
Doc cleanup
2015-06-24 17:42:46 -04:00
dd9f80ecb1
Clean up warnings
2015-06-24 12:26:40 -04:00
da2d4d0497
Stlye issues only
2015-06-24 08:22:05 -04:00
fed9f4d61e
Add unit tests and update healthconnex server
2015-06-23 08:29:13 -04:00
70d4abdf06
Server should include lastUpdated in search responses if one is supplied
...
by the implementation. Also automatically include in this in JPA server
2015-06-22 16:27:08 -04:00
685fa6d164
Code and site cleanup
2015-06-21 22:10:13 -04:00
b48843a128
More work on test coverage
2015-06-21 12:16:33 -04:00
591f16fa9d
Fix cobertura
2015-06-21 00:56:23 -04:00
e9ac63688c
Finally have travis and coveralls working!
2015-06-21 00:48:10 -04:00
71fbfe5214
Add consolidated test package and clean up tests for cobertura
2015-06-20 14:23:34 -04:00
e8c75c5a45
Add support for _lastUpdated parameter in client and JPA server
2015-06-19 17:46:14 -04:00
12f3cfcab8
Merge branch 'master' of github.com:jamesagnew/hapi-fhir
2015-06-18 17:49:54 -04:00
269106074d
DSTU2 server should indicate conformance for transaction operation
2015-06-18 17:49:33 -04:00
d0cffbf8c7
Revert change to make IdDt#isLocal() return true if the base is "urn:". This caused all kinds of regressions and was obviously a bad idea.
2015-06-18 09:00:56 -04:00
James Agnew
sekaijin
Jenni Syed
Sebastien Riviere
hugosoares
michael.i.calderero
Michael Lawley
Jens Kristian Villadsen
Bill Denton
hnnesv
qagwaai
FilipDomazet
Virdulys
Subhro
Phillip Warner
petervanhoute
petromykhailysyn
Matt Blanchette
Nick Peterson
Thomas Andersen
Bryce Van Dyk
de Beaubien, Bill
miantorno