Commit Graph

880 Commits

Author SHA1 Message Date
Diederik Muylwyk 225007d681 Completed work on FhirTerser.getValues(...) enhancements. 2018-10-19 18:24:26 -04:00
Diederik Muylwyk cd6d4302c3 Incremental work on FhirTerser.getValues(...) enhancements. 2018-10-19 15:13:51 -04:00
James Agnew 4e252063b8 Allow transactions and batches with transaction permission in
AuthorizationInterceptor
2018-10-16 19:54:55 -04:00
Patrick Werner 90a3ead24f
Merge pull request #1089 from srdo/issue-545
Issue-545: Base resource profile links should point to http://hl7.org
2018-10-09 12:05:47 +02:00
James Agnew c64567be68 More redundant test cleanup 2018-10-04 09:15:12 -04:00
James Agnew 597c8dbafe Remove redundant tests 2018-10-04 08:57:37 -04:00
James Agnew b265c0281b Expand search range when searching by date 2018-10-03 21:31:01 -04:00
Stig Rohde Døssing 2050355e1e Issue-545: Base resource profile links should point to http://hl7.org/fhir/StructureDefinition (invariant sdf-7 in spec) 2018-10-03 13:36:34 +02:00
James Agnew 3e445faf47 Squashed commit of the following:
commit df641506885e09e63f80efc6c658d01a1a3a8142
Author: James Agnew <jamesagnew@gmail.com>
Date:   Sat Sep 29 13:47:22 2018 -0400

    Shrink validation resources

commit 4c1550eafa26f4235b4b8804741aecc03276b5c6
Author: James Agnew <jamesagnew@gmail.com>
Date:   Fri Sep 28 22:45:28 2018 -0400

    Updates to get R4 working

commit 8332f15291006691ed9b07ead3e3524b0fc85510
Author: jamesagnew <jamesagnew@gmail.com>
Date:   Fri Sep 28 09:02:13 2018 -0400

    Ongoing work on gettign R4 working

commit f7146cab7aed937bb625a8aec95744d76db00041
Author: James Agnew <jamesagnew@gmail.com>
Date:   Fri Sep 28 05:21:01 2018 -0400

    More work on sync

commit f48de4a10b1bab2584fee813017d9b27b237bfa9
Merge: 9e4f3cc722 aacb78b779
Author: James Agnew <jamesagnew@gmail.com>
Date:   Thu Sep 27 20:11:29 2018 -0400

    Merge branch 'sync_r4' of github.com:jamesagnew/hapi-fhir into sync_r4

commit 9e4f3cc722668aae31a77b19bf9b032af3ae01b0
Author: James Agnew <jamesagnew@gmail.com>
Date:   Thu Sep 27 20:11:19 2018 -0400

    Fix compile error

commit 7ec29e0ceda8f9013cbabb95767cbe15b4b81303
Merge: 23f7517325 002c4b3ff7
Author: James Agnew <jamesagnew@gmail.com>
Date:   Thu Sep 27 20:04:23 2018 -0400

    Merge branch 'master' into sync_r4

commit aacb78b7793ab2c71e0a2a774240ee2b5d3f9e7f
Author: jamesagnew <jamesagnew@gmail.com>
Date:   Thu Sep 27 20:01:42 2018 -0400

    Keep working on getting R4 building

commit 4950de46d99897e74d41dfdb10d3d8a3435cb0c9
Author: jamesagnew <jamesagnew@gmail.com>
Date:   Tue Sep 25 13:11:27 2018 -0400

    Ongoing work to get R4 working

commit 819d69c20e112dd3c72569ec50114ddb8263c300
Author: jamesagnew <jamesagnew@gmail.com>
Date:   Thu Sep 20 08:15:36 2018 -0400

    Work on getting build working

commit 2c61b6cd1205ced5d7b822cf10942c69272ea078
Merge: 16b5bb06c8 dfb4de86f1
Author: jamesagnew <jamesagnew@gmail.com>
Date:   Thu Sep 20 05:16:53 2018 -0400

    Merge branch 'master' into sync_r4

commit 16b5bb06c8cdaf8d67c3b80f5aa9be9fccd99aef
Author: jamesagnew <jamesagnew@gmail.com>
Date:   Mon Sep 17 05:30:39 2018 -0400

    Work on R4 sync

commit 23f7517325a14dd2ca1eb5641296ead2776634ae
Author: James Agnew <jamesagnew@gmail.com>
Date:   Sun Sep 16 10:19:00 2018 -0400

    Work on sync

commit 6cc413c1f1dea538295aa4c16c21a5677494ac4c
Author: James Agnew <jamesagnew@gmail.com>
Date:   Fri Sep 14 17:28:28 2018 -0400

    Work on R$ sync

commit df6f6ad2ce783b07ccc383134705d874bc5d2cf1
Author: jamesagnew <jamesagnew@gmail.com>
Date:   Fri Sep 14 08:33:07 2018 -0400

    Work on R4
2018-09-29 13:48:35 -04:00
James Agnew 706e004b9d Bump to 3.6.0-SNAPSHOT 2018-09-19 10:24:48 -04:00
James Agnew daef975734 Version bump to 3.5.0 2018-09-08 07:22:21 +08:00
James Agnew f4a21eadda Fix this issue 2018-09-01 14:38:52 +08:00
James Agnew fee0166800 Work on removing validstion cache 2018-08-28 05:26:06 -04:00
James Agnew 54c07263b6 Increase code lengths 2018-08-26 12:32:35 -04:00
jamesagnew df651c830e Remove dynamic mode 2018-08-19 17:35:08 -04:00
jamesagnew 76c981664a Test fix 2018-08-12 19:03:24 -04:00
James Agnew ea1f17762e Don't apply last updated to includes 2018-08-11 12:20:07 -04:00
anamariaradu10 3a5556006b
Merge branch 'master' into master 2018-07-27 16:59:52 +03:00
Ana Maria Radu 9c39733aff Fixed issues 2018-07-27 16:48:44 +03:00
jamesagnew e5cb609f4d Performance improvements 2018-06-24 20:02:27 -04:00
James Agnew e9fffd3cdc Allow indexing in custom search params to descend into contained
resources
2018-06-22 11:22:07 -04:00
James Agnew ed0b5f54a5 More authorizationinterceptor tweaks for better security 2018-06-12 21:52:01 +08:00
James Agnew e7804b881c Fix CI issue 2018-06-06 11:39:06 -04:00
jamesagnew 3583dfd503 Correctly include project description in capabilitystatement 2018-06-03 16:19:33 -04:00
jamesagnew 987679483a Version bumps 2018-06-03 15:29:10 -04:00
jamesagnew 9db3be8536 Include implementation URL in generated capabilitystatement 2018-06-03 14:22:15 -04:00
James Agnew 35d5d3adb5 Disable useless test 2018-05-31 11:30:27 -04:00
James Agnew be1e0df9e2 Fix test flagged by errorprone 2018-05-30 10:48:53 -04:00
James Agnew d819d685ee Test fix 2018-05-30 09:57:41 -04:00
James Agnew a52805e504 Work on JDK9 support 2018-05-30 05:45:08 -04:00
Diederik Muylwyk 0e2c57fa60 Bumping version. 2018-05-28 17:44:38 -04:00
Diederik Muylwyk 2871920734 Preparing release. 2018-05-28 10:45:47 -04:00
jamesagnew 67f21426cb Disable content header on response for non-create operations 2018-05-25 07:28:01 -04:00
jamesagnew 98d997c620 Add changelog and credit for #867 2018-05-23 06:21:00 -04:00
James Agnew 6da4ec1156
Merge pull request #867 from jasonaowen/master
Fix methods that check for names in lists
2018-05-23 06:08:55 -04:00
jamesagnew 4d62120a18 Fix issues reported by errorprone 2018-05-15 08:44:15 -04:00
James Agnew a3ff08d9ec
Replace phloc with ph for #775 (#930)
* Replace phloc with ph

* Enable schematron tests

* Make HAPI-FHIR ph-schematron on OSGI

* Work on getting tests passing

* Another test fix

* Fix up transaction handling for DSTU2

* Add changelog

* Avoid double transaction

* Dont use readonly

* One more test fix

* Update to snapshow build

* Resolve a circular dependency

* Try to fix tests

* Solve recurring NPE in DSTU2 tests

* Fix one more test

* Test fix

* More test threading fixes

* One more attempt to get tests passing

* Refactoring for tests

* Refactoring for tests
2018-05-14 17:38:40 -04:00
jamesagnew 3d762b984b Sync to R4 definitions 2018-05-12 19:35:42 -04:00
James Agnew 593a705365 Performance enhancements on the CapabilityStatement generator for JPA
server
2018-04-28 11:06:42 -04:00
James Agnew 07e7af746f Work on expunge operation 2018-04-22 22:03:23 -04:00
jamesagnew 180336e076 Sync to master 2018-03-29 06:54:24 -04:00
jamesagnew 53c2d8a38d Merge branch 'master' into loinc_loader_update 2018-03-29 06:21:55 -04:00
jamesagnew 418e82032f Prep for 3.3.0 2018-03-29 05:48:13 -04:00
James Agnew b56d65ef5b
Merge pull request #871 from johnpoth/hapi-fhir-osgi
Implement #826 - add OSGI support and Apache Karaf features with inte…
2018-03-27 06:06:34 -04:00
James Agnew 29c09e40f0
Merge pull request #858 from patrick-werner/master
added Test for #11 to Dstu3 and R4, fixed #853
2018-03-24 06:31:24 -04:00
James Agnew 308ac63a77 Merge branch 'master' into loinc_loader_update 2018-03-20 07:53:41 -04:00
James Agnew 6359f7f8a1 More work on loinc 2018-03-19 08:51:02 -04:00
patrick-werner ff04ab3358 ${argLine} -> [at]{argLine}
see:
http://maven.apache.org/surefire/maven-surefire-plugin/faq.html#late-property-evaluation
2018-03-19 10:45:33 +01:00
jamesagnew dd7deae1c1 Merge branch 'master' of github.com:jamesagnew/hapi-fhir 2018-03-12 06:43:42 -04:00
jamesagnew 49192e5e48 Credit for #776 2018-03-12 06:42:22 -04:00
James Agnew 60354a4cc8
Merge branch 'master' into master 2018-03-12 07:41:22 -03:00
James Agnew cb2f5a0bba
Merge pull request #786 from CarthageKing/bugfix-chaining-urlvalue
ensure to use resourceType properly when it is explicitly provided in a chained reference param
2018-03-12 07:32:27 -03:00
patrick-werner 0cee57392a Merge remote-tracking branch 'upstream/master'
# Conflicts:
#	hapi-fhir-validation/src/test/java/org/hl7/fhir/r4/validation/FhirInstanceValidatorR4Test.java
2018-03-07 11:45:31 -03:00
jamesagnew 8bdca012d6 Merge branch 'master' of github.com:jamesagnew/hapi-fhir 2018-03-04 11:04:07 -05:00
jamesagnew 07290ae8a0 Sync to latest R4 code 2018-03-04 11:02:47 -05:00
jamesagnew b2ceb87a70 Work on #873 2018-03-03 17:50:29 -05:00
Gaetano Gallo 3009ec7f74 - added guava-testlib as test dependency to modules hapi-fhir-structures-dstu2 and hapi-fhir-structures-dstu3
- added DateRangeParam.equals(Object) and DateRangeParam.hashCode()
- fixed broken DateParamTest
2018-03-02 13:03:30 +01:00
jpoth 66ebfa0ed3 Implement #826 - add OSGI support and Apache Karaf features with integration tests 2018-02-28 11:32:53 +01:00
Jason Owen 2f139640e5 Add unit tests for HumanName has(String) methods
Prefixes, given names, and suffixes can all have multiple entries, and
so are kept in a list. The `hasPrefix(String)` and its sibling methods
are conveniences for checking that these lists contain the given
element. Add tests around those three methods to ensure that the list
checking code is correct.

Issue #865 HumanName#hasGiven(String) can never return true
2018-02-26 18:22:38 -05:00
patrick-werner a8f3c2efb6 added Test for #11 to Dstu3 and R4 2018-02-21 16:03:31 +01:00
James Agnew 0e2d55081f Fix a crash when no count parameter supplied 2018-02-02 12:31:59 -05:00
James Agnew b61887e841 Improve performance of base64 validation 2018-01-30 17:37:12 -06:00
James Agnew 8d468de551 Use R4 validator for DSTU3 validation 2018-01-30 11:16:04 -06:00
James Agnew f976b7bf7e Add new interceptor method which enabled interceptors to modify response 2018-01-28 14:01:20 -06:00
Simon Janic 97a1ccac3d Merge remote-tracking branch 'upstream/master' 2018-01-28 16:43:32 +01:00
James Agnew 16038ece26 Version bump to 3.3.0-SNAPSHOT 2018-01-23 10:31:01 -05:00
James Agnew 6468ca474a Verion bump to 3.2.0 2018-01-13 02:14:33 -05:00
James Agnew 01186ec8cb Squashed commit of the following:
commit ab876ef864005b6758d3e00a1bb1ef2dad5d2161
Author: James Agnew <jamesagnew@gmail.com>
Date:   Fri Jan 12 18:59:15 2018 -0500

    Tests all passing

commit 4f8a5d98307da1bb5ca7602e34b1d3b791f73d25
Author: jamesagnew <jamesagnew@gmail.com>
Date:   Fri Jan 12 08:21:58 2018 -0500

    Almost compiling
2018-01-12 18:59:43 -05:00
James Agnew 4e2db2b58b More work on multitenancy 2018-01-11 11:23:14 -05:00
James Agnew 377bae8c16 Allow interceptors to modify request contents 2018-01-06 14:27:32 -05:00
James Agnew a8e5413d1f Fix two issues found by ErrorProne 2017-12-22 13:47:40 -05:00
James Agnew 8c10d96416 Add tests 2017-12-22 13:33:35 -05:00
James Agnew 19863de012 Update javadocs on IdType 2017-12-19 15:57:22 -05:00
James Agnew 6c85cd1375 Improve documentation and mark redundant methods as deprecated in
IServerInterceptor
2017-12-12 21:45:54 -05:00
James Agnew d00c7dbea8 Giant breakthrough in fixing sporadic test failures! 2017-12-05 12:08:56 -05:00
Simon Janic 8427fc4547 Merge remote-tracking branch 'upstream/master' 2017-11-26 14:23:33 +01:00
James Agnew 3e296f9d1b Merge branch 'master' of github.com:jamesagnew/hapi-fhir 2017-11-25 17:53:01 -05:00
James Agnew 6afe6804db Fix #796 - Correctly escape spaces in generated URLs 2017-11-25 17:52:12 -05:00
jamesagnew 5b909b4746 Version bump to 3.2.0-SNAPSHOT 2017-11-24 13:32:47 -05:00
jamesagnew 42dd34252d Version bump to 3.1.0 2017-11-23 13:27:21 -05:00
Simon Marco Janic 46fcceb9c6 [(master)] Merge remote-tracking branch 'upstream/master' 2017-11-21 11:15:50 +01:00
James Agnew 60b6c3745b Add test for #794 2017-11-20 12:03:45 -05:00
michael.i.calderero 874390df61 treat reference param values as opaque and not an url when the param is
chained
2017-11-15 15:03:53 -06:00
michael.i.calderero b277693106 ensure to use resourceType properly when it is explicitly provided in a
chained reference parameter
2017-11-14 19:00:28 -06:00
James Agnew 99320c3b96 More memory for compiler 2017-11-13 16:17:20 -05:00
James Agnew 59f4177a59 Fix #750 - Elements are not preserved in page requests 2017-11-06 19:49:50 -05:00
Simon Marco Janic 78744ac9e4 [(master)] Merge remote-tracking branch 'origin/master'
# Conflicts:
#	hapi-fhir-structures-dstu3/src/main/java/org/hl7/fhir/dstu3/model/codesystems/DeviceStatusEnumFactory.java
2017-11-06 12:59:44 +01:00
Simon Marco Janic edb1479af9 [(master)] Renamed files in wrong casing. 2017-11-06 12:57:25 +01:00
Simon Marco Janic 6040eef7ee [(master)] Renamed files in wrong casing. 2017-11-06 11:55:49 +01:00
Simon Marco Janic 09a419e354 [(master)] Renamed files in wrong casing. 2017-11-06 11:55:08 +01:00
Simon Marco Janic 5e9f88df2d [(master)] Renamed files in wrong casing. 2017-11-06 11:54:14 +01:00
James Agnew 2b4a492870 Merge branch 'master' of github.com:jamesagnew/hapi-fhir 2017-11-05 19:22:13 -05:00
James Agnew 932bb2ed8e Fix test 2017-11-05 19:21:23 -05:00
James bde05c8b4d Fix broken DeviceStatus enums 2017-11-05 19:20:49 -05:00
James Agnew 37c8e6c645 Add test for #751 2017-11-05 18:52:28 -05:00
James Agnew 75bfb6af1b Add support for Binary X-Security-Context header in server 2017-11-02 11:38:43 -04:00
James Agnew 256d541dda
Merge pull request #736 from malcolmm83/master
Fix for Binary.securityContext is not being encoded #734
2017-11-01 15:37:43 -04:00
Simon Marco Janic 11dc917540 [(master)] Reverted unintentional changes 2017-11-01 12:52:17 +01:00
Simon Marco Janic 53674db357 [(master)] Added support for extensions in Meta resource 2017-11-01 11:37:51 +01:00
James Agnew c5b7fea01d
Merge pull request #725 from InfiniteLoop90/issue-724-copy-domain-resource-id
Fixes #724 - Resource IDs are now copied when copying instances of subclasses of DomainResource for DSTU2 and DSTU2.1.
2017-10-31 17:41:33 -04:00
James Agnew 0fec0485e8 Merge pull request #717 from aehrc/feature/ifModifiedSince_bugfix_master
fix bugs with inverted test for If-Modified-Since (impl and tests)
2017-10-26 18:31:19 -04:00
James Agnew 0875318842 Merge pull request #711 from InfiniteLoop90/master
Added R4 to the client's server version check. Also tweaked the ClientServerValidation* tests to be a little more predictable
2017-10-26 17:56:48 -04:00
James 15ba0dff03 Clean up email subscription type 2017-10-26 06:02:12 -04:00
James Agnew 10d6f7db1b Merge branch 'master' of github.com:jamesagnew/hapi-fhir 2017-10-21 13:48:04 -04:00
James Agnew 16e19a9fed Fix #720 - Failure to parse custom type 2017-10-21 13:47:03 -04:00
James b79dd75fce Update to Spring 5 2017-10-19 07:40:43 -04:00
James 73382d85ca Fix #761 - Restore codesystem package from DSTU3 and add unit tests to
verify existence
2017-10-17 15:18:36 -04:00
James a782bd7630 Fix a number of problems reported by ErrorProne 2017-10-16 10:00:27 -04:00
James Agnew 9ca85b4cf3 Re-enable errorprone on standard hapi fhir build. woohoo! 2017-10-15 11:27:30 -04:00
James Agnew 0a2525e1e0 Remove some duplicate classes 2017-10-14 15:42:55 -04:00
James 31fb1236a1 Reuse bundle ID when returning query cache results 2017-10-11 06:05:14 -04:00
James Agnew 87383ad802 Version bump to 3.1.0-SNAPSHOT 2017-09-27 21:23:34 -04:00
Malcolm McRoberts 511f4939c8 Merge branch 'master' of https://github.com/jamesagnew/hapi-fhir
Changes to encoding for Binary and unit test.
2017-09-25 00:02:10 -04:00
Malcolm McRoberts a57003808d Added unit test for encoding Binary with securityContext, and fixed encoding in JasonParser 2017-09-24 23:55:27 -04:00
James e19c13fa6f Prepare 3.0.0 release 2017-09-24 17:55:16 -04:00
James 49bdaa1a45 Version bump to 3.0.0 2017-09-23 17:31:39 -04:00
James 5f89f6ed16 Improve test logging 2017-09-21 06:13:30 -04:00
James Agnew fc7144ee03 Work on JPA optimization 2017-09-17 20:05:28 -04:00
James Agnew 2bb01451ea Cleanup of validator 2017-09-09 20:55:00 -07:00
James Agnew 836d4d051b Work on IG Pack uploading 2017-09-07 20:33:19 -07:00
Clayton Bodendein 8f06cf7322 Related to issue #724 - Added more unit tests 2017-09-05 14:45:32 -05:00
Clayton Bodendein 5650238421 Related to issue #724 - Also ensures that the ID is copied for HL7 DSTU2 and DSTU2.1 subclasses of BackboneElement when the #copy() method is called. Also added unit tests for these and reverted the line endings of the HL7 DSTU2 and DSTU2.1 versions of the DomainResource class back to CRLF 2017-09-04 22:58:15 -05:00
Clayton Bodendein 8fb528c1c9 Related to issue #724 - forgot a right curly brace in Javadoc comment 2017-09-04 10:48:37 -05:00
Clayton Bodendein 7b46bca1bf Also fixes #724 - Added unit tests to ensure that the IDs of instances of DomainResource subclasses get copied as expected 2017-09-04 10:46:09 -05:00
Michael Lawley a4365f9b83 fix bugs with inverted test for If-Modified-Since (impl and tests) 2017-08-24 13:54:59 +10:00
James b9494c179a Squashed commit of the following:
commit fa508e27b2
Author: James Agnew <jamesagnew@gmail.com>
Date:   Mon Aug 14 20:38:12 2017 -0400

    Fix android tests

commit dea567e960
Author: James Agnew <jamesagnew@gmail.com>
Date:   Mon Aug 14 20:25:28 2017 -0400

    Still trying to get tests passing

commit 6bbfec381f
Author: James Agnew <jamesagnew@gmail.com>
Date:   Mon Aug 14 20:00:59 2017 -0400

    Work on getting tests passing

commit 5e0a7672b7
Author: James Agnew <jamesagnew@gmail.com>
Date:   Mon Aug 14 18:12:58 2017 -0400

    Work on GraphQL integration

commit 1c88fd154d
Author: James Agnew <jamesagnew@gmail.com>
Date:   Mon Aug 14 15:19:41 2017 -0400

    Upgrade subscriptions to use interceptors across the board

commit de5c01c00d
Author: James <jamesagnew@gmail.com>
Date:   Mon Aug 14 09:09:32 2017 -0400

    Work on subscription

commit 387d504098
Author: James Agnew <jamesagnew@gmail.com>
Date:   Mon Aug 14 06:19:25 2017 -0400

    Work on subscriptions

commit 95a607d155
Merge: d851de7ffd b9dbd64101
Author: James Agnew <jamesagnew@gmail.com>
Date:   Sun Aug 13 22:42:22 2017 -0400

    Merge branch 'hapi3_refactor' of github.com:jamesagnew/hapi-fhir into hapi3_refactor

commit d851de7ffd
Merge: 5413b276af 209752cd63
Author: James Agnew <jamesagnew@gmail.com>
Date:   Sun Aug 13 22:42:00 2017 -0400

    Merge branch 'hapi3_refactor' of github.com:jamesagnew/hapi-fhir into hapi3_refactor

commit b9dbd64101
Author: James <jamesagnew@gmail.com>
Date:   Sun Aug 13 22:40:35 2017 -0400

    Work on subscriptions

commit 12f89a423a
Author: James <jamesagnew@gmail.com>
Date:   Sun Aug 13 14:38:51 2017 -0400

    Minimize validation resources

commit f6868cce5c
Merge: 3b80779fd3 1e158311d8
Author: James <jamesagnew@gmail.com>
Date:   Sun Aug 13 14:05:34 2017 -0400

    Forward port fix for #710

    Merge branch 'master' into hapi3_refactor

commit 3b80779fd3
Merge: 1f534985e8 356d9acaf7
Author: James <jamesagnew@gmail.com>
Date:   Sun Aug 13 12:31:09 2017 -0400

    Forward port #705, #708, and #710

    Merge branch 'master' into hapi3_refactor

commit 1f534985e8
Merge: 7c39a47852 dedd3d635b
Author: James <jamesagnew@gmail.com>
Date:   Sun Aug 13 10:52:59 2017 -0400

    Forward port #695

    Merge branch 'master' into hapi3_refactor

commit 7c39a47852
Merge: e0ffb84d21 6efafe62f1
Author: James <jamesagnew@gmail.com>
Date:   Sun Aug 13 09:53:17 2017 -0400

    Forward port #688

    Merge branch 'master' into hapi3_refactor

commit e0ffb84d21
Merge: 52388c11c1 d19b00ff09
Author: James <jamesagnew@gmail.com>
Date:   Sat Aug 12 14:59:46 2017 -0400

    Merge branch 'master' into hapi3_refactor

commit 52388c11c1
Author: James <jamesagnew@gmail.com>
Date:   Sat Aug 12 06:21:46 2017 -0400

    Cleanup

commit 5413b276af
Author: James Agnew <jamesagnew@gmail.com>
Date:   Thu Aug 10 11:36:25 2017 -0400

    Work on graph QL support

commit 209752cd63
Author: James <jamesagnew@gmail.com>
Date:   Thu Aug 10 11:18:19 2017 -0400

    Fix tests

commit 4543408dc8
Author: James <jamesagnew@gmail.com>
Date:   Sat Aug 5 06:55:50 2017 -0400

    Fix a potential deadlock

commit ee360f5376
Author: James <jamesagnew@gmail.com>
Date:   Sat Aug 5 06:22:06 2017 -0400

    Add R4 code to CLI

commit 1a95ba3b65
Author: James Agnew <jamesagnew@gmail.com>
Date:   Thu Aug 3 06:14:01 2017 -0400

    More cleanup

commit f0d8802681
Author: James <jamesagnew@gmail.com>
Date:   Wed Aug 2 11:27:43 2017 -0400

    Tests are working!

commit a4cbda357e
Author: James Agnew <jamesagnew@gmail.com>
Date:   Wed Aug 2 10:42:04 2017 -0400

    Connection handling cleanup for new tests

commit 0e2cecfbd0
Author: James Agnew <jamesagnew@gmail.com>
Date:   Wed Aug 2 10:16:28 2017 -0400

    Clean up R4 JPA tests

commit 40317a650d
Author: James <jamesagnew@gmail.com>
Date:   Wed Aug 2 09:12:38 2017 -0400

    Work on R4 for JPA server

commit e7f8f8c30d
Author: James <jamesagnew@gmail.com>
Date:   Tue Aug 1 20:43:47 2017 -0400

    More work on porting tests

commit 43c9003258
Author: James <jamesagnew@gmail.com>
Date:   Tue Aug 1 07:09:29 2017 -0400

    Work on porting DSTU1 tests

commit 602857f1e2
Author: James Agnew <jamesagnew@gmail.com>
Date:   Mon Jul 31 22:34:08 2017 -0400

    More work on bring unit tests up to date

commit e326a7b0cd
Author: James Agnew <jamesagnew@gmail.com>
Date:   Mon Jul 31 17:36:38 2017 -0400

    Credit for #686 and forward port the fix to R4 validator

commit 96543c3992
Merge: 3fb75aa61a 9901b802c4
Author: James Agnew <jamesagnew@gmail.com>
Date:   Mon Jul 31 17:12:33 2017 -0400

    Merge branch 'master' into hapi3_refactor

commit 3fb75aa61a
Author: James <jamesagnew@gmail.com>
Date:   Mon Jul 31 15:21:30 2017 -0400

    More work on cleanup

commit b02fbb6804
Author: James Agnew <jamesagnew@gmail.com>
Date:   Sun Jul 30 22:11:07 2017 -0400

    Work on porting STU1 tests

commit 1ae37b0db3
Author: James Agnew <jamesagnew@gmail.com>
Date:   Sun Jul 30 20:56:10 2017 -0400

    Try to get coverage report working

commit 72b88849b3
Author: James Agnew <jamesagnew@gmail.com>
Date:   Sun Jul 30 20:27:02 2017 -0400

    Fix android tests

commit e5f6c35aea
Author: James <jamesagnew@gmail.com>
Date:   Sun Jul 30 19:31:18 2017 -0400

    More work on getting legacy code cleaned up

commit 0b513b0845
Author: James <jamesagnew@gmail.com>
Date:   Sun Jul 30 18:41:13 2017 -0400

    Continue work on removing deprecated API

commit defea69aa3
Author: James Agnew <jamesagnew@gmail.com>
Date:   Sun Jul 30 17:10:01 2017 -0400

    More cleanup of legacy code

commit 9ae7295705
Author: James <jamesagnew@gmail.com>
Date:   Sun Jul 30 07:11:45 2017 -0400

    More cleanup of legacy code

commit ebd3eeb5ee
Author: James Agnew <jamesagnew@gmail.com>
Date:   Sun Jul 30 06:43:25 2017 -0400

    More work on removing legacy code

commit 92224c2532
Author: James <jamesagnew@gmail.com>
Date:   Sat Jul 29 18:44:06 2017 -0400

    Remove DSTU1 Bundle

commit c52cacf71b
Author: James <jamesagnew@gmail.com>
Date:   Sat Jul 29 14:27:42 2017 -0400

    Now compiling

commit b405e51773
Merge: c3ddf04e25 cb2cea54d7
Author: James Agnew <jamesagnew@gmail.com>
Date:   Fri Jul 28 06:21:02 2017 -0400

    Merge branch 'master' into hapi3_refactor

commit c3ddf04e25
Author: James <jamesagnew@gmail.com>
Date:   Thu Jul 27 11:06:06 2017 -0400

    Sync R4 releases in

commit b13333c3c0
Author: James <jamesagnew@gmail.com>
Date:   Fri Jul 14 05:52:33 2017 -0400

    JPA server is now able to handle placeholder IDs (e.g. urn:uuid:00....000) being used in Bundle.entry.request.url as a part of the conditional URL within transactions.

commit 2e60ff7521
Author: James Agnew <jamesagnew@gmail.com>
Date:   Thu Jul 13 20:02:46 2017 -0400

    Fix imports

commit a92ace2e0d
Merge: 3196db96d1 1a6b3ea867
Author: James Agnew <jamesagnew@gmail.com>
Date:   Thu Jul 13 12:02:27 2017 -0400

    Merge branch 'master' into hapi3_refactor

commit 3196db96d1
Author: James Agnew <jamesagnew@gmail.com>
Date:   Thu Jul 13 11:48:10 2017 -0400

    Don't add false paging link to request

commit bd4e1d3388
Author: James <jamesagnew@gmail.com>
Date:   Sun Jul 9 21:32:16 2017 -0400

    Finally building correctly!

commit 6464ce9304
Author: James <jamesagnew@gmail.com>
Date:   Sun Jul 9 16:38:28 2017 -0400

    Work on refactor

commit 0059f2e48e
Author: James <jamesagnew@gmail.com>
Date:   Sat Jul 8 07:16:20 2017 -0400

    Keep working on refactor

commit 6c2e87e8cc
Author: James Agnew <jamesagnew@gmail.com>
Date:   Thu Jul 6 22:35:13 2017 -0400

    Lots of work on refactor

commit 11cab97504
Merge: 34ec6b8807 6c47bd4c51
Author: James Agnew <jamesagnew@gmail.com>
Date:   Thu Jul 6 21:43:57 2017 -0400

    Merge branch 'master' into hapi3_refactor

commit 34ec6b8807
Merge: f8e647511b c520e60ac1
Author: James Agnew <jamesagnew@gmail.com>
Date:   Thu Jul 6 21:43:49 2017 -0400

    Merge branch 'hapi3_refactor' of github.com:jamesagnew/hapi-fhir into hapi3_refactor

commit f8e647511b
Author: James Agnew <jamesagnew@gmail.com>
Date:   Thu Jul 6 18:46:55 2017 -0400

    Work on hapi3 changes

commit c520e60ac1
Author: James <jamesagnew@gmail.com>
Date:   Wed Jul 5 08:08:40 2017 -0400

    Keep working on refactor

commit f1d2ee9092
Author: James Agnew <jamesagnew@gmail.com>
Date:   Mon Jul 3 22:10:59 2017 -0400

    Continue refactor for HAPI 3

commit 9281ccafc3
Merge: ea1264cd8e 294d080bd3
Author: James Agnew <jamesagnew@gmail.com>
Date:   Mon Jul 3 20:34:16 2017 -0400

    Merge branch 'master' into hapi3_refactor

commit ea1264cd8e
Author: James <jamesagnew@gmail.com>
Date:   Wed Jun 28 10:26:01 2017 -0400

    Continue work on refactor

commit fbe2f98a02
Merge: b2bef47100 0a4dcc32ec
Author: James <jamesagnew@gmail.com>
Date:   Wed Jun 28 06:21:22 2017 -0400

    Merge branch 'master' into hapi3_refactor

commit b2bef47100
Author: James <jamesagnew@gmail.com>
Date:   Tue Jun 27 21:13:23 2017 -0400

    Work on refactor

commit 8f76e4e463
Author: James Agnew <jamesagnew@gmail.com>
Date:   Sun Jun 25 21:55:35 2017 -0400

    Lots of work on refactoring
2017-08-14 21:35:56 -04:00
Clayton Bodendein 9a6f4f89a3 Added R4 to the client's server version check. Also tweaked the ClientServerValidation* tests to be a little more predictable 2017-08-13 17:33:47 -05:00
James be5c5ebecd Merge in HAPI 3.0.0 working branch!
Squashed commit of the following:

commit 12f89a423a
Author: James <jamesagnew@gmail.com>
Date:   Sun Aug 13 14:38:51 2017 -0400

    Minimize validation resources

commit f6868cce5c
Merge: 3b80779fd3 1e158311d8
Author: James <jamesagnew@gmail.com>
Date:   Sun Aug 13 14:05:34 2017 -0400

    Forward port fix for #710

    Merge branch 'master' into hapi3_refactor

commit 3b80779fd3
Merge: 1f534985e8 356d9acaf7
Author: James <jamesagnew@gmail.com>
Date:   Sun Aug 13 12:31:09 2017 -0400

    Forward port #705, #708, and #710

    Merge branch 'master' into hapi3_refactor

commit 1f534985e8
Merge: 7c39a47852 dedd3d635b
Author: James <jamesagnew@gmail.com>
Date:   Sun Aug 13 10:52:59 2017 -0400

    Forward port #695

    Merge branch 'master' into hapi3_refactor

commit 7c39a47852
Merge: e0ffb84d21 6efafe62f1
Author: James <jamesagnew@gmail.com>
Date:   Sun Aug 13 09:53:17 2017 -0400

    Forward port #688

    Merge branch 'master' into hapi3_refactor

commit e0ffb84d21
Merge: 52388c11c1 d19b00ff09
Author: James <jamesagnew@gmail.com>
Date:   Sat Aug 12 14:59:46 2017 -0400

    Merge branch 'master' into hapi3_refactor

commit 52388c11c1
Author: James <jamesagnew@gmail.com>
Date:   Sat Aug 12 06:21:46 2017 -0400

    Cleanup

commit 209752cd63
Author: James <jamesagnew@gmail.com>
Date:   Thu Aug 10 11:18:19 2017 -0400

    Fix tests

commit 4543408dc8
Author: James <jamesagnew@gmail.com>
Date:   Sat Aug 5 06:55:50 2017 -0400

    Fix a potential deadlock

commit ee360f5376
Author: James <jamesagnew@gmail.com>
Date:   Sat Aug 5 06:22:06 2017 -0400

    Add R4 code to CLI

commit 1a95ba3b65
Author: James Agnew <jamesagnew@gmail.com>
Date:   Thu Aug 3 06:14:01 2017 -0400

    More cleanup

commit f0d8802681
Author: James <jamesagnew@gmail.com>
Date:   Wed Aug 2 11:27:43 2017 -0400

    Tests are working!

commit a4cbda357e
Author: James Agnew <jamesagnew@gmail.com>
Date:   Wed Aug 2 10:42:04 2017 -0400

    Connection handling cleanup for new tests

commit 0e2cecfbd0
Author: James Agnew <jamesagnew@gmail.com>
Date:   Wed Aug 2 10:16:28 2017 -0400

    Clean up R4 JPA tests

commit 40317a650d
Author: James <jamesagnew@gmail.com>
Date:   Wed Aug 2 09:12:38 2017 -0400

    Work on R4 for JPA server

commit e7f8f8c30d
Author: James <jamesagnew@gmail.com>
Date:   Tue Aug 1 20:43:47 2017 -0400

    More work on porting tests

commit 43c9003258
Author: James <jamesagnew@gmail.com>
Date:   Tue Aug 1 07:09:29 2017 -0400

    Work on porting DSTU1 tests

commit 602857f1e2
Author: James Agnew <jamesagnew@gmail.com>
Date:   Mon Jul 31 22:34:08 2017 -0400

    More work on bring unit tests up to date

commit e326a7b0cd
Author: James Agnew <jamesagnew@gmail.com>
Date:   Mon Jul 31 17:36:38 2017 -0400

    Credit for #686 and forward port the fix to R4 validator

commit 96543c3992
Merge: 3fb75aa61a 9901b802c4
Author: James Agnew <jamesagnew@gmail.com>
Date:   Mon Jul 31 17:12:33 2017 -0400

    Merge branch 'master' into hapi3_refactor

commit 3fb75aa61a
Author: James <jamesagnew@gmail.com>
Date:   Mon Jul 31 15:21:30 2017 -0400

    More work on cleanup

commit b02fbb6804
Author: James Agnew <jamesagnew@gmail.com>
Date:   Sun Jul 30 22:11:07 2017 -0400

    Work on porting STU1 tests

commit 1ae37b0db3
Author: James Agnew <jamesagnew@gmail.com>
Date:   Sun Jul 30 20:56:10 2017 -0400

    Try to get coverage report working

commit 72b88849b3
Author: James Agnew <jamesagnew@gmail.com>
Date:   Sun Jul 30 20:27:02 2017 -0400

    Fix android tests

commit e5f6c35aea
Author: James <jamesagnew@gmail.com>
Date:   Sun Jul 30 19:31:18 2017 -0400

    More work on getting legacy code cleaned up

commit 0b513b0845
Author: James <jamesagnew@gmail.com>
Date:   Sun Jul 30 18:41:13 2017 -0400

    Continue work on removing deprecated API

commit defea69aa3
Author: James Agnew <jamesagnew@gmail.com>
Date:   Sun Jul 30 17:10:01 2017 -0400

    More cleanup of legacy code

commit 9ae7295705
Author: James <jamesagnew@gmail.com>
Date:   Sun Jul 30 07:11:45 2017 -0400

    More cleanup of legacy code

commit ebd3eeb5ee
Author: James Agnew <jamesagnew@gmail.com>
Date:   Sun Jul 30 06:43:25 2017 -0400

    More work on removing legacy code

commit 92224c2532
Author: James <jamesagnew@gmail.com>
Date:   Sat Jul 29 18:44:06 2017 -0400

    Remove DSTU1 Bundle

commit c52cacf71b
Author: James <jamesagnew@gmail.com>
Date:   Sat Jul 29 14:27:42 2017 -0400

    Now compiling

commit b405e51773
Merge: c3ddf04e25 cb2cea54d7
Author: James Agnew <jamesagnew@gmail.com>
Date:   Fri Jul 28 06:21:02 2017 -0400

    Merge branch 'master' into hapi3_refactor

commit c3ddf04e25
Author: James <jamesagnew@gmail.com>
Date:   Thu Jul 27 11:06:06 2017 -0400

    Sync R4 releases in

commit b13333c3c0
Author: James <jamesagnew@gmail.com>
Date:   Fri Jul 14 05:52:33 2017 -0400

    JPA server is now able to handle placeholder IDs (e.g. urn:uuid:00....000) being used in Bundle.entry.request.url as a part of the conditional URL within transactions.

commit 2e60ff7521
Author: James Agnew <jamesagnew@gmail.com>
Date:   Thu Jul 13 20:02:46 2017 -0400

    Fix imports

commit a92ace2e0d
Merge: 3196db96d1 1a6b3ea867
Author: James Agnew <jamesagnew@gmail.com>
Date:   Thu Jul 13 12:02:27 2017 -0400

    Merge branch 'master' into hapi3_refactor

commit 3196db96d1
Author: James Agnew <jamesagnew@gmail.com>
Date:   Thu Jul 13 11:48:10 2017 -0400

    Don't add false paging link to request

commit bd4e1d3388
Author: James <jamesagnew@gmail.com>
Date:   Sun Jul 9 21:32:16 2017 -0400

    Finally building correctly!

commit 6464ce9304
Author: James <jamesagnew@gmail.com>
Date:   Sun Jul 9 16:38:28 2017 -0400

    Work on refactor

commit 0059f2e48e
Author: James <jamesagnew@gmail.com>
Date:   Sat Jul 8 07:16:20 2017 -0400

    Keep working on refactor

commit 6c2e87e8cc
Author: James Agnew <jamesagnew@gmail.com>
Date:   Thu Jul 6 22:35:13 2017 -0400

    Lots of work on refactor

commit 11cab97504
Merge: 34ec6b8807 6c47bd4c51
Author: James Agnew <jamesagnew@gmail.com>
Date:   Thu Jul 6 21:43:57 2017 -0400

    Merge branch 'master' into hapi3_refactor

commit 34ec6b8807
Merge: f8e647511b c520e60ac1
Author: James Agnew <jamesagnew@gmail.com>
Date:   Thu Jul 6 21:43:49 2017 -0400

    Merge branch 'hapi3_refactor' of github.com:jamesagnew/hapi-fhir into hapi3_refactor

commit f8e647511b
Author: James Agnew <jamesagnew@gmail.com>
Date:   Thu Jul 6 18:46:55 2017 -0400

    Work on hapi3 changes

commit c520e60ac1
Author: James <jamesagnew@gmail.com>
Date:   Wed Jul 5 08:08:40 2017 -0400

    Keep working on refactor

commit f1d2ee9092
Author: James Agnew <jamesagnew@gmail.com>
Date:   Mon Jul 3 22:10:59 2017 -0400

    Continue refactor for HAPI 3

commit 9281ccafc3
Merge: ea1264cd8e 294d080bd3
Author: James Agnew <jamesagnew@gmail.com>
Date:   Mon Jul 3 20:34:16 2017 -0400

    Merge branch 'master' into hapi3_refactor

commit ea1264cd8e
Author: James <jamesagnew@gmail.com>
Date:   Wed Jun 28 10:26:01 2017 -0400

    Continue work on refactor

commit fbe2f98a02
Merge: b2bef47100 0a4dcc32ec
Author: James <jamesagnew@gmail.com>
Date:   Wed Jun 28 06:21:22 2017 -0400

    Merge branch 'master' into hapi3_refactor

commit b2bef47100
Author: James <jamesagnew@gmail.com>
Date:   Tue Jun 27 21:13:23 2017 -0400

    Work on refactor

commit 8f76e4e463
Author: James Agnew <jamesagnew@gmail.com>
Date:   Sun Jun 25 21:55:35 2017 -0400

    Lots of work on refactoring
2017-08-13 14:39:47 -04:00
James Agnew dedd3d635b Merge pull request #695 from SRiviere/#622
#622 Extension lost on ID datatype or extension of type primiti…
2017-08-13 10:03:58 -04:00
James Agnew 6efafe62f1 Merge pull request #688 from CarthageKing/bugfix-issue659
Correctly serialize baseurl/FooResource references
2017-08-12 14:51:46 -04:00
James 264be8f683 Fix test 2017-08-12 14:39:07 -04:00
James 1e659c65f2 Fix broken test 2017-08-12 06:32:46 -04:00
James Agnew 9901b802c4 Merge pull request #686 from SRiviere/Stu3_validation
Fix STU3 validation
2017-07-31 17:08:50 -04:00
James Agnew 274e218494 Fix #696: Corresctly handle negative numbers 2017-07-26 16:59:35 -04:00
James Agnew 6aa58cf887 Move tests in anticipation of HAPI 3 2017-07-26 16:59:35 -04:00
James Agnew 09e23d857f Move tests to DSTU3 module 2017-07-26 16:59:35 -04:00
Sebastien Riviere 0fd5a44b5e Fixed #622 Extension lost on ID datatype or extension of type primitive during parsing 2017-07-24 13:43:55 +02:00
Sebastien Riviere ecac0ffb5f Add junit test 2017-07-14 12:51:19 +02:00
James f7d4296046 Tweak to #683 2017-07-14 06:16:41 -04:00
James Agnew ef3f7202dc Merge pull request #683 from CarthageKing/bugfix-issue634
Correctly serialize STU3 ConceptMap and ActivityDefinition element order
2017-07-14 06:14:05 -04:00
James Agnew 1a6b3ea867 Work on #682 - Allow fewtching structure definitions by relative URL 2017-07-12 17:05:43 -04:00
James Agnew 0dacf8d82a Add test for #682 2017-07-12 15:39:33 -04:00
James Agnew 65cc41e376 Allow patch to proceed with AuthorizationInterceptor 2017-07-12 11:14:14 -04:00
michael.i.calderero 11aa1c5a9e fix for #659 2017-07-10 18:10:31 -05:00
michael.i.calderero 9aaa49dd94 add test to show issue #659 2017-07-10 14:35:06 -05:00
Sebastien Riviere a8e248036e Fix STU3 validation: find correct extension profile, use custom datatype profile, allow to disable terminology checks 2017-07-10 12:38:33 +02:00
michael.i.calderero d26fba161e remove '[x]' from paths in @ChildOrder annotation because they mess up
'forcedOrder' resolution in
BaseRuntimeElementCompositeDefinition.scanCompositeElementForChildren()
method
2017-07-03 16:06:52 -05:00
James Agnew c9fcef0372 Clean up handling of searches nested in batch and transaction 2017-06-30 16:20:32 -04:00
James Agnew 5789cd2a46 Merge branch 'master' of github.com:jamesagnew/hapi-fhir 2017-06-19 06:18:58 -04:00
James Agnew e6cb973f5f Add test 2017-06-17 08:29:30 -04:00
James b474a1f2ef Merge branch 'master' of github.com:jamesagnew/hapi-fhir 2017-06-16 10:00:27 -04:00
James 507cac3127 Respect prefer header on transaction processing 2017-06-16 09:52:12 -04:00
James Agnew 7588a2ecff Modify patch for #655 so that it fixes #604 without causing us to allow
invalid values
2017-06-09 16:30:20 -04:00
christian ohr 872d72629c #604:allow MINUTE precision for datetimes 2017-06-09 15:21:53 -04:00
James Agnew c2e5fa3f18 Fix #667 - When using the AuthorizationInterceptor with the JPA server, when a client is updating a resource from A to B, the user now needs to have write permission for both A and B 2017-06-09 11:48:17 -04:00
James 14edc79ac1 Version bump to 2.6-SNAPSHOT 2017-06-09 07:28:29 -04:00
James 8b5209ff67 Version bump to 2.5 2017-06-08 06:34:44 -04:00
James Agnew c04146a76a Revert "Allow MINUTE precision for datetimes. Closes #604" 2017-06-07 21:42:52 -04:00
James Agnew 1b557b05f0 Merge pull request #655 from ohr/master
Allow MINUTE precision for datetimes. Closes #604
2017-06-07 21:30:33 -04:00
James Agnew 7c6bb01a8b Don't allow JPA server to save duplicate or empty tags, and fix #664 by
preventing multiple threads from loading structure definitions for
validation at the same time
2017-06-06 16:44:13 -04:00
James Agnew 6168f4ab32 FIx JDK7 dep 2017-05-26 21:35:40 -04:00
James Agnew 7d659c88e5 Validator incorrectly rejected references where only an identifier was
populated
2017-05-26 21:32:12 -04:00
christian ohr aafde2eceb #604:allow MINUTE precision for datetimes 2017-05-26 15:27:58 +02:00
James Agnew 6cf3d865f0 Fix test 2017-05-25 16:06:44 -04:00
James Agnew b96932a5c5 Fix dependency on new version of commons-codec 2017-05-25 15:24:47 -04:00
James Agnew 5bdd10c7ab Include patient in $everything even if there are no other resources 2017-05-24 14:24:01 -04:00
James Agnew 45041830bc Server now respects the If-Modified-Since header for read operations 2017-05-17 14:57:05 -04:00
James Agnew a92d80d860 Correctly encode extensions on the root of a resource with type
reference
2017-05-17 12:40:10 -04:00
James Agnew 7f2faae85e Fix #563: JSON Parser gave a very unhelpful error message (Unknown attribute 'value' found during parse) when a scalar value was found in a spot where an object is expected. This has been corrected to include much more information 2017-05-15 18:06:55 -04:00
James Agnew 83c8036eda Fix broken test 2017-05-02 09:30:26 -04:00
James Agnew 11948a27d6 Ignore test that doesn't pass yet 2017-05-02 09:22:04 -04:00
James Agnew 1af36db7f7 Add unit test only 2017-05-02 09:20:45 -04:00
James bb9cd7c198 Add configuration property to DSTU3 FhirInstanceValidator to allow client code to change unknown extension handling behaviour. 2017-04-23 19:28:45 -04:00
James 716fa56b8f Merge branch 'jpa_perf_enhancements' 2017-04-21 06:30:22 -04:00
James cbc652d226 Version bump to 2.5-SNAPSHOT 2017-04-20 16:13:15 -04:00
James f01a1cb1e9 Fix #627 - Accidental rename of some codesystem files to text during
sync
2017-04-20 06:04:09 -04:00
James 9d3d15ce6f Version bump to 2.4 2017-04-19 21:38:36 -04:00
James 64fb9cfa68 Merge branch 'dstu3_latest_structs' 2017-04-18 22:12:53 -04:00
James 077676fd03 Bring DSTU3 structs up to FHIR R3
Squashed commit of the following:

commit 65b70d30c9
Author: James <jamesagnew@gmail.com>
Date:   Tue Apr 18 07:44:08 2017 -0400

    More work on bringing structs up to date

commit 1df2de0667
Author: James <jamesagnew@gmail.com>
Date:   Tue Apr 18 07:12:45 2017 -0400

    Working

commit 9a51323e03
Author: James <jamesagnew@gmail.com>
Date:   Mon Apr 17 22:18:24 2017 -0400

    Updates to STU3

commit 40aebba0a7
Author: James <jamesagnew@gmail.com>
Date:   Mon Apr 17 18:30:26 2017 -0400

    Fix regression caused by #610
2017-04-18 07:48:38 -04:00
James 1df2de0667 Working 2017-04-18 07:12:45 -04:00
James 9a51323e03 Updates to STU3 2017-04-17 22:18:24 -04:00
James 40aebba0a7 Fix regression caused by #610 2017-04-17 18:30:26 -04:00
James 6a5d0f95ae Add double-check for #610 2017-04-17 18:10:57 -04:00
James Agnew 9201692c70 Merge pull request #610 from dangerousben/init-race-condition
Fix FhirContext initialisation race condition.
2017-04-17 18:02:06 -04:00
James Agnew c66e147ec8 Merge pull request #613 from SRiviere/jaxrs-sever-evolution
Changing with stackTrace paramter without server restart
2017-04-17 17:56:33 -04:00
James Agnew 282e02801a Merge pull request #624 from CarthageKing/feature-make-bundle-fullurl-override-configurable
Feature make bundle fullurl override configurable
2017-04-17 17:46:45 -04:00
James Agnew 217d9f8176 More perf work 2017-04-16 14:46:15 -04:00
James Agnew 913fd422a1 Merge branch 'master' into jpa_perf_enhancements 2017-04-14 11:30:19 -04:00
James Agnew 15cc766000 Fix some compile issues 2017-04-14 11:27:37 -04:00
michael.i.calderero 125f9b4fed JsonParser tests for OverrideResourceIdWithBundleEntryFullUrl 2017-04-13 13:37:02 -05:00
michael.i.calderero b890bf3c75 XmlParser tests for OverrideResourceIdWithBundleEntryFullUrl 2017-04-13 12:09:31 -05:00
James Agnew 23b7de5dd8 More perf work 2017-04-12 18:28:10 -04:00
Sebastien Riviere e99495a83f Adding Unit tests to reproduce : Extension of Id Datatype and Extension of primitive extension lost during parsing/encoding #622 2017-04-12 10:00:32 +02:00
James Agnew 6ab1cb4c2e Fix compile issues from new version of errorprone 2017-04-03 14:43:59 -04:00
Ben Spencer 42819dba77 Fix FhirContext initialisation race condition. 2017-03-28 17:24:48 +01:00
James 40848b1beb Version bump to 2.4-SNAPSHOT 2017-03-18 12:24:39 -04:00
James e18ab206d7 Version bump to 2.3 2017-03-17 21:21:59 -04:00
James Agnew b59dd77bfc Fix compile error 2017-03-17 21:10:50 -04:00
James 8758b6f3da Updating to 1.9.0 structures
Squashed commit of the following:

commit 81edf46fe02a88851693f958e60855edfe69c04c
Author: James Agnew <jamesagnew@gmail.com>
Date:   Fri Mar 17 21:05:22 2017 -0400

    Work on converter

commit 3342d987008892dd3a75dddd251fe599c31c5a6c
Author: James <jamesagnew@gmail.com>
Date:   Fri Mar 17 08:40:37 2017 -0400

    Site updates

commit 7dcb63904ece1fcb59a09dc268e8382ac0b75535
Author: James <jamesagnew@gmail.com>
Date:   Fri Mar 17 08:36:39 2017 -0400

    STU3 structs working!

commit c5aec809e3f19f3fedf0aaaeab8cdd7924c144a2
Author: James <jamesagnew@gmail.com>
Date:   Fri Mar 17 07:05:54 2017 -0400

    Format test

commit 5033090010e8c93644505bccaa5e41ccbd756485
Author: James <jamesagnew@gmail.com>
Date:   Fri Mar 17 07:03:39 2017 -0400

    Merge tests for STU3

commit de40a516bfa4d2ab7f5e28e2d95815fde68bd10a
Merge: d5a5a60 899ed25
Author: James <jamesagnew@gmail.com>
Date:   Fri Mar 17 06:59:20 2017 -0400

    Merge branch 'master' into dstu3_latest_structs

commit d5a5a601b53d8be6712f0bfe37ba7e6eb4d3ce58
Author: James <jamesagnew@gmail.com>
Date:   Tue Mar 14 12:04:37 2017 -0400

    Latest fixes

commit ae46ad53d2075e66e3c58c1e626652b4e144f20c
Author: James <jamesagnew@gmail.com>
Date:   Tue Mar 14 06:51:59 2017 -0400

    STU3 structs passing

commit ec3b62d31131d303001f8574c58fb7a8b8194f68
Author: James Agnew <jamesagnew@gmail.com>
Date:   Sun Mar 12 22:20:05 2017 -0400

    Fix some tests

commit 933f9b08c32dd8671638f406a0966c5ee07d86a1
Author: James Agnew <jamesagnew@gmail.com>
Date:   Sun Mar 12 21:18:03 2017 -0400

    Fix test

commit 2a3ad0b422f58cfffea966a7005c6a3d86d189da
Author: James Agnew <jamesagnew@gmail.com>
Date:   Sun Mar 12 21:07:33 2017 -0400

    Resolve compile issues in STU3

commit fe04eba312a42c74b10a3971e4d61d58ba003bf9
Author: James Agnew <jamesagnew@gmail.com>
Date:   Sun Mar 12 20:51:35 2017 -0400

    FIx compilation error

commit 6c63a558c97cf176105967a84a0b32472c6c0fcb
Author: James Agnew <jamesagnew@gmail.com>
Date:   Sun Mar 12 20:48:13 2017 -0400

    Another STU3 struct fix

commit 6acd25458aad89aaff94768c824d4d1fcdac97ba
Author: James Agnew <jamesagnew@gmail.com>
Date:   Sun Mar 12 20:41:16 2017 -0400

    Work on STU3 structs

commit 90a476dba2665a129572ad5cbbd8dd29afd9d4c8
Author: James Agnew <jamesagnew@gmail.com>
Date:   Sun Mar 12 20:28:32 2017 -0400

    Resolve JDK8 dependencies

commit 783bc1519971e977fe7139aa1d3a2e7f37940a63
Author: James Agnew <jamesagnew@gmail.com>
Date:   Sun Mar 12 20:20:57 2017 -0400

    Fix some tests

commit 60c379175b689495e65278bb6a237af3de379aa8
Author: James <jamesagnew@gmail.com>
Date:   Sun Mar 12 19:56:29 2017 -0400

    Work on STU3 structs

commit e98c2eed6601f7009e199aca3b82399a3377077c
Author: James <jamesagnew@gmail.com>
Date:   Sun Mar 12 19:41:48 2017 -0400

    Work on DSTU3 structures

commit 3ce909212bf0f11561b8342d406cffcf957afeb3
Author: James <jamesagnew@gmail.com>
Date:   Tue Mar 7 21:03:14 2017 -0500

    Work up upgrading structs
2017-03-17 21:06:12 -04:00
James Agnew 45e4bd92ee Merge branch 'master' into jaxrs-sever-evolution 2017-03-16 22:04:55 -04:00
James 5282110f02 Tests for #142 2017-03-16 22:00:04 -04:00
James Agnew 01d102accc Correct handling of contained resources in a response for annotation
client
2017-03-01 17:23:31 -05:00
James f1828d1ca8 Fix handling of filters on valueset expansions 2017-02-10 11:05:59 -05:00
Sebastien Riviere c3447c3b4d Remove substitution string to use relative url, Fix client parser and custom extension. 2017-02-08 11:14:19 +01:00
James cb8492d353 Fix occasionally failing test 2017-02-07 20:10:06 -05:00
James a665aed85d Merge branch 'master' of github.com:jamesagnew/hapi-fhir 2017-02-07 07:01:59 -05:00
James b7f165019d Tweak re-indexing 2017-02-07 07:00:51 -05:00
James Agnew c836a8905e Add test for #551 2017-02-06 11:48:19 -05:00
Sebastien Riviere 3bf6555d61 Merge branch 'master' of https://github.com/jamesagnew/hapi-fhir into jaxrs-sever-evolution 2017-02-06 11:34:31 +01:00
James 7149d2e053 Merge branch 'custom_jpa_search_params' 2017-02-04 16:34:05 -05:00
James dd0e47afc3 Make projects import cleanly into eclipse 2017-02-04 16:31:18 -05:00
James Agnew 3f8a8cd8aa Merge pull request #548 from sekaijin/cleanup
Cleanup
2017-02-04 16:02:50 -05:00
James b4a362b8ee Work in progress 2017-02-01 05:55:35 -05:00
James b66aa9761e Allow parsing of RSQuot 2017-01-29 15:49:10 -05:00
sekaijin a150a96089 dependencies convergence
correct dependencies convergence
correct version use ${project.version}
2017-01-29 19:22:28 +01:00
sekaijin 23784c1619 remove .settings .project .classpath file of eclipse 2017-01-28 17:13:47 +01:00
Sebastien Riviere dabb3ea2c5 Merge branch 'master' of https://github.com/jamesagnew/hapi-fhir into jaxrs-sever-evolution
# Conflicts:
#	hapi-fhir-structures-dstu3/src/test/java/ca/uhn/fhir/parser/JsonParserDstu3Test.java
2017-01-27 10:16:43 +01:00
James 12598b4e3b Correctly handle declared extensions with multiple possible types
Squashed commit of the following:

commit d6ea0552b7
Author: James <jamesagnew@gmail.com>
Date:   Thu Jan 26 09:04:58 2017 -0500

    FIx test

commit e5876f7d86
Author: James <jamesagnew@gmail.com>
Date:   Thu Jan 26 08:35:38 2017 -0500

    Work on extensison

commit 7e573c2299
Author: James <jamesagnew@gmail.com>
Date:   Thu Jan 26 07:27:25 2017 -0500

    Work on extensions

commit 234b4a0c1c
Author: James Agnew <jamesagnew@gmail.com>
Date:   Thu Jan 26 06:25:47 2017 -0500

    More work on these extensison

commit 2eb780a690
Author: James Agnew <jamesagnew@gmail.com>
Date:   Wed Jan 25 22:35:57 2017 -0500

    Work on multitype extensions
2017-01-26 11:07:52 -05:00
James Agnew 589804d974 Add test 2017-01-24 13:57:15 -05:00
James Agnew 344e324929 Fix #544
Squashed commit of the following:

commit 1ab9b58e9f
Author: James Agnew <jamesagnew@gmail.com>
Date:   Tue Jan 24 10:46:56 2017 -0500

    Changes working now

commit 5c752cdace
Author: James <jamesagnew@gmail.com>
Date:   Tue Jan 24 08:43:04 2017 -0500

    Get JPA working with new uuid: logic

commit 127b76884a
Author: James Agnew <jamesagnew@gmail.com>
Date:   Mon Jan 23 21:11:18 2017 -0500

    Fix test

commit 599bbe236c
Author: James Agnew <jamesagnew@gmail.com>
Date:   Mon Jan 23 18:42:46 2017 -0500

    Work on #544
2017-01-24 10:47:24 -05:00
James Agnew d1542e98c5 JPA server was not correctly validating and expanding SCT codes 2017-01-19 17:37:43 -05:00
James Agnew 64e3435a8e Merge branch 'master' of github.com:jamesagnew/hapi-fhir 2017-01-19 15:50:48 -05:00
James Agnew e342d211d1 Add some logging and a test 2017-01-19 15:50:41 -05:00
Sebastien Riviere 13646168f0 Use the profile of the datatype if available, intead of the default hl7.org url 2017-01-19 14:55:42 +01:00
Sebastien Riviere cac44c736c Add the possibility to use the serverBaseUrl to generate the url of extension, if %BASE_SERVER_URL% is found 2017-01-19 14:54:17 +01:00
James 06f9d86bf1 Fix bad dependency 2017-01-18 22:26:10 -05:00
James Agnew b80897d16c Add warnign to DateType 2017-01-18 22:12:48 -05:00
James Agnew 322051a383 Fix failing tests 2017-01-14 07:55:42 -06:00
James Agnew dbc6abc658 Fix #504 - Error if custom type has illegal extensions 2017-01-13 21:46:16 -06:00
James Agnew fa1ad5ba85 Fix #519 - Issues with JPA capabilitystatement related to the _id param 2017-01-13 21:19:19 -06:00
James Agnew f9aa8c3ba4 Add test for #531 2017-01-13 11:35:15 -05:00
James b448e13edd Version bump to 2.3 2016-12-20 19:01:31 -05:00
James 0ec61533a8 Publish 2.2 2016-12-20 19:00:37 -05:00
James Agnew 750d6d4655 Switch public server to use CapabilityStatement for metadata return type 2016-12-20 15:35:54 -05:00
James 18e47c2130 More validator tests 2016-12-20 09:30:46 -05:00
James 964919d880 Improve parsing 2016-12-19 14:03:11 -05:00
James 88117f8d6e Port in changes from RI 2016-12-12 07:32:53 -05:00
James e30d478bf6 Add suggested test for #523 2016-12-12 07:25:10 -05:00
James ab17ee68a3 Revert IFhirVersion method signature changes for #520 2016-12-11 18:55:59 -05:00
James a2b24d4d07 Fix compile error 2016-12-11 18:27:10 -05:00
James Agnew 2bca44eb1e Merge pull request #523 from CarthageKing/master
ensure ElementDefinition properties with longer names are processed first in order to find the property that most matches the given nodeName
2016-12-11 18:12:46 -05:00
James 9cb014724b Add validator for DSTU2.1 2016-12-11 17:39:05 -05:00
James 901a85880c Update STU3 definitions and being in STU2.1 defs too 2016-12-10 19:51:25 -05:00
James b0d656e5d9 Refactor fix for #520 a bit so that version in DSTU3 is always pulled
from the model
2016-12-10 14:40:27 -05:00
James ee63bbea74 Fix #516 - Handle STU3 invalid enum values with an appropriate exception 2016-12-10 14:14:22 -05:00
James Agnew 0def3d5a72 Merge pull request #525 from aehrc/feature/parser_exception_handling
#516 Report invalid values for enums through parser error handler
2016-12-10 07:39:36 -05:00
James 5149e581db Fix #521 - Wrong or missing ID body in update should be an error 2016-12-08 08:31:52 -05:00
Michael Lawley a9a3507544 #516 Report invalid values for enums through parser error handler 2016-12-06 10:32:23 +10:00
michael.i.calderero 7a203fa7d5 ensure ElementDefinition properties with longer names are processed
first in order to find the property that most matches the given nodeName
2016-12-02 21:42:09 -06:00
James Agnew a9d7b8d636 Add test and credit for #518 2016-11-25 18:28:18 -05:00
James Agnew 81773de261 Fix #276 - Prevent contained resources being encoded as duplicates 2016-11-25 17:18:57 -05:00
jamesagnew 69871bb8c2 Improve testing on CorsInterceptor 2016-11-24 19:25:37 -05:00
James 233e979963 Fix build 2016-11-22 06:33:20 -05:00
James Agnew 888f42a032 Introduce new CORS interceptor and switch examples to use it 2016-11-21 18:30:51 +01:00
James Agnew 03935be97f Work on common FluentPath interface 2016-11-21 15:52:17 +01:00
James Agnew 5846ce4518 Make the parser configurable so that when parsing an invalid empty value (e.g. {"status":""} parser will either throw a meaningful exception or log a warning depending on the configured error handler. 2016-11-21 14:48:44 +01:00
James Agnew bf35f7e4b2 Fix #495 - Auto-detect DSTU3 mode when those resources are on classpath 2016-11-21 13:44:54 +01:00
James Agnew ba896e2553 Clean up CORS 2016-11-21 13:37:59 +01:00
James Agnew 72a62817aa Improve detection for #477 2016-11-15 05:54:56 -05:00
James Agnew 4252415e9c Fix #477 - Gracefully handle unexpected elements starting with _ 2016-11-15 05:44:45 -05:00
James 2d7592f7a8 Version bump to 2.2-SNAPSHOT 2016-11-11 22:39:45 -05:00
James 2dd26b6367 Version bump to 2.1 2016-11-11 15:16:53 -05:00
James Agnew a03805a6d4 Clean up patch client 2016-11-11 15:08:16 -05:00
James a5d5d3e031 Bump FHR version 2016-11-06 17:34:13 -05:00
James 8c53ad24f7 Clean up authorization interceptor tests 2016-11-03 08:10:54 -04:00
James 3a5a771de7 Fix #484 - Correctly parse resources containing an empty div tag as the narrative 2016-11-03 07:51:11 -04:00
James Agnew f5bec16cb4 Fix tests for #472 2016-10-26 14:10:43 -04:00
James Agnew a67171e231 Fix #472 - Wrong header being returned (Content-Location instead of
Location) on STU3 server
2016-10-26 12:12:19 -04:00
James Agnew f80bf98dcd Fix #327 - Correctly serialize JSON extension with a reference to a
contained resource
2016-10-14 16:36:29 -04:00
James Agnew e56c75e80c Switch Android library to use OkHttp by default 2016-10-14 16:15:27 -04:00
James Agnew deae820ebe Fix up comnpile issue 2016-10-12 15:29:40 -04:00
James Agnew 97cd78e6bf Fix #454 - Chinese characters were not being correctly normalized 2016-10-12 12:50:56 -04:00
James Agnew 11d3ae9447 Fix #411 - Searching by POST with urlencoded parameters doesn't work if
interceptors are accessing the parameters and there is are also
parameters on the URL
2016-10-06 13:23:32 -04:00
James Agnew f5eda76388 Use new STU3 mimetypes by default 2016-10-06 12:17:59 -04:00
James Agnew 1fd881d8f8 Return an error if a parameter is called with a chain even though it
doesn't support chaining
2016-10-04 17:02:13 -04:00
James Agnew 26cd316343 Fix #414: Parser should not choke with a NullPointerException if it
encounters an extension without a URL
2016-09-30 17:35:29 -04:00
James Agnew 8b80d932da Fix #443 - XhtmlNode.equalsDeep() did not work 2016-09-29 15:00:01 -04:00
James Agnew 5da1d22d02 Docs 2016-09-28 17:04:55 -04:00
James Agnew 8a9a031a8d Fix uploading CLI DSTU2 examples 2016-09-28 16:25:01 -04:00
James Agnew 090f079442 Try to fix race conditions in tests 2016-09-26 12:56:37 -04:00
James Agnew cb31e706c7 Add test for #411 2016-09-26 10:50:04 -04:00
James 714adcd4be Merge branch 'master' of github.com:jamesagnew/hapi-fhir 2016-09-22 21:55:11 -04:00
James 3428aa40f3 Logging changes 2016-09-22 21:55:05 -04:00
James Agnew 3d73aad275 Fix unit tests 2016-09-21 16:58:57 -04:00
James Agnew ae97165a0a Add interceptor method on server which will be called after all other
processing
2016-09-18 16:08:16 -04:00
James Agnew b20a5e6b90 Bundles for history did not validate 2016-09-18 10:28:24 -04:00
James Agnew 40286f49c2 Merge branch 'patch' of github.com:jamesagnew/hapi-fhir into patch 2016-09-17 23:40:54 -04:00
James Agnew 1343badba4 Working on patch 2016-09-17 13:40:03 -04:00
James Agnew 364c18e06e Use more compatible Accept header in STU3 client. Also fixes missing
Woodstox library in android builds per #450)
2016-09-16 23:46:06 -04:00
James Agnew f92c5a7232 Fix #446 - Don't give child resources the ID of the parent 2016-09-16 15:01:14 -04:00
James Agnew 12790d385c Fix #445 - Server was using the wrong mimetype for conf statement 2016-09-16 13:25:03 -04:00
James Agnew a2ffc6af05 Fix #444 - Correct handling of parsing milliseconds in dates before 1970 2016-09-09 18:18:28 -04:00
James Agnew d41b412dee Fix #440 - Don't depend on Saxon 2016-09-08 15:56:15 -04:00
James Agnew 202a1ea885 Fix web testing UI regression 2016-09-06 17:59:04 -04:00
James Agnew 98e0753b93 Properly add include resources 2016-08-30 16:38:09 -04:00
James Agnew 906bcfb803 Version bump to 2.1 2016-08-30 10:55:55 -04:00
James Agnew d27aad487e Bump to 2.0 release 2016-08-30 10:50:04 -04:00
James 333aa0afde Correctly update versions on transactipn update 2016-08-28 22:56:59 -04:00
James ddc0abe4ed Update to final STU3 ballot definitions 2016-08-26 07:55:10 -04:00
James Agnew a1105fac1e Merge branch 'master' of github.com:jamesagnew/hapi-fhir 2016-08-25 18:27:32 -04:00
James Agnew 17940b8a24 Improve performance when parsing contained resources 2016-08-25 17:41:33 -04:00
James acdbdc0be7 Fix #426 - Extension with datatype of ID failed to parse 2016-08-25 07:32:37 -04:00
James Agnew c4d302df8d Upgrade to Thymeleaf 3 2016-08-23 19:11:49 -04:00
James Agnew 82da79cd5f Add a new test 2016-08-23 13:49:31 -04:00
James Agnew cc6c32f987 Fix tests 2016-08-22 09:43:01 -04:00
James Agnew 7f15520db8 Don't include Location header in server responses for DSTU3 servers 2016-08-21 11:39:44 -07:00
James Agnew da8abca1ff Add custom extension example 2016-08-21 10:24:42 -07:00
James Agnew 379abb8e47 Don't strip urn: prefixes from references when encoding 2016-08-16 11:23:07 -07:00
James Agnew eee168ced6 Add support for conditional operations to AuthorizationInterceptor 2016-08-15 13:35:50 -04:00
James b0d19c3a65 Fix #423 - Encode custom types with custom type fields correctly 2016-08-14 13:05:16 -04:00
James Agnew 8354f4b565 Use correct accept header 2016-08-05 18:39:44 -04:00
James Agnew 74950a4efc Fix regression when parsing contained resources 2016-08-05 18:01:44 -04:00
James Agnew a3f4864bd6 Merge branch 'master' of github.com:jamesagnew/hapi-fhir 2016-08-05 12:37:06 -04:00
James Agnew 3e7cd153fd Update DSTU3 definitions to latest 2016-08-05 12:36:41 -04:00
jamesagnew 545b359697 Fix #406 - Allow arbitrary authentication realm 2016-08-01 21:36:50 -04:00
James Agnew dd8b1cd979 Use corrrect types from client 2016-07-27 18:15:09 -04:00
jamesagnew 7dbd5a21ca Fix tests 2016-07-24 09:20:54 -04:00
jamesagnew a9b29d5088 Merge branch 'master' of github.com:jamesagnew/hapi-fhir 2016-07-23 18:51:08 -04:00
jamesagnew 350e82b6cf Fix #403 - Allow references to keep versions when encoding 2016-07-23 18:48:00 -04:00
James Agnew 748c13d0dc Remove bad dependency 2016-07-22 18:33:16 -04:00
James Agnew 7bea8431f7 Add interceptor for rejecting TRACE and other invalid verbs 2016-07-19 19:16:09 -04:00
jamesagnew 5073692eda Always include SUBSETTED tag when _elements is used on server 2016-07-18 07:05:11 -04:00
jamesagnew 196c11bfa2 Use new style mimetypes but keep supportuing the old ones as well 2016-07-17 18:35:06 -04:00
jamesagnew ef1c81e241 Fix #150 - Don't encode null fluent client values 2016-07-14 07:18:48 -04:00
James Agnew 0b69367b11 Merge branch 'master' of github.com:jamesagnew/hapi-fhir 2016-07-13 09:22:19 -04:00
jamesagnew 5b46e9655a Fix compile errors 2016-07-13 07:59:08 -04:00
jamesagnew fa37afb61f Merge branch 'master' of github.com:jamesagnew/hapi-fhir 2016-07-12 21:44:52 -04:00
jamesagnew ed941a116b Update to use GSON 2016-07-12 21:44:40 -04:00
James Agnew c550681aeb Update defs to 1.5.0 versions 2016-07-12 18:29:10 -04:00
James Agnew c3e9f618eb Version bump to 2.0-SNAPSHOT 2016-07-12 11:12:07 -04:00
jamesagnew acaf2135c5 Finalize 1.6 release 2016-07-06 07:29:20 -04:00
James Agnew 74feb38085 Fix test regression 2016-07-05 17:30:14 -04:00
James Agnew d63e289cbe Validation fixes 2016-07-05 16:56:06 -04:00
James Agnew 9226e43090 Fix tests 2016-07-05 09:57:55 -04:00
James Agnew a8585c881d Fix #396 - Make tests timezone independent 2016-07-04 13:48:05 -04:00
jamesagnew 32bdd14639 Work on term service 2016-07-02 17:14:36 -04:00
jamesagnew 4a49e5b7f9 Merge branch 'master' of github.com:jamesagnew/hapi-fhir 2016-07-01 14:31:25 -04:00
James Agnew 38d30eef49 Respect order for order=REPLACE_PARENT 2016-06-29 10:26:36 -04:00
James Agnew 1eb1dc7e36 Merge branch 'master' of github.com:jamesagnew/hapi-fhir 2016-06-29 09:56:12 -04:00
James Agnew ea99672e6c Add tests for term svc 2016-06-29 09:56:05 -04:00
jamesagnew 9b6f548970 Work on term service, and allow child classes when serializing 2016-06-29 08:08:42 -04:00
James Agnew d7fdaf7618 Add custom type test 2016-06-27 17:51:08 -04:00
jamesagnew e9cb518012 Fix teerm sevice indexing 2016-06-26 23:10:02 -04:00
James Agnew b84150ff5e Randomly set locale after each test in order to make sure we aren't
dependent on a specific environment
2016-06-21 09:53:24 -04:00
James Agnew 0d65ec3f4e Fix test that fails on Windows 2016-06-21 09:44:42 -04:00
James Agnew 89f3df80a4 Merge branch 'master' of github.com:jamesagnew/hapi-fhir 2016-06-20 10:53:43 -04:00
James Agnew 102548d22c Fix decimaltype float constructor 2016-06-20 10:52:23 -04:00
jamesagnew a7cbb5c022 More test coverage 2016-06-18 13:32:45 -04:00
jamesagnew b3d8d453de Improve test coverage and clean up UnclassifiedServerFailureException processing 2016-06-18 10:37:43 -04:00
jamesagnew 785ce1deb9 Remove some dead code and improve test coverage 2016-06-17 07:40:17 -04:00
jamesagnew dcecde5db9 Improve test coverage 2016-06-16 22:52:10 -04:00
jamesagnew c9f85111ab Add some tests to GenericClient 2016-06-16 07:42:06 -04:00
James Agnew 1683cf8cef Switch to jacoco 2016-06-15 17:34:50 -04:00
James Agnew f3dcc3e893 Add lots of tests 2016-06-14 17:57:08 -04:00
James Agnew 1166a2ee67 Work on support for _at parameter in history operation 2016-06-13 07:31:25 -05:00
James Agnew 23550240ad Fix #378 - Include mandatory elements in server generated
OperationDefinition resources
2016-06-11 15:28:58 -05:00
James Agnew 8f1e45b3f3 Fix #379 - Server generated OperationDefinitions should generate
separate definitions for operations that are implemented against
multiple resource types
2016-06-11 14:46:13 -05:00
James Agnew fd8d67b9cd Fix more unit tests for #380 2016-06-10 18:57:44 -05:00
James Agnew 035ed27dab Fix #380 - Correct cardinality for OperationDefinitions 2016-06-10 17:15:16 -05:00
James Agnew 189038ad08 Fix #267 2016-06-10 10:49:51 -05:00
James Agnew a3484f84c1 Work on #381 - Still need to apply these changes to STU3 type 2016-06-09 21:48:53 -04:00
James Agnew 8dc4eaf0e0 More validator fixes 2016-06-08 16:17:09 -07:00
James Agnew 338e83e4e8 Fix build 2016-06-08 15:35:08 -07:00
James Agnew 0a2b4290ed Fix #370 - Validation failure when validating certain STU3 resources 2016-06-08 14:21:18 -07:00
James Agnew 7e57aed5d6 Significant performance enhancements for context startup 2016-06-06 11:15:11 -07:00
James Agnew 99568a4b30 Clean up client fluent param types and add some test coverage 2016-06-05 11:33:43 -04:00
James Agnew 87eabe6bf8 More work on terminology server 2016-06-05 09:40:06 -04:00
James Agnew d966190f9e Fix #371 - STU3 server and client should use new sort parameter style 2016-06-04 12:34:44 -04:00
jamesagnew f4b9c6423c Work on terminology service 2016-06-04 12:16:33 -04:00
jamesagnew 9fc6272951 Merge branch 'master' of github.com:jamesagnew/hapi-fhir 2016-06-03 08:16:58 -04:00
jamesagnew 32cebb2a9f More terminology service work 2016-06-03 08:16:40 -04:00
James Agnew e011f6a843 Add tests for #372 2016-06-02 21:45:02 -04:00
James Agnew 39a96f0258 Fix #374 - Include ETag and Last-Modified headers in response 2016-05-31 13:44:21 -04:00
jamesagnew a2954ef181 Fix build 2016-05-30 06:57:01 -04:00
James Agnew f45ad117fe Improve error messages for invalid validate request 2016-05-29 22:23:30 -04:00
James Agnew 9fe9cc1e4c Sync RI and fix tests 2016-05-29 17:52:26 -04:00
James Agnew eb3b656a5f Syn RI - Build still failing :( 2016-05-28 12:53:59 -04:00
jamesagnew eae96983e8 Merge branch 'master' of github.com:jamesagnew/hapi-fhir 2016-05-28 10:37:27 -04:00
jamesagnew e1e6a0d5b0 Sync model with RI latest version 2016-05-28 10:35:08 -04:00
James Agnew a5debc07a3 DateTime parser incorrectly parsed times where more than 3 digits of
precision were provided on the seconds
after the decimal point
2016-05-25 19:20:51 -04:00
jamesagnew 35ffbf1568 Sync DSTU2 validator with RI 2016-05-24 09:22:16 -04:00
jamesagnew efe9cd1dd1 Work on term svc 2016-05-24 06:34:06 -04:00
jamesagnew ee031667c5 Fix #369 - FhirTerser cloneInto method fails if target contains extension 2016-05-23 09:20:40 -04:00
jamesagnew 20b6994cc8 Fix #364 - Allow serializing custom types that contain custom datatypes 2016-05-21 14:35:10 -04:00
jamesagnew 021025ffa9 Fix #366 - Return HTTP 400 instead of 500 when boolean values contain invalid string 2016-05-21 13:07:46 -04:00
James Agnew 7942d69d5d Accept conditional updates with _id as parameter 2016-05-16 19:11:25 -04:00
James Agnew d5e2170595 Don't discard _count from parameters when method has @Count 2016-05-13 19:13:39 -04:00
James Agnew 563f4e4c46 Treat date eq params correctly 2016-05-13 18:49:41 -04:00
James Agnew 84a7856c19 Treat missing ID in resource body as warning 2016-05-13 18:04:07 -04:00
James Agnew abd8bc2f14 Work on term svc 2016-05-13 17:40:56 -04:00
James Agnew c94f4bb19b Work on term services 2016-05-11 06:30:45 -04:00
James Agnew 3e77d3e37e Add _has support (this is an experimental parameter being tested) 2016-05-10 11:47:30 -04:00
James Agnew bca8589177 Index DSTU3 timing datatypes 2016-05-09 16:32:31 -04:00
James Agnew 975dfe4fa4 Fix build 2016-05-09 13:10:12 -04:00
James Agnew 061243b5c7 Allow delete bundle to contain multiple deletes for the same resource 2016-05-08 13:11:55 -04:00
James Agnew dbcc2ce25a Fix build 2016-05-08 11:01:17 -04:00
James Agnew e1ab2856e0 Fix build 2016-05-08 10:29:08 -04:00
James Agnew 81cb769d18 Allow operation names to be escaped in URL 2016-05-07 19:28:36 -04:00
James Agnew adeb15809b Fix validator for documents 2016-05-07 16:47:34 -04:00
James Agnew af2b702aa4 Fixes from Montreal connectathon 2016-05-07 14:24:33 -04:00
James Agnew fd2671d28e Fix validation issue 2016-05-06 17:44:23 -04:00
James Agnew 87f12bf197 Merge pull request #356 from euvitudo/scp-update-for-operationdefinition
Updated ServerConformanceProvider and test
2016-05-05 07:04:27 -04:00
James Agnew 82c1e687fd Fix NPE in LoggingInterceptor 2016-05-04 11:48:50 -04:00
jamesagnew 244cad6224 Allow validator exceptions to be ignored via confoguration 2016-05-03 21:58:09 -04:00
James Agnew 804b271764 Fix test 2016-05-03 10:39:29 -04:00
jamesagnew dcd32b6127 Correctly handle search parameter target types in JPA 2016-05-03 07:03:44 -04:00
James Agnew dd95a52240 Get fluentpath entirely working in JPA 2016-05-02 18:04:42 -04:00
James Agnew 804149205a Work on getting tests passing 2016-05-02 11:42:55 -04:00
jamesagnew 5086145132 Add targets to search parameters 2016-05-02 08:10:43 -04:00
jamesagnew 27ec35338a Update to latest structure defs and validator 2016-05-01 21:31:14 -04:00
jamesagnew 4f717661ad Update datatypes 2016-05-01 10:31:02 -04:00
jamesagnew 9b55d0000b Fix #354 - Bring back setFoo(List) and getFooFirstRep() methods to DSTU3 structures 2016-05-01 10:19:50 -04:00
jamesagnew e3e81ff202 Fix #352 - Client should auto download resource if server ignores prefer header 2016-05-01 09:30:12 -04:00
Phillip Warner 8e6a78d6ff Updated ServerConformanceProvider and test
ServerConformanceProvider only placed a string reference to
OperationDefinitions, which were nowhere to be found in the Conformance
statement.  With this change, SCP assigns a reference containing the
OperationDefinition for each operation.  The OperationDefinitions are, per the
spec, located in the 'contained' portion of the Conformance statement.
2016-04-29 12:57:41 -06:00
jamesagnew 3fce4cb087 Fix #344 - make getResourceDefinition(String) and getElementDefnition(String) case insensitive 2016-04-25 07:19:31 -04:00
jamesagnew f29cda00d0 Add test for #341 2016-04-24 21:55:55 -04:00
jamesagnew 9631160942 Add unit test 2016-04-23 18:43:11 -04:00
jamesagnew 3ceac6d576 Add test for #347 2016-04-23 18:19:30 -04:00
jamesagnew 3eb805fb0a Respect _format=application/xml+fhir 2016-04-23 12:17:27 -04:00
jamesagnew d76e0008ac Fix #342 - The HTTP 400 if request fail to parse 2016-04-22 07:19:57 -04:00
jamesagnew 38e80531bb Bump version to 1.6-SNAPSHOT 2016-04-22 07:05:05 -04:00
jamesagnew dd3f1dd33c Fix #345 - ResponseValidatingInterceptor throws an exception with response has no content 2016-04-22 07:04:14 -04:00
jamesagnew 8b59b61250 Release docs 2016-04-20 07:03:30 -04:00
jamesagnew 3a0de6e6f8 Fix #339 - Disable XXE XML parsing vulnerability 2016-04-19 07:55:24 -04:00
jamesagnew 43969cb8ce Fix tests on CLI 2016-04-19 06:35:15 -04:00
jamesagnew 846e216c04 Fix tests 2016-04-17 12:58:36 -04:00
jamesagnew 5a818a38e8 FIx tests 2016-04-17 10:49:16 -04:00
jamesagnew 1af65ff5a8 Fix #335 (also fixes #336) - Correctly parse and serialize IDs on elements within a resource 2016-04-17 10:12:34 -04:00
jamesagnew 72640dc720 Correct encoding order for DSTU2 resources 2016-04-14 07:53:37 -04:00
jamesagnew 81dec23faf Correctly populate Bundle.entry.fullUrl on Hl7OrgDstu2 servers 2016-04-14 06:59:43 -04:00
James Agnew a090f5481f Try to get cobertura working 2016-04-13 10:33:58 -04:00
James Agnew fe0824fd7c Disable fake test 2016-04-11 16:05:25 -04:00
James Agnew f616c22429 Fix cobertura fails 2016-04-11 14:53:38 -04:00
jamesagnew d7c683f6b9 Merge branch 'master' of github.com:jamesagnew/hapi-fhir 2016-04-11 09:08:34 -04:00
jamesagnew 2f37015d57 Clean up parsers so that elements are always encoded according to their order in the structures that contain them 2016-04-11 08:36:12 -04:00
James Agnew 88157fe1a6 Test data uploader fixes 2016-04-08 16:31:42 -04:00
jamesagnew 5cd13bc73f Improve error logging when the wrong version structure is passed into a parser 2016-04-07 13:55:38 -04:00
jamesagnew e30ebf69ba Fix #325 - Fix equalsShallow and equalsDeep when a field is null on one side and empty on the other 2016-04-05 22:05:45 -04:00
James Agnew 39fc134482 Fix #326 - Correctly serialize DSTU3 references in JsonParser. Thanks to
@fw060 for the patch!
2016-04-05 16:33:29 -04:00
jamesagnew 079f966086 Parser enhancements when parsing bundles 2016-04-05 08:59:24 -04:00
jamesagnew a4066b1de5 Fix build 2016-04-03 18:57:34 -04:00
jamesagnew 45390ebc89 Don't parse 1974-12-25+10:00 as this is not a valid FHIR time 2016-04-03 18:45:08 -04:00
jamesagnew 20e04a7c80 Merge branch 'dstu3_structs' 2016-04-03 18:16:02 -04:00
jamesagnew 18b3d0df65 Update to DSTU3 Montreal definitions 2016-04-03 18:14:31 -04:00
jamesagnew 6d0dcc0213 More work on auth module 2016-04-02 08:59:01 -04:00
James Agnew 57abd0a3bb New structures 2016-04-01 18:10:02 -04:00
James Agnew c345209ce4 Fix #318 - Apply setDefaultTypeForProfile to contained resources 2016-04-01 17:10:49 -04:00
jamesagnew bb96ae4e25 Fix build 2016-03-29 08:36:08 -04:00
James Agnew 46ba27ec8f Work on security interceptor 2016-03-28 20:51:27 -04:00
James Agnew b2f11e0bfc Fix #317 - Allow search params to be used when doing REST operations 2016-03-26 13:44:54 -04:00