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2910 Commits

Author SHA1 Message Date
James Agnew b07b8b9845 Start adding DEV structures 2014-10-17 18:08:37 -04:00
James Agnew 4f8eec4075 Add an example for #35 - Cookie Interceptor 2014-10-17 16:39:47 -04:00
James Agnew e31970f095 Merge pull request #35 from petromykhailysyn/master 
Added Cookie interceptor.
 2014-10-17 16:29:54 -04:00
James Agnew 79f92e8728 Merge branch 'master' of github.com:jamesagnew/hapi-fhir 2014-10-17 16:03:48 -04:00
James Agnew b2efa07a05 Doc updates 2014-10-17 16:03:33 -04:00
James Agnew d140e0b829 Merge pull request #34 from jjathman/remove-validation-exception 
Fixes #32 - removes new validation API that doesn't use exceptions
 2014-10-17 15:41:21 -04:00
James Agnew cdb1b2d03e Move Vagrant documentation into its own file 2014-10-17 15:23:04 -04:00
James Agnew 47edfb7b01 Almost have versions tests passing 2014-10-17 14:51:45 -04:00
petromykhailyshyn 10c49d2bd3 Added Cookie interceptor. 2014-10-17 12:52:09 +03:00
James Agnew bb0b39627d Unit tests almost all passing 2014-10-16 17:19:27 -04:00
James Agnew 1d29b2b642 Still more versions work 2014-10-16 13:41:57 -04:00
James Agnew dbc07dcb50 More versions work 2014-10-16 11:46:25 -04:00
lmds1 a642745095 Merge branch 'master' of https://github.com/jamesagnew/hapi-fhir 2014-10-16 10:48:58 -04:00
lmds1 5a742a492b added missing resourcetypeenums 2014-10-16 10:48:51 -04:00
James Agnew 287162af91 Fix #33 - Server was incorrectly returning contained resources as 
top-level resources
 2014-10-15 16:46:28 -04:00
lmds1 9f62d18b9f Merge branch 'master' of https://github.com/jamesagnew/hapi-fhir 2014-10-15 15:22:45 -04:00
lmds1 fdd9939d16 added resource type to IResource so all resource subclasses must declare what type they are (to facilitate auditing of resources) 2014-10-15 15:22:42 -04:00
James Agnew b22bcaec32 More cleanup for contained resources 2014-10-15 14:34:14 -04:00
Joseph Athman 2741f1cae5 Fixes #32 
Creates new methods that return a ValidationResult object instead of throwing an exception which requires catching and inspecting the exception itself. Migrating from the old to the new API should be pretty simple as the method calls match quite closely.
 2014-10-15 12:26:30 -05:00
James Agnew 2a9d92df7a Clean up encoding of contained resources so that resources are not 
modified as a part of the encoding
 2014-10-14 14:20:19 -04:00
lmds1 6049df0bfa Merge branch 'master' of https://github.com/jamesagnew/hapi-fhir 2014-10-10 15:42:29 -04:00
James Agnew abecee2766 Some work on supporting multiple versions 2014-10-02 09:54:52 -04:00
James Agnew 507ea9bedf One more windows unit test break 2014-10-01 16:27:47 -04:00
James Agnew c6dcd4b1af Fix broken unit tests on Windows 2014-10-01 16:02:22 -04:00
James Agnew 751face0a6 Argh. Fix to 0.7-SNAPSHOT, not 0.6-SNAPSHOT 2014-09-30 13:16:09 -04:00
James Agnew 1feb69b545 Revert to 0.6-SNAPSHOT version 2014-09-30 11:59:38 -04:00
James Agnew 3eeea9b0fc Merge branch 'tags-set' 2014-09-30 11:58:00 -04:00
James Agnew 24caec9f44 Get tags working as a set instead of a list 2014-09-30 11:57:15 -04:00
jamesagnew 75c5123797 Merge branch 'master' of github.com:jamesagnew/hapi-fhir 
Conflicts:
	hapi-fhir-base/src/changes/changes.xml
 2014-09-29 21:07:01 -04:00
jamesagnew dcccf5553e Return a content-location header on update 2014-09-29 21:05:55 -04:00
t106uhn 686237f970 bump to 0.8-SNAPSHOT 2014-09-26 20:50:36 -04:00
t106uhn 2e89fd7554 fixed compile error with org-apache-commons.StringUtils 2014-09-26 18:38:38 -04:00
James Agnew 0d6eca70a9 Work on #30, still not working though... 2014-09-26 17:16:37 -04:00
James Agnew 1d084fe6b0 Fix #29 - Encoding resources with contained resources caused the parent 
resource to grow with each encode pass.
 2014-09-26 10:58:19 -04:00
James Agnew c362e21997 Add test for contained binary resources. Close #26 fixed by Alexander 
Kley
 2014-09-26 09:37:41 -04:00
James Agnew e4009bcb4a Merge pull request #28 from Cloudyle/issue-#26 
Thanks for the submission! Looks good to me.
 2014-09-26 09:32:35 -04:00
James Agnew 69c5663128 Merge branch 'master' of github.com:jamesagnew/hapi-fhir 
Conflicts:
	hapi-fhir-base/src/changes/changes.xml
 2014-09-26 09:24:28 -04:00
James Agnew 4f4fdfd279 Docs 2014-09-26 09:23:03 -04:00
jamesagnew 4622af7a82 Docs 2014-09-26 07:43:25 -04:00
lmds1 86b5e4acf9 Merge branch 'master' of https://github.com/jamesagnew/hapi-fhir 2014-09-25 11:21:07 -04:00
jamesagnew d159584b43 Don't fail is Woodstox isn't the default StAX parser 2014-09-25 08:35:15 -04:00
akley b380a8f797 Update PraserState.java 
Issue #26: XMLParser doesn't read Binary content from XML. Binary content is discarded during xml parsing, because attribute check of ID is missing in BinaryResourceState.attributeValue(...)
 2014-09-25 10:36:29 +02:00
lmds1 bdad121f01 Merge branch 'master' of https://github.com/jamesagnew/hapi-fhir 2014-09-24 19:09:45 -04:00
lmds1 88e95c1b0a fixed exception handling for auditing interceptor 2014-09-24 19:09:35 -04:00
jamesagnew dd5e442bcb Add an explicit dependency on phloc-commons to fix a build error, thanks to Odysseas Pentakalos for the contribution. 2014-09-24 17:36:59 -04:00
lmds1 8c45f32ce3 Merge branch 'master' of https://github.com/jamesagnew/hapi-fhir 2014-09-24 15:52:57 -04:00
lmds1 e0d160ad7e added AuditingInterceptor and IAuditDataStore with various ResourceAuditors to provide pluggable auditing functionality to FHIR server 2014-09-24 15:52:48 -04:00
James Agnew a610c1cb38 Add client interceptor which adds bearer tokens for OAUTH2 2014-09-24 14:57:37 -04:00
James Agnew 5c0ccaab9a Resources containing entities which are not valid in basic XML (e.g. 
§) will have those
				entities converted to their equivalent
unicode characters when resources are encoded, since FHIR does
				not allow extended entities in resource
instances.
 2014-09-22 16:44:59 -04:00
James Agnew c214f7fe19 Fix #24 - Add a bunch of elements to the automatically generated 
conformance profiles to ensure that they validate against the HL7
schemas.
 2014-09-22 16:27:57 -04:00
jamesagnew 7192c9348a Doc tweaks 2014-09-19 08:52:39 -04:00
James Agnew b67a4cc4e4 Allow read/vread/search using absolute URL - Thanks to Doug Martin for 
the contribution
 2014-09-18 17:13:43 -04:00
James Agnew 06e2b6632d Fix build 2014-09-17 11:43:18 -04:00
lmds1 cb8dca13d2 Merge branch 'master' of https://github.com/jamesagnew/hapi-fhir 2014-09-17 11:36:41 -04:00
James Agnew 62bf2620f1 Properly handle bundle entry summary element 2014-09-17 11:35:57 -04:00
lmds1 4b730cc418 Merge branch 'master' of https://github.com/jamesagnew/hapi-fhir 2014-09-17 11:35:44 -04:00
lmds1 9906b61987 added UserInfoInterceptor to pass user context for auditing, added narratives for Medication Prescription, moved URL into RequestDetails so it's available to interceptors 2014-09-17 11:35:15 -04:00
jamesagnew b316d556b7 Fix unit test 2014-09-17 09:07:01 -04:00
jamesagnew 594b04d838 Merge branch 'master' of github.com:jamesagnew/hapi-fhir 
Conflicts:
	hapi-fhir-base/src/changes/changes.xml
 2014-09-17 08:33:52 -04:00
jamesagnew 1fecb8ad76 Parameter type cleanup from connectathon 2014-09-17 08:32:15 -04:00
James Agnew 83f9c1c6a9 Still working on unit tests 2014-09-16 17:21:04 -04:00
James Agnew 774e38eacc Just logging in unit test 2014-09-16 17:16:03 -04:00
James Agnew 49726fb17c Properly escape characters in narrative blocks 2014-09-16 17:06:48 -04:00
James Agnew e7d2a19ac6 Fix broken build - Thanks Jenkins! 2014-09-16 15:25:20 -04:00
James Agnew af64f1b9e1 Merge branch 'master' of github.com:jamesagnew/hapi-fhir 2014-09-16 12:06:42 -04:00
James Agnew ef57a5f47e Work on #21 - Don't depend on Servlet 3+ APIs 2014-09-16 12:05:44 -04:00
t106uhn f79b7adabd added jetty-http dependancy to allow test case classes to compile in 
eclipse
 2014-09-15 20:40:40 -04:00
jamesagnew 5701572e08 Fix url determination 2014-09-13 12:15:35 -05:00
jamesagnew 1f0f9176fe Work on base server URL determination code 2014-09-13 12:05:57 -05:00
jamesagnew f3ae6cbffd Merge branch 'master' of github.com:jamesagnew/hapi-fhir 
Conflicts:
	hapi-fhir-base/src/changes/changes.xml
	hapi-fhir-jpaserver-uhnfhirtest/.settings/org.eclipse.wst.common.component
	restful-server-example/.settings/org.eclipse.wst.common.component
 2014-09-12 18:57:57 -05:00
James Agnew cdd4b137fb Bump to 0.7-SNAPSHOT 2014-09-11 16:57:45 -04:00
James Agnew 0b6c985f3a Merge branch 'oauth2' 
Conflicts:
 2014-09-11 16:29:08 -04:00
James Agnew 960c89989c Documentation tweaks 2014-09-11 16:28:29 -04:00
James Agnew f388c6df3d Nothing 2014-09-10 14:13:01 -04:00
James Agnew 8a77ac939d Documentation enhancements 2014-09-10 14:12:11 -04:00
jamesagnew 09af35e5d8 Site tweaks for release 2014-09-08 07:51:21 -04:00
jamesagnew 13dd6d5e11 Complete 0.6 2014-09-08 07:41:44 -04:00
James Agnew 6761e9a945 Starting to rework the oauth2 filter 2014-09-04 18:03:19 -04:00
James Agnew f9419ea910 Fix up examples 2014-09-03 18:03:44 -04:00
James Agnew 095945562b Potential #19 2014-09-03 12:57:17 -04:00
jamesagnew 93c54f57fe More work on fixing #19 2014-09-03 09:08:55 -04:00
James Agnew c704aa185d Fix #19 - Now have a whitelist and a blacklist for parameter names 2014-09-02 16:41:01 -04:00
jamesagnew 9217ee28bf Starting work on #19 2014-09-02 08:21:06 -04:00
jamesagnew bda33737f1 Doc updates as suggested by David Hay 2014-09-01 20:05:16 -04:00
jamesagnew e7f34e8dbb Check compartment support in 2014-08-29 13:05:04 -04:00
James Agnew ce99ee8324 Whitespace 2014-08-28 17:42:35 -04:00
James Agnew a8be093b1f Use better valueset enums for SecurityEvent's values 2014-08-28 12:58:13 -04:00
James Agnew 4d426cb2b2 Fix resource reference encode order 2014-08-28 09:47:59 -04:00
James Agnew 46fbfeb66e Fix encoding issue on narrative blocks 2014-08-28 09:44:04 -04:00
jamesagnew d205075e35 More validator work 2014-08-28 07:53:41 -04:00
James Agnew c75c37d24d Rename SecurityEvent.Object to SecurityEvent.ObjectElement 2014-08-27 12:01:46 -04:00
James Agnew 9a58e2e56e Close #14 - HAPI will now not ignore _id parameter when choosing a 
backing method
 2014-08-27 11:34:13 -04:00
James Agnew 5d2d6f410f Merge branch 'master' of github.com:jamesagnew/hapi-fhir 2014-08-27 10:37:19 -04:00
James Agnew f549cd5cc4 Unit test for #14 - Doesn't pass yet though 2014-08-27 10:36:56 -04:00
jamesagnew bfd6329303 Performance improvements 2014-08-27 08:55:00 -04:00
James Agnew 794db6a141 Document interceptor framework 2014-08-26 18:18:00 -04:00
James Agnew 9bb10a5968 More tweaks 2014-08-26 16:23:56 -04:00
James Agnew 812870f5dc Make this a bit easier to read 2014-08-26 16:22:43 -04:00
James Agnew f5823a8e2f Server logging interceptor enhancements 2014-08-26 16:10:27 -04:00
James Agnew 84c479927e Add test for #11 2014-08-26 10:13:35 -04:00
James Agnew faa28cb825 Fix unit test, should close #13. Our hudson server is temporarily 
offline and I need to do a better job of manually running the tests
until it is back!
 2014-08-26 10:04:26 -04:00
jamesagnew 9413bfa47b Correctly parse List resource 2014-08-26 08:10:15 -04:00
jamesagnew e6d6ec88b2 Fix unit test 2014-08-25 21:53:21 -04:00
James Agnew 2cad32aa08 Detect invalid read method 2014-08-25 17:07:02 -04:00
jamesagnew d01f43e4b3 Add server interceptor layer as well as starting work on property file for versions 2014-08-25 09:11:28 -04:00
jamesagnew 8d462f3cda Add validator support 2014-08-23 16:40:26 -04:00
James Agnew 3808f95f6a Start working on server interceptors 2014-08-22 19:15:49 -04:00
jamesagnew ab17c9f3d1 Let server return profile info if configured to do so 2014-08-21 00:34:19 -04:00
jamesagnew 731d369be0 Improve documentation on exception handling for servers 2014-08-20 22:46:15 -04:00
James Agnew 45253cba5d Eclipse settings 2014-08-20 19:21:41 -04:00
James Agnew 1ec49a4f80 Merge branch 'master' of github.com:jamesagnew/hapi-fhir 
Conflicts:
	hapi-fhir-base/src/main/java/ca/uhn/fhir/rest/server/RestfulServer.java
 2014-08-20 15:24:39 -04:00
James Agnew 47c522ac6f Exception enhancements 2014-08-20 15:22:25 -04:00
jamesagnew f8a5acfed9 Exception enhancements 2014-08-20 09:01:09 -04:00
jamesagnew 71e6efbc31 Fix resource reference encoding for JSON parser - Thanks Tommy Nguyen for reporting! 2014-08-20 07:48:51 -04:00
jamesagnew 6bc9140def Fix unit test failure 2014-08-19 09:12:25 -04:00
jamesagnew 598eec53ed Add model visitor, and allow bundles to have categories (as allowed in the spec) 2014-08-19 07:48:06 -04:00
jamesagnew fd41bafa82 Allow bundle as param in transaction method 2014-08-17 22:58:30 -04:00
jamesagnew 8078452f78 Lots more documentation and let users interact with link self/search 2014-08-16 17:46:30 -04:00
James Agnew d67a29a366 Unit tests 2014-08-15 15:55:39 -04:00
jamesagnew d5c6623da0 Start adding ability to override fields in extended definition classes 2014-08-15 09:19:07 -04:00
James Agnew 901ce12e8e Start adding view generator 2014-08-13 18:16:34 -04:00
James Agnew 04b4d5acb7 Server sending some named queries to non named query method 2014-08-13 16:43:54 -04:00
James Agnew 408114235f Start server profiles 2014-08-12 17:22:05 -04:00
James Agnew 0ff847ac21 Fix failing unit tests 2014-08-12 12:27:51 -04:00
James Agnew d0edc03f14 Linked resources in server now correctly returned 2014-08-12 11:04:41 -04:00
jamesagnew e2b9b3318d Add OperationOutcome narrative template 2014-08-11 09:09:01 -04:00
jamesagnew 04bc96ff8e Merge branch 'master' of github.com:jamesagnew/hapi-fhir 2014-08-09 12:18:54 -04:00
jamesagnew 3e2cfcd02d Doc updates 2014-08-09 12:18:47 -04:00
James Agnew 2ede952342 Fix up CORS support 2014-08-08 17:40:43 -04:00
James Agnew 8149df964e Annotation client will not return incorrect resource types 2014-08-08 15:15:10 -04:00
James Agnew b43b6c6d2f Fix #6: Allow update operation to create a resource if it doesn't 
already exist
 2014-08-08 14:07:03 -04:00
jamesagnew e17af44a09 Add _language search support 2014-08-08 08:34:28 -04:00
jamesagnew ba3bc70eae Fix CORS support 2014-08-08 07:33:12 -04:00
James Agnew 95f5031251 Documentation enhancements 2014-08-07 18:41:33 -04:00
James Agnew 4ba4226dad Merge branch 'master' of github.com:jamesagnew/hapi-fhir 2014-08-07 12:18:38 -04:00
jamesagnew deef33317d Annotation documentation updates 2014-08-07 08:27:52 -04:00
jamesagnew 0b7cfec06b Merge branch 'master' of github.com:jamesagnew/hapi-fhir 2014-08-06 09:05:21 -04:00
jamesagnew f36be04168 Typo edits 2014-08-06 09:05:01 -04:00
James Agnew 2c44a4f76e Correctly handle contained resources in client 2014-08-05 17:06:35 -04:00
James Agnew aef7ea5e9f Correctly encode JSON composite elements with extensions 2014-08-05 14:57:53 -04:00
James Agnew f29349f537 Improve conformance provider documentation 2014-08-05 13:15:08 -04:00
James Agnew 1793f6d9ab Fix #4- Create operation should return HTTP 200 2014-08-05 10:46:46 -04:00
jamesagnew 33d667d448 Doc updates 2014-08-05 07:55:58 -04:00
jamesagnew cac3306c64 Merge branch 'master' of github.com:jamesagnew/hapi-fhir 2014-08-01 07:35:59 -04:00
jamesagnew 9d4eff967e Doc updates 2014-08-01 07:35:44 -04:00
James Agnew fa3bd7f25d Start adding OpenID support 2014-07-31 18:06:04 -04:00
James Agnew 0ba7a63803 Allow repeatable prarmater values 2014-07-30 17:43:15 -04:00
James Agnew ef10560c76 Version bump to 0.6-SNAPSHOT 2014-07-30 11:58:06 -04:00
jamesagnew 0a57647b17 Tag 0.5 2014-07-30 07:58:57 -04:00
jamesagnew 67fb593146 Finalize 0.5 2014-07-29 22:26:19 -04:00
James Agnew de5aeb5c7a More tests 2014-07-29 17:27:16 -04:00
James Agnew 98d0fe679a Rebuild resource models 2014-07-29 15:59:11 -04:00
jamesagnew 0bc703107c Add suport for composite and sorting to JPA (not yet complete) 2014-07-29 09:10:25 -04:00
James Agnew 318dcfcaaf Contained resource handling improved 2014-07-23 17:02:54 -04:00
jamesagnew 4cd3bdf441 A few fixes and additions to the fluent client, as well as fixing a bug on extension encoding (null extensions were still being encoded) 2014-07-23 09:15:07 -04:00
James Agnew 622e528f43 Lots of documentation updates 2014-07-22 18:12:01 -04:00
James Agnew efb14397df Merge branch 'master' of github.com:jamesagnew/hapi-fhir 
Conflicts:
	hapi-fhir-base/src/changes/changes.xml
 2014-07-22 14:25:59 -04:00
James Agnew e53aaf0950 Add content-disposition header for binary resources 2014-07-22 14:25:33 -04:00
jamesagnew af3c35cbc0 More API cleanup and documentation 2014-07-22 09:14:02 -04:00
James Agnew fc74cda994 Clean up examples and unit tests to use new parameter types 2014-07-21 18:37:08 -04:00
James Agnew 063e2961ab Fix bug 2- Process Content-Location header in client read invocations 2014-07-21 14:57:37 -04:00
James Agnew 64481185c7 Fixing bug 3- Instance history calls incorrectly get routed to vread 
method
 2014-07-21 14:15:22 -04:00
James Agnew 4713639713 Fix unit tests 2014-07-21 10:17:07 -04:00
jamesagnew ad043a1b79 Merge branch 'master' of github.com:jamesagnew/hapi-fhir 
Conflicts:
	hapi-fhir-base/src/main/java/ca/uhn/fhir/rest/param/ParameterUtil.java
 2014-07-21 09:24:38 -04:00
jamesagnew 6aa3560564 Starting work on consolidating params 2014-07-19 12:10:43 -04:00
James Agnew d15dbd4317 Add interceptor framework 2014-07-18 17:49:14 -04:00
James Agnew 2285d3812e Merge branch 'master' of github.com:jamesagnew/hapi-fhir 2014-07-17 13:02:21 -04:00
James Agnew bb14ad09ea Start preparingh for multiple versions of FHIR 2014-07-17 09:53:52 -04:00
jamesagnew 84af486d51 Tester now suports chained parameters 2014-07-17 08:32:01 -04:00
James Agnew 41f160ed67 Documentation updates and bump to 0.5-SNAPSHOT 2014-07-15 18:36:13 -04:00
jamesagnew 2adaa4a072 Site updates 2014-07-14 08:21:50 -04:00
jamesagnew 568972b098 Release 0.4 2014-07-13 21:59:41 -04:00
James Agnew a2a1035003 More work on tester 2014-07-11 18:27:27 -04:00
jamesagnew 0a7f7d0390 Start with sample code in tester UI 2014-07-11 09:15:38 -04:00
James Agnew 1346802403 reference params should handle resource types properly 2014-07-10 18:17:44 -04:00
James Agnew 4ddaaf0406 Merge branch 'master' of github.com:jamesagnew/hapi-fhir 
Conflicts:
	hapi-fhir-base/src/main/java/ca/uhn/fhir/model/primitive/IdDt.java
 2014-07-10 13:22:58 -04:00
James Agnew 28ebda71e1 Let IdDt clone without being heavyweight 2014-07-10 08:50:51 -04:00
jamesagnew 4d517aa76f Add ability for IDs to be client specified in JPA 2014-07-10 08:17:55 -04:00
jamesagnew 1b7b141396 Tester improvements 2014-07-08 08:44:13 -04:00
James Agnew d3b4a3ad60 Add searching by code text 2014-07-07 18:34:49 -04:00
James Agnew 0484c6509f Display queries properly in UHN implementation 2014-07-07 15:37:23 -04:00
James Agnew b1a602d88b Fix a few unit tests 2014-07-07 12:42:37 -04:00
James 46828030db Deal with max lenghts in search params 2014-07-07 12:15:20 -04:00
jamesagnew cb2b54cb09 Move searches with required parameters to unnamed queries 2014-07-07 09:23:23 -04:00
James add96f2124 Merge branch 'master' of github.com:jamesagnew/hapi-fhir 2014-07-04 17:19:51 -04:00
James 0d13dc886b Allow server to specify its own base 2014-07-04 17:19:33 -04:00
t106uhn 8c1c156e04 testing commit 2014-07-04 16:24:48 -04:00
James 02357bce4d Merge branch 'master' of github.com:jamesagnew/hapi-fhir 2014-07-04 16:18:10 -04:00
James ec2326b1f2 Narrative fixes 2014-07-04 16:17:53 -04:00
t106uhn e0d0574cce commit 2014-07-04 15:59:12 -04:00
t106uhn 8703e81821 commit 2014-07-04 15:49:54 -04:00
t106uhn ca9264061b Merge branch 'master' of https://github.com/jamesagnew/hapi-fhir.git 2014-07-04 14:32:09 -04:00
jamesagnew 93a7c3e5b5 Deprocate confusing get/setId methods 2014-07-04 09:27:36 -04:00
t106uhn e98205a8f2 added new exception 2014-07-03 18:51:18 -04:00
jamesagnew de51a40904 Merge branch 'master' of github.com:jamesagnew/hapi-fhir 2014-07-03 18:35:54 -04:00
jamesagnew ee53c40ff8 Merge branch 'master' of github.com:jamesagnew/hapi-fhir 
Conflicts:
	hapi-fhir-jpaserver-uhnfhirtest/src/main/webapp/WEB-INF/hapi-fhir-server-database-config.xml
	hapi-fhir-jpaserver-uhnfhirtest/src/main/webapp/WEB-INF/templates/tmpl-home-welcome.html
 2014-07-03 18:35:37 -04:00
James 80c13494a8 Fix JSON parser NPE 2014-07-03 18:35:23 -04:00
James ca0929df07 Work on narrative generator 2014-07-03 18:02:14 -04:00
James c811c164b5 Fix unit test 2014-07-03 10:34:55 -04:00
James 0ece666c88 FIx a bunch more unit tests 2014-07-02 18:01:29 -04:00
t106uhn 3e8ea1d4ed Merge branch 'master' of https://github.com/jamesagnew/hapi-fhir.git 2014-07-02 16:20:20 -04:00
James 1c05bcb29c Fix a number of unit tests 2014-07-02 15:24:29 -04:00
jamesagnew 14befcd091 Lots of tester enhancements 2014-07-02 08:57:07 -04:00
jamesagnew f87c50b4b4 Lots of tester work 2014-06-27 18:28:27 -04:00
jamesagnew 50d68d6090 Fix a few parsing issues and add multi server support to tester 2014-06-27 09:05:51 -04:00
jamesagnew 4cd7ff16fb More tester enhancements 2014-06-26 18:06:23 -04:00
t106uhn e576d5ba8f Merge branch 'master' of https://github.com/jamesagnew/hapi-fhir.git 2014-06-26 14:06:26 -04:00
jamesagnew 97e17f9149 Fix code highlighting 2014-06-26 09:06:10 -04:00
jamesagnew 3bc1d35698 Add method which was removed but make it deprocated 2014-06-25 17:22:47 -04:00
jamesagnew acbffecd15 Still trying to get this working with Jenkins 2014-06-25 17:01:32 -04:00
jamesagnew cf63f6bacf FIx unit tests 2014-06-25 13:54:44 -04:00
jamesagnew 1916656e6e Merge branch 'master' of ssh://git.code.sf.net/p/hl7api/fhircode 
Conflicts:
	hapi-fhir-base/src/main/resources/ca/uhn/fhir/rest/server/tester/RestfulTester.html
 2014-06-25 09:56:12 -04:00
jamesagnew 411644c4ff More tester work 2014-06-25 09:49:13 -04:00
jamesagnew 68ea31495c More enhancements for the tester, and merge read/vread methods 2014-06-25 09:07:14 -04:00
jamesagnew e093b23892 Merge branch 'master' of ssh://git.code.sf.net/p/hl7api/fhircode 2014-06-24 08:47:36 -04:00
jamesagnew a51edb83aa More paging work on tester 2014-06-24 08:46:54 -04:00
jamesagnew 875acee2ac Fix failing unit tests 2014-06-23 10:31:02 -04:00
jamesagnew ba09da38b6 Start adding paging support 2014-06-23 09:04:48 -04:00
jamesagnew 4d90955e75 Make resource detection kind of case insensitive (to deal with some healthintersections responses) 2014-06-20 16:54:09 -04:00
jamesagnew f4b8f18a8a Make highlighting optional 2014-06-17 09:18:37 -04:00
jamesagnew 5152f0ba9b Lots more work getting the JPA tester working 2014-06-17 07:48:50 -04:00
jamesagnew bba62b2972 Merge branch 'master' of ssh://git.code.sf.net/p/hl7api/fhircode 2014-06-12 22:21:45 -04:00
jamesagnew 00f7a76ee9 Lots more work on the tester servlet 2014-06-12 22:20:23 -04:00
jamesagnew ab3d656249 Fix some encoding issue for token params 2014-06-12 17:13:49 -04:00
jamesagnew 58bb97e6d0 Merge branch 'master' of ssh://git.code.sf.net/p/hl7api/fhircode 2014-06-12 13:04:30 -04:00
jamesagnew d241df9868 Fix broken test cases 2014-06-12 13:00:31 -04:00
jamesagnew 96986f8829 Lots of cleanup and try to speed up transacitons in JPA 2014-06-12 11:42:28 -04:00
lmds 7ef8640ef7 update restful server to prompt user for credentials on authorization exception if request came from a browser 2014-06-10 15:34:50 -04:00
jamesagnew 04fc0827ef Clean up transactions in JPA 2014-06-06 17:10:31 -04:00
jamesagnew 54078be6e0 Fox a bunch of JPA bugs 2014-06-05 16:01:00 -04:00
t106uhn 9724f1219b Merge branch 'master' of ssh://nacharya@git.code.sf.net/p/hl7api/fhircode 2014-06-03 20:46:57 -04:00
jamesagnew bb86724e12 Allow contained resources to parse and encode correctly 2014-06-03 16:52:21 -04:00
t106uhn 51d16ea92f Merge branch 'master' of ssh://nacharya@git.code.sf.net/p/hl7api/fhircode 2014-06-02 19:34:01 -04:00
jamesagnew dfa88a442c Get history and tags working properly on JPA 2014-06-02 09:07:10 -04:00
jamesagnew be44a2bca2 More work on JPA 2014-05-29 19:00:16 -04:00
jamesagnew a0b120f70e Add history to JPA 2014-05-29 09:17:12 -04:00
jamesagnew 2720e7d273 Lots more JPA improvementsa 2014-05-28 16:07:53 -04:00
jamesagnew adde115c53 working on binary resources 2014-05-28 07:30:40 -04:00
jamesagnew 0ad18c0b77 JPA server is almost working 2014-05-27 18:52:46 -04:00
jamesagnew 245533773f More work to get transactions working 2014-05-26 09:09:54 -04:00
jamesagnew de3fbc9023 Get transaction working in server 2014-05-23 18:29:32 -04:00
jamesagnew 03bf040ef9 More JPA work 2014-05-23 08:37:40 -04:00
jamesagnew 78d712de25 Add transaction operation support, and refactor IdDt into smarter datatype with URL awareness 2014-05-22 18:38:29 -04:00
jamesagnew 30065fdfae More work on transaction method 2014-05-22 10:20:51 -04:00
jamesagnew 62b909ff22 Starting work on transaction interaction 2014-05-22 07:46:24 -04:00
jamesagnew fab60d1ac8 Add deleted bundle entry handling 2014-05-21 18:12:00 -04:00
jamesagnew 1b44e7282d Fix a few issues with JPA 2014-05-21 16:17:45 -04:00
t106uhn 413baed28d fdfdfd 2014-05-21 15:32:15 -04:00
t106uhn df93b808e8 my change 2014-05-21 15:28:12 -04:00
jamesagnew f52ed02fa4 Get all of the tests passing again 2014-05-20 18:28:13 -04:00
jamesagnew 5675237f40 Lots more JPA work, and getting sorting in` 2014-05-20 08:44:55 -04:00
jamesagnew 27dab8a442 More JPA work 2014-05-18 09:40:52 -04:00
jamesagnew 4002cc8824 More JPA work 2014-05-16 17:00:06 -04:00
jamesagnew 610bb542ca Introduce the ability for search parameters to have qualifiers, and add StringParameter to allow exact string matches 2014-05-16 08:34:31 -04:00
jamesagnew 54ab77d51a More JPA work 2014-05-15 17:52:56 -04:00
jamesagnew ca5927880f More work on JPA 2014-05-15 08:08:07 -04:00
jamesagnew ed0902e40f More JPA work 2014-05-14 18:03:17 -04:00
jamesagnew 10dc8b39aa More work on JPA server 2014-05-14 08:55:27 -04:00
jamesagnew 4d0b7ba84c Add QuantityDt and work on JPA server 2014-05-13 18:59:18 -04:00
jamesagnew 0869b1fc14 Site updates 2014-05-12 08:38:06 -04:00
jamesagnew a269d257d3 Bump 0.3 and get all tests passing 2014-05-11 21:46:36 -04:00
jamesagnew fb998a6a32 Fix some bugs on the generic client 2014-05-09 17:54:55 -04:00
jamesagnew b937d5c2dc More work on fluent interface 2014-05-09 08:37:19 -04:00
jamesagnew 86e5948d60 Fluent interface is basically working 2014-05-09 08:32:42 -04:00
jamesagnew e66bd31171 Get fluent client working 2014-05-08 17:52:36 -04:00
jamesagnew 2b683b8f02 Get fluent client working 2014-05-08 07:57:11 -04:00
jamesagnew de926434b8 FIx broken compile 2014-05-07 18:15:08 -04:00
jamesagnew 5ad9e39d7b Fluent interface starting up.. A few bit break right now 2014-05-07 18:14:08 -04:00
jamesagnew 4b7a4ac794 Lots of bug fixes and documentation tweaks - Several failing unit tests checked in, need to get these passing 2014-05-07 08:18:43 -04:00
jamesagnew 9f302937d9 Committing all fixes and changes from Connectathon - Lots of minor fixes, and a DB module 2014-05-05 05:57:43 -07:00
jamesagnew 25a40df96e More work on the tester, and a number of bug fixes 2014-05-02 19:56:26 -07:00
jamesagnew a1aedf2f31 Documentation fixes 2014-05-01 17:53:33 -04:00
jamesagnew 862b1bd79d More work on tester 2014-05-01 08:40:48 -04:00
jamesagnew 63c9fb466c A number of bugfixes around parsing and client implementation 2014-04-30 18:39:33 -04:00
jamesagnew f737797d7a More tester work 2014-04-30 09:03:02 -04:00
jamesagnew 51c95219f6 Tester work 2014-04-30 07:47:05 -04:00
jamesagnew 7736e201e2 More qwork on the tester 2014-04-29 17:29:46 -04:00
jamesagnew c20e7e450a More work on the tester 2014-04-29 09:27:06 -04:00
jamesagnew 5615f9b7d7 Adding tester module - not nearly complete though 2014-04-28 18:04:26 -04:00
jamesagnew 2287011601 Refactor method outcomes abit 2014-04-28 08:39:22 -04:00
jamesagnew e69464f34d Lots of documentation (site and javadoc) updates, and make since and count params work for history operation 2014-04-27 22:17:27 -04:00
jamesagnew 6877c0628e Add validate method 2014-04-25 08:23:58 -04:00
jamesagnew 15ae763313 Response writing is fixed 2014-04-24 17:27:25 -04:00
jamesagnew 6d866b81b6 Get HttpServletRequest and Response working in server params 2014-04-24 12:25:47 -04:00
jamesagnew 23a8b12b5e Removing cruft files 2014-04-24 07:32:10 -04:00
jamesagnew b15462ddca Merge branch 'master' of ssh://git.code.sf.net/p/hl7api/fhircode 
Conflicts:
	hapi-fhir-base/pom.xml
	hapi-fhir-structures-dstu/pom.xml
	hapi-tinder-plugin/pom.xml
	hapi-tinder-test/pom.xml
	pom.xml
 2014-04-24 07:31:12 -04:00
jamesagnew ab3173f840 add assembly 2014-04-24 07:24:27 -04:00
jamesagnew 9ab7f8facc Fix unit tests and add changelog 2014-04-23 15:24:31 -04:00
jamesagnew 018e780343 Client security working 2014-04-23 14:23:32 -04:00
jamesagnew 0b93dcc491 Fix broken unit tests and begin preparing for non-resource specific items 2014-04-22 17:10:25 -04:00
jamesagnew 5da4698fab Some refactoring - Currently does not compile,will fix this afternoon 2014-04-22 08:58:28 -04:00
jamesagnew e9a71d843a Documentation enhancements 2014-04-17 18:13:23 -04:00
jamesagnew 1808896b28 Site fixes 2014-04-15 08:50:42 -04:00
jamesagnew 2c52f78eb5 Narrative changes 2014-04-14 16:26:00 -04:00
jamesagnew bdd5297603 Merge branch 'master' of ssh://git.code.sf.net/p/hl7api/fhircode 2014-04-14 13:01:54 -04:00
jamesagnew 03ee95c011 Add test 2014-04-14 13:01:42 -04:00
jamesagnew 2e5aac29d1 History operation working 2014-04-14 08:40:30 -04:00
jamesagnew 84096da74d Adding history 2014-04-10 15:57:45 -04:00
jamesagnew acb5b02672 Get delete working 2014-04-09 08:23:58 -04:00
jamesagnew 3a7ea0c8ba Merge branch 'master' of ssh://git.code.sf.net/p/hl7api/fhircode 2014-04-08 18:31:19 -04:00
jamesagnew 7d319fa770 Start to implement delete 2014-04-08 18:30:51 -04:00
t106uhn 28a4940601 added new jetty dependancy 2014-04-03 22:09:36 -04:00
jamesagnew ad05d8262e Remove Java 7 dependency 2014-04-03 17:26:52 -04:00
jamesagnew 69461ef10e Fixing unit tests 2014-04-03 14:30:49 -04:00
jamesagnew eda3995a72 More resources added 2014-04-03 07:45:07 -04:00
jamesagnew 7c64466a51 More resource generation 2014-04-02 18:42:16 -04:00
jamesagnew f7a4b48e07 Doc updates 2014-04-02 08:05:16 -04:00
jamesagnew 81b2b1cc50 More narrative work 2014-04-01 18:01:52 -04:00
jamesagnew 57a3a4881e Narrative fixes 2014-04-01 13:28:33 -04:00
jamesagnew 5a3de7c3dd Narrative generator docs 2014-04-01 08:12:45 -04:00
jamesagnew 12d8e8d19c Narrative docs 2014-03-31 17:10:05 -04:00
jamesagnew cfdf0bcf27 Website improvements 2014-03-31 08:19:31 -04:00
jamesagnew ea73770433 Documentation updates 2014-03-28 17:11:56 -04:00
jamesagnew b325a5bfb1 Create method almost working 2014-03-28 07:49:01 -04:00
jamesagnew b38be51668 Create methd 2014-03-27 18:38:24 -04:00
jamesagnew ad189d66e2 Starting workon post methods 2014-03-27 08:51:02 -04:00
jamesagnew 082ebb64c1 Narrative generator now working 2014-03-26 17:37:08 -04:00
jamesagnew 4953c5629c Narrative enhancements 2014-03-26 08:59:42 -04:00
jamesagnew ece3fab5f8 Merge branch 'master' of ssh://git.code.sf.net/p/hl7api/fhircode 2014-03-25 18:09:23 -04:00
jamesagnew de50244875 Narrative generation continuing 2014-03-25 18:08:57 -04:00
t37622uhn d3fc34a30a Removed CautionNote fields 2014-03-25 15:29:12 -04:00
jamesagnew 21619e5e46 Merge branch 'master' of ssh://git.code.sf.net/p/hl7api/fhircode 2014-03-25 13:43:35 -04:00
jamesagnew fb23e82ee9 Adding AdverseReaction 2014-03-25 13:42:38 -04:00
t37622uhn fbf7305a92 Renamed "setMyCautionNote" method to "setCautionNote" 2014-03-25 13:14:57 -04:00
t37622uhn fe387b564b Added Caution Note extension as a list of StringDt 2014-03-25 13:10:04 -04:00
jamesagnew fe26ff5515 Fix to generator 2014-03-25 09:04:54 -04:00
jamesagnew 1481eb8ae5 More work on narrative gen 2014-03-24 18:33:51 -04:00
jamesagnew b55a4e140e Lots of bugfixes, and narrative generator is started 2014-03-24 08:32:28 -04:00
jamesagnew 46d6387761 JsonParser contained working 2014-03-22 12:33:07 -04:00
jamesagnew cb19b17e59 Many bugfixes 2014-03-21 15:32:37 -04:00
jamesagnew 79bdd94f72 Some unit test fixes, still some failures 2014-03-21 08:12:44 -04:00
jamesagnew 2c425ca144 Fixing URL detection 2014-03-20 18:29:34 -04:00
jamesagnew 80826b62fd Fix unit tests 2014-03-20 13:49:51 -04:00
jamesagnew 1fddb04fb3 Start json parser 2014-03-20 08:02:36 -04:00
jamesagnew 31e8584f12 Unit test fixes 2014-03-19 17:38:31 -04:00
jamesagnew f278d9d096 Fix unit tests 2014-03-19 11:40:06 -04:00
jamesagnew eb1df7b36a Conformance generation 2014-03-19 08:56:37 -04:00
jamesagnew 7b7a663748 Get server conformance working 2014-03-18 17:31:32 -04:00
jamesagnew b8dd4fa9f2 Fix unit tests 2014-03-18 11:54:20 -04:00
jamesagnew 6b60703a74 Start include params 2014-03-18 08:41:48 -04:00
jamesagnew d6e3750657 Fix unit test bugs 2014-03-17 10:25:00 -04:00
jamesagnew 2ca5d57f0d Profile building complete 2014-03-17 08:57:57 -04:00
jamesagnew 5088850e6b More work on JSON parser, and contained resources 2014-03-16 15:09:30 -04:00
jamesagnew be7a31c4c5 More json parser work 2014-03-14 16:35:43 -04:00
jamesagnew f2ba56af2f Start JSON parser 2014-03-14 08:57:30 -04:00
jamesagnew f0214399ca Lots of fixes and docs to tinder 2014-03-13 17:33:12 -04:00
jamesagnew e0b5d224ca Fix unit tests 2014-03-13 12:43:25 -04:00
jamesagnew 561f765d00 Fixing extension building 2014-03-13 10:51:36 -04:00
jamesagnew 45c968532d Client generator now working 2014-03-13 08:00:01 -04:00
jamesagnew 360db1d296 More work on documentation 2014-03-12 18:21:17 -04:00
jamesagnew 8b6f00bb58 Workingon conformance operation for client 2014-03-12 09:03:17 -04:00
jamesagnew df2675867a More documentation 2014-03-11 17:39:41 -04:00
jamesagnew fefd0e9a57 More documentation and profile export working 2014-03-11 08:39:55 -04:00
jamesagnew 53882b2c23 Fix unit tests 2014-03-10 18:17:30 -04:00
jamesagnew 6140e73034 Merge branch 'master' of ssh://git.code.sf.net/p/hl7api/fhircode 2014-03-10 12:44:33 -04:00
jamesagnew c830d5f45d Getting profile generation working 2014-03-10 12:43:49 -04:00
Yogthos 1adfa2a246 updated AuthenticationException to extend BaseServerResponseException 2014-03-10 10:47:48 -04:00
Yogthos daa5ed6ea8 updated authenticate method in ISecurityManager to be void and throw an AuthenticationException, 
updated RestfulServer to return 401 when SecurityManager is present and authenticate throws the exception
 2014-03-10 10:43:33 -04:00
jamesagnew e63bb877ac Merge branch 'master' of ssh://git.code.sf.net/p/hl7api/fhircode 2014-03-07 17:31:38 -05:00
jamesagnew df46f25e7e Website changes 2014-03-07 17:31:05 -05:00
Yogthos 79670cf172 added the ISecurityManager interface 2014-03-07 17:18:40 -05:00
jamesagnew ff28a821d4 More client work 2014-03-07 16:23:49 -05:00
jamesagnew 9751aa15e8 More unit test work 2014-03-07 09:14:50 -05:00
jamesagnew b33d4028ab Client working 2014-03-06 17:12:05 -05:00
jamesagnew 82193017d8 More client work 2014-03-06 08:55:31 -05:00
jamesagnew b05ea01b45 Server is working a bit better still 2014-03-05 17:35:06 -05:00
jamesagnew d94d2719d9 Fix some merge issues 2014-03-05 09:33:29 -05:00
jamesagnew a74766e620 Merge branch 'master' of ssh://git.code.sf.net/p/hl7api/fhircode 
Conflicts:
	hapi-fhir-base/src/main/java/ca/uhn/fhir/server/RestfulServer.java
 2014-03-05 09:24:08 -05:00
jamesagnew b15504ab6a Starting client implementation 2014-03-05 08:26:26 -05:00
jamesagnew 3d281217da Services working now 2014-03-04 18:25:52 -05:00
jamesagnew 5828f49029 Server starting to work 2014-03-04 16:41:18 -05:00
jamesagnew ce17e82f9d Merge branch 'master' of ssh://git.code.sf.net/p/hl7api/fhircode 2014-03-04 09:17:04 -05:00
jamesagnew a2d2b81d7f Working on service implementation 2014-03-04 08:13:28 -05:00
jamesagnew 72ef42680a Maven plugin now working 2014-03-03 18:22:14 -05:00
jamesagnew 0320d40bc1 Building from profiles now almost works 2014-03-03 09:05:55 -05:00
jamesagnew 7926387786 ValueSet building 2014-02-28 16:30:34 -05:00
jamesagnew 1fab951815 Enumerated types 2014-02-28 13:27:35 -05:00
jamesagnew 42d8037a06 Atom parsing now works! 2014-02-27 16:51:43 -05:00
jamesagnew 14b795ad68 Merge branch 'master' of ssh://git.code.sf.net/p/hl7api/fhircode 
Conflicts:
	hapi-fhir-base/pom.xml
 2014-02-27 13:23:35 -05:00
jamesagnew ff40a4c1e3 Upgrading HTTP client version for unit tests 2014-02-27 13:21:47 -05:00
Yogthos 115fccc622 Merge remote-tracking branch 'origin/master' 2014-02-27 12:07:54 -05:00
Yogthos 3fdb05d208 updated dependencies 2014-02-27 12:07:27 -05:00
Yogthos f2d530112e cleaned up getting the return type for the resource method 2014-02-27 12:07:12 -05:00
jamesagnew 45c9186dee More Atom 2014-02-27 12:04:19 -05:00
jamesagnew bec9a51351 More Atom parsing work 2014-02-27 11:57:50 -05:00
jamesagnew b92cc66804 Merge branch 'master' of ssh://git.code.sf.net/p/hl7api/fhircode 2014-02-27 11:49:23 -05:00
Yogthos 7e979449b2 added initial web service implementation under ca.uhn.fhir.ws package 2014-02-27 11:48:46 -05:00
jamesagnew 193b181b63 About to try removing namespaces from parser 2014-02-27 10:20:25 -05:00
jamesagnew 00411b64f6 More work on Atom 2014-02-27 07:39:36 -05:00
jamesagnew 79a48611df Starting bundle processing 2014-02-26 17:13:49 -05:00
jamesagnew 352db3cc75 Sub resource blocks issue fixed 2014-02-26 09:03:43 -05:00
jamesagnew c8f02d5896 Merge branch 'master' of ssh://git.code.sf.net/p/hl7api/fhircode 
Conflicts:
	hapi-fhir-base/src/test/resources/example-uhn-profile.xml
 2014-02-25 21:11:13 -05:00
jamesagnew dd400c683b Starting Atom parse 2014-02-25 18:49:50 -05:00
jamesagnew e38740ac20 Adding simple setters for primitives 2014-02-25 08:43:55 -05:00
jamesagnew 2640ed9feb Starting works on profiles 2014-02-24 17:28:31 -05:00
jamesagnew e4d58077c8 FIx unit test - Need to deal with unexpected extensions still though.. 2014-02-24 13:55:44 -05:00
jamesagnew 1322dcfa7b Code generation coming along 2014-02-24 11:46:08 -05:00
jamesagnew 44f6e804b1 Extensions working now 2014-02-23 18:13:59 -05:00
jamesagnew 20a705929c Starting on extensions 2014-02-22 15:33:02 -05:00
jamesagnew 668da7b0eb More work 2014-02-21 21:06:11 -05:00
jamesagnew c878922362 More generator progress 2014-02-21 18:30:08 -05:00
jamesagnew 0fff9075f1 More template fixes 2014-02-21 12:38:30 -05:00
jamesagnew f6cd0a0199 Starting autogen code 2014-02-20 16:32:04 -05:00
jamesagnew 3717743cef Parsing observation now works! 2014-02-20 12:13:05 -05:00
jamesagnew d097553f11 XML parser finally almost working 2014-02-19 17:33:46 -05:00
jamesagnew 5296e8121c ..and still... 2014-02-19 13:02:51 -05:00
jamesagnew 9aa5e52911 Still not passing 2014-02-19 11:59:12 -05:00
jamesagnew 5e97109f4c Still not parsing 2014-02-18 18:10:50 -05:00
jamesagnew 87d4eb7c90 Still not working 2014-02-18 08:26:49 -05:00
jamesagnew 8d322c373c Just starting 2014-02-17 17:58:32 -05:00